RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
CDH11-212ENST00000566827 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
CDH11-212ENST00000566827 A2MP01023 1474 aa16.66■□□□□ 0.26
CDH11-212ENST00000566827 ARHGEF5Q12774 1597 aa16.66■□□□□ 0.26
CDH11-212ENST00000566827 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
CDH11-212ENST00000566827 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
CDH11-212ENST00000566827 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
CDH11-212ENST00000566827 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
CDH11-212ENST00000566827 PTPRMP28827 1452 aa16.63■□□□□ 0.25
CDH11-212ENST00000566827 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
CDH11-212ENST00000566827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
CDH11-212ENST00000566827 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
CDH11-212ENST00000566827 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
CDH11-212ENST00000566827 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
CDH11-212ENST00000566827 CFAP65Q6ZU64 1925 aaKnown RBP16.61■□□□□ 0.25
CDH11-212ENST00000566827 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
CDH11-212ENST00000566827 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
CDH11-212ENST00000566827 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
CDH11-212ENST00000566827 HSPA2P54652 639 aa16.58■□□□□ 0.24
CDH11-212ENST00000566827 NCOA1Q15788 1441 aa16.58■□□□□ 0.24
CDH11-212ENST00000566827 RSPH4AQ5TD94 716 aa16.57■□□□□ 0.24
CDH11-212ENST00000566827 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
CDH11-212ENST00000566827 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
CDH11-212ENST00000566827 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
CDH11-212ENST00000566827 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
CDH11-212ENST00000566827 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
CDH11-212ENST00000566827 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
CDH11-212ENST00000566827 AGLP35573 1532 aa16.53■□□□□ 0.24
CDH11-212ENST00000566827 ESF1Q9H501 851 aaKnown RBP16.52■□□□□ 0.23
CDH11-212ENST00000566827 C3P01024 1663 aa16.52■□□□□ 0.23
CDH11-212ENST00000566827 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.23
CDH11-212ENST00000566827 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
CDH11-212ENST00000566827 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
CDH11-212ENST00000566827 SHANK2Q9UPX8 1470 aa16.51■□□□□ 0.23
CDH11-212ENST00000566827 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
CDH11-212ENST00000566827 CEP152O94986 1710 aa16.49■□□□□ 0.23
CDH11-212ENST00000566827 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
CDH11-212ENST00000566827 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
CDH11-212ENST00000566827 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
CDH11-212ENST00000566827 ADGRL2O95490 1459 aa16.46■□□□□ 0.22
CDH11-212ENST00000566827 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CDH11-212ENST00000566827 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
CDH11-212ENST00000566827 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
CDH11-212ENST00000566827 ABCC3O15438 1527 aa16.42■□□□□ 0.22
CDH11-212ENST00000566827 NAIPQ13075 1403 aa16.42■□□□□ 0.22
CDH11-212ENST00000566827 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
CDH11-212ENST00000566827 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
CDH11-212ENST00000566827 FOXD1Q16676 465 aa16.41■□□□□ 0.22
CDH11-212ENST00000566827 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CDH11-212ENST00000566827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDH11-212ENST00000566827 EIF2AK4Q9P2K8 1649 aaKnown RBP16.38■□□□□ 0.21
CDH11-212ENST00000566827 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
CDH11-212ENST00000566827 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
CDH11-212ENST00000566827 ROCK1Q13464 1354 aa16.37■□□□□ 0.21
CDH11-212ENST00000566827 NPATQ14207 1427 aa16.36■□□□□ 0.21
CDH11-212ENST00000566827 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
CDH11-212ENST00000566827 NUP155O75694 1391 aa16.36■□□□□ 0.21
CDH11-212ENST00000566827 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
CDH11-212ENST00000566827 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
CDH11-212ENST00000566827 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
CDH11-212ENST00000566827 SETD1BQ9UPS6 1966 aaKnown RBP16.34■□□□□ 0.21
CDH11-212ENST00000566827 C14orf37Q86TY3 774 aa16.34■□□□□ 0.21
CDH11-212ENST00000566827 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
CDH11-212ENST00000566827 MROH2AA6NES4 1674 aa16.33■□□□□ 0.21
CDH11-212ENST00000566827 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
CDH11-212ENST00000566827 PZPP20742 1482 aa16.31■□□□□ 0.2
CDH11-212ENST00000566827 PREX1Q8TCU6 1659 aa16.31■□□□□ 0.2
CDH11-212ENST00000566827 MYO3AQ8NEV4 1616 aa16.31■□□□□ 0.2
CDH11-212ENST00000566827 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
CDH11-212ENST00000566827 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
CDH11-212ENST00000566827 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
CDH11-212ENST00000566827 TNRQ92752 1358 aa16.29■□□□□ 0.2
CDH11-212ENST00000566827 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
CDH11-212ENST00000566827 E9PCH4 1651 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 UNC13BO14795 1591 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 ERVK-7P63135 1459 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 KANK1Q14678 1352 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
CDH11-212ENST00000566827 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
CDH11-212ENST00000566827 IDI1Q13907 227 aa16.27■□□□□ 0.2
CDH11-212ENST00000566827 EFCAB6Q5THR3 1501 aa16.27■□□□□ 0.19
CDH11-212ENST00000566827 SYNMO15061 1565 aa16.26■□□□□ 0.19
CDH11-212ENST00000566827 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
CDH11-212ENST00000566827 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
CDH11-212ENST00000566827 CEP170BQ9Y4F5 1589 aaPredicted RBP16.25■□□□□ 0.19
CDH11-212ENST00000566827 PKD2Q13563 968 aa16.24■□□□□ 0.19
CDH11-212ENST00000566827 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
CDH11-212ENST00000566827 IQGAP3Q86VI3 1631 aa16.23■□□□□ 0.19
CDH11-212ENST00000566827 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
CDH11-212ENST00000566827 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
CDH11-212ENST00000566827 TET3O43151 1660 aa16.21■□□□□ 0.19
CDH11-212ENST00000566827 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
CDH11-212ENST00000566827 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
CDH11-212ENST00000566827 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
CDH11-212ENST00000566827 LMTK2Q8IWU2 1503 aa16.2■□□□□ 0.18
CDH11-212ENST00000566827 LTKP29376 864 aa16.2■□□□□ 0.18
CDH11-212ENST00000566827 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
CDH11-212ENST00000566827 NOS1P29475 1434 aa16.18■□□□□ 0.18
CDH11-212ENST00000566827 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms