RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 GGT6Q6P531 493 aa15.28■□□□□ 0.04
PDXDC1-214ENST00000566633 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
PDXDC1-214ENST00000566633 GLI2P10070 1586 aa15.27■□□□□ 0.04
PDXDC1-214ENST00000566633 INO80Q9ULG1 1556 aaPredicted RBP15.27■□□□□ 0.04
PDXDC1-214ENST00000566633 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.03
PDXDC1-214ENST00000566633 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
PDXDC1-214ENST00000566633 KIDINS220Q9ULH0 1771 aa15.25■□□□□ 0.03
PDXDC1-214ENST00000566633 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
PDXDC1-214ENST00000566633 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
PDXDC1-214ENST00000566633 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
PDXDC1-214ENST00000566633 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
PDXDC1-214ENST00000566633 YEATS2Q9ULM3 1422 aa15.24■□□□□ 0.03
PDXDC1-214ENST00000566633 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
PDXDC1-214ENST00000566633 A2MP01023 1474 aa15.23■□□□□ 0.03
PDXDC1-214ENST00000566633 MLH3Q9UHC1 1453 aa15.23■□□□□ 0.03
PDXDC1-214ENST00000566633 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
PDXDC1-214ENST00000566633 UNC13BO14795 1591 aa15.22■□□□□ 0.03
PDXDC1-214ENST00000566633 KDM5CP41229 1560 aa15.22■□□□□ 0.03
PDXDC1-214ENST00000566633 PLA2R1Q13018 1463 aa15.21■□□□□ 0.02
PDXDC1-214ENST00000566633 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
PDXDC1-214ENST00000566633 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
PDXDC1-214ENST00000566633 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
PDXDC1-214ENST00000566633 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
PDXDC1-214ENST00000566633 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
PDXDC1-214ENST00000566633 TEX14Q8IWB6 1497 aa15.19■□□□□ 0.02
PDXDC1-214ENST00000566633 KANK1Q14678 1352 aa15.18■□□□□ 0.02
PDXDC1-214ENST00000566633 CCDC144AA2RUR9 1427 aa15.18■□□□□ 0.02
PDXDC1-214ENST00000566633 PPRC1Q5VV67 1664 aaKnown RBP15.17■□□□□ 0.02
PDXDC1-214ENST00000566633 FRMPD1Q5SYB0 1578 aa15.17■□□□□ 0.02
PDXDC1-214ENST00000566633 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
PDXDC1-214ENST00000566633 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
PDXDC1-214ENST00000566633 WASHC2CQ9Y4E1 1318 aa15.16■□□□□ 0.02
PDXDC1-214ENST00000566633 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
PDXDC1-214ENST00000566633 RICTORQ6R327 1708 aa15.15■□□□□ 0.02
PDXDC1-214ENST00000566633 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
PDXDC1-214ENST00000566633 MLECQ14165 292 aa15.14■□□□□ 0.01
PDXDC1-214ENST00000566633 ANP32CO43423 234 aa15.13■□□□□ 0.01
PDXDC1-214ENST00000566633 DIP2CQ9Y2E4 1556 aa15.13■□□□□ 0.01
PDXDC1-214ENST00000566633 MROH1Q8NDA8 1641 aa15.12■□□□□ 0.01
PDXDC1-214ENST00000566633 HSPA5P11021 654 aaKnown RBP15.12■□□□□ 0.01
PDXDC1-214ENST00000566633 DEPDC5O75140 1603 aa15.11■□□□□ 0.01
PDXDC1-214ENST00000566633 ATP10AO60312 1499 aa15.1■□□□□ 0.01
PDXDC1-214ENST00000566633 E9PCH4 1651 aa15.09■□□□□ 0.01
PDXDC1-214ENST00000566633 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
PDXDC1-214ENST00000566633 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDXDC1-214ENST00000566633 EIF2AK4Q9P2K8 1649 aaKnown RBP15.09■□□□□ 0.01
PDXDC1-214ENST00000566633 VWDEQ8N2E2 1590 aa15.08■□□□□ 0.01
PDXDC1-214ENST00000566633 CHGAP10645 457 aaKnown RBP15.08■□□□□ 0
PDXDC1-214ENST00000566633 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
PDXDC1-214ENST00000566633 UGGT1Q9NYU2 1555 aa15.06■□□□□ 0
PDXDC1-214ENST00000566633 NPATQ14207 1427 aa15.05■□□□□ 0
PDXDC1-214ENST00000566633 PTPRTO14522 1441 aa15.05■□□□□ -0
PDXDC1-214ENST00000566633 NBPF1Q3BBV0 1214 aa15.05■□□□□ -0
PDXDC1-214ENST00000566633 TET3O43151 1660 aa15.04■□□□□ -0
PDXDC1-214ENST00000566633 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
PDXDC1-214ENST00000566633 CARD11Q9BXL7 1154 aa15.04■□□□□ -0
PDXDC1-214ENST00000566633 ARID4BQ4LE39 1312 aaPredicted RBP15.04■□□□□ -0
PDXDC1-214ENST00000566633 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
PDXDC1-214ENST00000566633 CEP152O94986 1710 aa15.03■□□□□ -0
PDXDC1-214ENST00000566633 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
PDXDC1-214ENST00000566633 SUPT16HQ9Y5B9 1047 aaKnown RBP15.03■□□□□ -0
PDXDC1-214ENST00000566633 CFAP65Q6ZU64 1925 aaKnown RBP15.02■□□□□ -0
PDXDC1-214ENST00000566633 RNF17Q9BXT8 1623 aaKnown RBP15.02■□□□□ -0
PDXDC1-214ENST00000566633 EFCAB6Q5THR3 1501 aa15.02■□□□□ -0
PDXDC1-214ENST00000566633 ABCC3O15438 1527 aa15.02□□□□□ -0.01
PDXDC1-214ENST00000566633 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
PDXDC1-214ENST00000566633 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
PDXDC1-214ENST00000566633 TRPM2O94759 1503 aa15.01□□□□□ -0.01
PDXDC1-214ENST00000566633 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
PDXDC1-214ENST00000566633 CLTCL1P53675 1640 aa15□□□□□ -0.01
PDXDC1-214ENST00000566633 LMTK2Q8IWU2 1503 aa14.99□□□□□ -0.01
PDXDC1-214ENST00000566633 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
PDXDC1-214ENST00000566633 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
PDXDC1-214ENST00000566633 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
PDXDC1-214ENST00000566633 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
PDXDC1-214ENST00000566633 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
PDXDC1-214ENST00000566633 SIGLEC1Q9BZZ2 1709 aa14.98□□□□□ -0.01
PDXDC1-214ENST00000566633 USP47Q96K76 1375 aa14.98□□□□□ -0.01
PDXDC1-214ENST00000566633 CCDC7Q96M83 1385 aa14.97□□□□□ -0.01
PDXDC1-214ENST00000566633 IDI1Q13907 227 aa14.97□□□□□ -0.01
PDXDC1-214ENST00000566633 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
PDXDC1-214ENST00000566633 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
PDXDC1-214ENST00000566633 CNTLNQ9NXG0 1405 aa14.96□□□□□ -0.02
PDXDC1-214ENST00000566633 ADGRF5Q8IZF2 1346 aa14.95□□□□□ -0.02
PDXDC1-214ENST00000566633 BCORL1Q5H9F3 1711 aa14.94□□□□□ -0.02
PDXDC1-214ENST00000566633 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
PDXDC1-214ENST00000566633 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
PDXDC1-214ENST00000566633 CAMSAP1Q5T5Y3 1602 aa14.93□□□□□ -0.02
PDXDC1-214ENST00000566633 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
PDXDC1-214ENST00000566633 NOS1P29475 1434 aa14.92□□□□□ -0.02
PDXDC1-214ENST00000566633 ARHGEF40Q8TER5 1519 aa14.92□□□□□ -0.02
PDXDC1-214ENST00000566633 KIF7Q2M1P5 1343 aa14.91□□□□□ -0.02
PDXDC1-214ENST00000566633 AGLP35573 1532 aa14.9□□□□□ -0.02
PDXDC1-214ENST00000566633 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
PDXDC1-214ENST00000566633 CEBPAP49715 358 aaPredicted RBP14.89□□□□□ -0.03
PDXDC1-214ENST00000566633 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
PDXDC1-214ENST00000566633 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
PDXDC1-214ENST00000566633 PRKRIP1Q9H875 184 aaPredicted RBP14.88□□□□□ -0.03
PDXDC1-214ENST00000566633 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
PDXDC1-214ENST00000566633 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms