RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ZFYVE16Q7Z3T8 1539 aa32.81■■■□□ 2.84
LINC00543-201ENST00000567234 SPAG9O60271 1321 aaKnown RBP32.81■■■□□ 2.84
LINC00543-201ENST00000567234 POGZQ7Z3K3 1410 aa32.8■■■□□ 2.84
LINC00543-201ENST00000567234 INO80Q9ULG1 1556 aaPredicted RBP32.79■■■□□ 2.84
LINC00543-201ENST00000567234 ZNF518AQ6AHZ1 1483 aa32.77■■■□□ 2.84
LINC00543-201ENST00000567234 EIF4G2P78344 907 aaKnown RBP eCLIP32.77■■■□□ 2.84
LINC00543-201ENST00000567234 DDX10Q13206 875 aaKnown RBP32.77■■■□□ 2.84
LINC00543-201ENST00000567234 HIRIP3Q9BW71 556 aaPredicted RBP32.77■■■□□ 2.84
LINC00543-201ENST00000567234 ATP7AQ04656 1500 aa32.76■■■□□ 2.83
LINC00543-201ENST00000567234 RAPGEF3O95398 923 aa32.75■■■□□ 2.83
LINC00543-201ENST00000567234 NBPF8Q3BBV2 869 aa32.74■■■□□ 2.83
LINC00543-201ENST00000567234 RICTORQ6R327 1708 aa32.74■■■□□ 2.83
LINC00543-201ENST00000567234 KDM5CP41229 1560 aa32.74■■■□□ 2.83
LINC00543-201ENST00000567234 KIDINS220Q9ULH0 1771 aa32.73■■■□□ 2.83
LINC00543-201ENST00000567234 HSPA5P11021 654 aaKnown RBP32.72■■■□□ 2.83
LINC00543-201ENST00000567234 FRMPD1Q5SYB0 1578 aa32.69■■■□□ 2.82
LINC00543-201ENST00000567234 UHRF1BP1Q6BDS2 1440 aa32.69■■■□□ 2.82
LINC00543-201ENST00000567234 MYT1LQ9UL68 1186 aa32.68■■■□□ 2.82
LINC00543-201ENST00000567234 TRHP20396 242 aaPredicted RBP32.66■■■□□ 2.82
LINC00543-201ENST00000567234 HECW2Q9P2P5 1572 aa32.66■■■□□ 2.82
LINC00543-201ENST00000567234 ATP10AO60312 1499 aa32.66■■■□□ 2.82
LINC00543-201ENST00000567234 DEPDC5O75140 1603 aa32.65■■■□□ 2.82
LINC00543-201ENST00000567234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.63■■■□□ 2.81
LINC00543-201ENST00000567234 EIF2AK4Q9P2K8 1649 aaKnown RBP32.62■■■□□ 2.81
LINC00543-201ENST00000567234 CCDC144AA2RUR9 1427 aa32.62■■■□□ 2.81
LINC00543-201ENST00000567234 SPATA31E1Q6ZUB1 1445 aa32.62■■■□□ 2.81
LINC00543-201ENST00000567234 MLH3Q9UHC1 1453 aa32.61■■■□□ 2.81
LINC00543-201ENST00000567234 PLA2R1Q13018 1463 aa32.6■■■□□ 2.81
LINC00543-201ENST00000567234 COL17A1Q9UMD9 1497 aaPredicted RBP32.6■■■□□ 2.81
LINC00543-201ENST00000567234 YTHDC1Q96MU7 727 aaKnown RBP32.58■■■□□ 2.81
LINC00543-201ENST00000567234 POLR1AO95602 1720 aaPredicted RBP32.58■■■□□ 2.81
LINC00543-201ENST00000567234 ABCA6Q8N139 1617 aa32.58■■■□□ 2.81
LINC00543-201ENST00000567234 RALGAPBQ86X10 1494 aa32.56■■■□□ 2.8
LINC00543-201ENST00000567234 DHX29Q7Z478 1369 aaKnown RBP32.54■■■□□ 2.8
LINC00543-201ENST00000567234 WASHC2AQ641Q2 1341 aa32.53■■■□□ 2.8
LINC00543-201ENST00000567234 VWDEQ8N2E2 1590 aa32.52■■■□□ 2.8
LINC00543-201ENST00000567234 ZMYM4Q5VZL5 1548 aa32.51■■■□□ 2.8
LINC00543-201ENST00000567234 YEATS2Q9ULM3 1422 aa32.51■■■□□ 2.8
LINC00543-201ENST00000567234 DIP2CQ9Y2E4 1556 aa32.5■■■□□ 2.79
LINC00543-201ENST00000567234 TET3O43151 1660 aa32.5■■■□□ 2.79
LINC00543-201ENST00000567234 E9PCH4 1651 aa32.49■■■□□ 2.79
LINC00543-201ENST00000567234 ANP32CO43423 234 aa32.49■■■□□ 2.79
LINC00543-201ENST00000567234 A2MP01023 1474 aa32.47■■■□□ 2.79
LINC00543-201ENST00000567234 KANK1Q14678 1352 aa32.47■■■□□ 2.79
LINC00543-201ENST00000567234 PRDM15P57071 1507 aaPredicted RBP32.46■■■□□ 2.79
LINC00543-201ENST00000567234 CCER2I3L3R5 266 aa32.46■■■□□ 2.79
LINC00543-201ENST00000567234 CCDC7Q96M83 1385 aa32.46■■■□□ 2.79
LINC00543-201ENST00000567234 DCAF11Q8TEB1 546 aa32.44■■■□□ 2.78
LINC00543-201ENST00000567234 USP47Q96K76 1375 aa32.42■■■□□ 2.78
LINC00543-201ENST00000567234 ZNF326Q5BKZ1 582 aaKnown RBP32.42■■■□□ 2.78
LINC00543-201ENST00000567234 SPHKAPQ2M3C7 1700 aa32.41■■■□□ 2.78
LINC00543-201ENST00000567234 MROH1Q8NDA8 1641 aa32.41■■■□□ 2.78
LINC00543-201ENST00000567234 TRPM2O94759 1503 aa32.41■■■□□ 2.78
LINC00543-201ENST00000567234 PTPRTO14522 1441 aa32.4■■■□□ 2.78
LINC00543-201ENST00000567234 KIF3BO15066 747 aa32.4■■■□□ 2.78
LINC00543-201ENST00000567234 PRAG1Q86YV5 1406 aa32.38■■■□□ 2.77
LINC00543-201ENST00000567234 CNTLNQ9NXG0 1405 aa32.38■■■□□ 2.77
LINC00543-201ENST00000567234 TRPM1Q7Z4N2 1603 aa32.37■■■□□ 2.77
LINC00543-201ENST00000567234 RNF17Q9BXT8 1623 aaKnown RBP32.37■■■□□ 2.77
LINC00543-201ENST00000567234 C11orf95C9JLR9 678 aaPredicted RBP32.36■■■□□ 2.77
LINC00543-201ENST00000567234 KDM2AQ9Y2K7 1162 aa32.35■■■□□ 2.77
LINC00543-201ENST00000567234 BCORL1Q5H9F3 1711 aa32.35■■■□□ 2.77
LINC00543-201ENST00000567234 ARID4BQ4LE39 1312 aaPredicted RBP32.34■■■□□ 2.77
LINC00543-201ENST00000567234 CEP152O94986 1710 aa32.34■■■□□ 2.77
LINC00543-201ENST00000567234 CARD11Q9BXL7 1154 aa32.32■■■□□ 2.76
LINC00543-201ENST00000567234 LMTK2Q8IWU2 1503 aa32.32■■■□□ 2.76
LINC00543-201ENST00000567234 KIF7Q2M1P5 1343 aa32.31■■■□□ 2.76
LINC00543-201ENST00000567234 LAMC1P11047 1609 aa32.31■■■□□ 2.76
LINC00543-201ENST00000567234 SIGLEC1Q9BZZ2 1709 aa32.29■■■□□ 2.76
LINC00543-201ENST00000567234 NEURL4Q96JN8 1562 aa32.29■■■□□ 2.76
LINC00543-201ENST00000567234 ARHGEF40Q8TER5 1519 aa32.28■■■□□ 2.76
LINC00543-201ENST00000567234 RGL3Q3MIN7 710 aa32.27■■■□□ 2.76
LINC00543-201ENST00000567234 GPRASP1Q5JY77 1395 aa32.27■■■□□ 2.76
LINC00543-201ENST00000567234 STAC3Q96MF2 364 aa32.26■■■□□ 2.76
LINC00543-201ENST00000567234 ROCK2O75116 1388 aaKnown RBP32.26■■■□□ 2.76
LINC00543-201ENST00000567234 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.75
LINC00543-201ENST00000567234 CLTCL1P53675 1640 aa32.25■■■□□ 2.75
LINC00543-201ENST00000567234 GGT6Q6P531 493 aa32.22■■■□□ 2.75
LINC00543-201ENST00000567234 REREQ9P2R6 1566 aa32.2■■■□□ 2.74
LINC00543-201ENST00000567234 MADDQ8WXG6 1647 aa32.13■■■□□ 2.73
LINC00543-201ENST00000567234 KIF1BO60333 1816 aa32.13■■■□□ 2.73
LINC00543-201ENST00000567234 ST20-MTHFSA0A0A6YYL1 179 aa32.12■■■□□ 2.73
LINC00543-201ENST00000567234 SUPT16HQ9Y5B9 1047 aaKnown RBP32.11■■■□□ 2.73
LINC00543-201ENST00000567234 AGLP35573 1532 aa32.11■■■□□ 2.73
LINC00543-201ENST00000567234 ABCC3O15438 1527 aa32.08■■■□□ 2.73
LINC00543-201ENST00000567234 NBPF1Q3BBV0 1214 aa32.07■■■□□ 2.73
LINC00543-201ENST00000567234 PRKRIP1Q9H875 184 aaPredicted RBP32.06■■■□□ 2.72
LINC00543-201ENST00000567234 KIAA1210Q9ULL0 1709 aa32.04■■■□□ 2.72
LINC00543-201ENST00000567234 WASHC2CQ9Y4E1 1318 aa32.04■■■□□ 2.72
LINC00543-201ENST00000567234 CAMSAP1Q5T5Y3 1602 aa32.02■■■□□ 2.72
LINC00543-201ENST00000567234 MLECQ14165 292 aa32.02■■■□□ 2.72
LINC00543-201ENST00000567234 ZC3H13Q5T200 1668 aaKnown RBP32.01■■■□□ 2.72
LINC00543-201ENST00000567234 ANP32EQ9BTT0 268 aa32.01■■■□□ 2.72
LINC00543-201ENST00000567234 NPATQ14207 1427 aa32.01■■■□□ 2.71
LINC00543-201ENST00000567234 CFAP65Q6ZU64 1925 aaKnown RBP32.01■■■□□ 2.71
LINC00543-201ENST00000567234 IFT172Q9UG01 1749 aa31.99■■■□□ 2.71
LINC00543-201ENST00000567234 MYOM2P54296 1465 aa31.99■■■□□ 2.71
LINC00543-201ENST00000567234 UGGT1Q9NYU2 1555 aa31.98■■■□□ 2.71
LINC00543-201ENST00000567234 IQGAP1P46940 1657 aa31.97■■■□□ 2.71
LINC00543-201ENST00000567234 ADGRB3O60242 1522 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms