RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 USP47Q96K76 1375 aa12.15□□□□□ -0.46
LINC01541-201ENST00000566582 SPATA31E1Q6ZUB1 1445 aa12.15□□□□□ -0.46
LINC01541-201ENST00000566582 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
LINC01541-201ENST00000566582 ARAP3Q8WWN8 1544 aa12.15□□□□□ -0.46
LINC01541-201ENST00000566582 KIF7Q2M1P5 1343 aa12.14□□□□□ -0.47
LINC01541-201ENST00000566582 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
LINC01541-201ENST00000566582 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
LINC01541-201ENST00000566582 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
LINC01541-201ENST00000566582 ADGRL1O94910 1474 aa12.12□□□□□ -0.47
LINC01541-201ENST00000566582 RTEL1-TNFRSF6BF6WH68 1400 aa12.12□□□□□ -0.47
LINC01541-201ENST00000566582 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
LINC01541-201ENST00000566582 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
LINC01541-201ENST00000566582 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
LINC01541-201ENST00000566582 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
LINC01541-201ENST00000566582 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
LINC01541-201ENST00000566582 MAGI2Q86UL8 1455 aa12.09□□□□□ -0.47
LINC01541-201ENST00000566582 KDM5CP41229 1560 aa12.09□□□□□ -0.47
LINC01541-201ENST00000566582 POLR1AO95602 1720 aaPredicted RBP12.09□□□□□ -0.47
LINC01541-201ENST00000566582 ATP7AQ04656 1500 aa12.08□□□□□ -0.47
LINC01541-201ENST00000566582 KIF3BO15066 747 aa12.08□□□□□ -0.48
LINC01541-201ENST00000566582 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
LINC01541-201ENST00000566582 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
LINC01541-201ENST00000566582 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
LINC01541-201ENST00000566582 KANK1Q14678 1352 aa12.07□□□□□ -0.48
LINC01541-201ENST00000566582 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
LINC01541-201ENST00000566582 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
LINC01541-201ENST00000566582 PRAG1Q86YV5 1406 aa12.05□□□□□ -0.48
LINC01541-201ENST00000566582 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
LINC01541-201ENST00000566582 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
LINC01541-201ENST00000566582 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC01541-201ENST00000566582 A2MP01023 1474 aa12.04□□□□□ -0.48
LINC01541-201ENST00000566582 ATP10AO60312 1499 aa12.04□□□□□ -0.48
LINC01541-201ENST00000566582 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
LINC01541-201ENST00000566582 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
LINC01541-201ENST00000566582 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
LINC01541-201ENST00000566582 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
LINC01541-201ENST00000566582 CCDC184Q52MB2 194 aa12.02□□□□□ -0.49
LINC01541-201ENST00000566582 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
LINC01541-201ENST00000566582 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
LINC01541-201ENST00000566582 E9PCH4 1651 aa12.02□□□□□ -0.49
LINC01541-201ENST00000566582 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
LINC01541-201ENST00000566582 DEPDC5O75140 1603 aa12□□□□□ -0.49
LINC01541-201ENST00000566582 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
LINC01541-201ENST00000566582 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
LINC01541-201ENST00000566582 CYB5RLQ6IPT4 315 aa11.99□□□□□ -0.49
LINC01541-201ENST00000566582 TET3O43151 1660 aa11.99□□□□□ -0.49
LINC01541-201ENST00000566582 TRPM2O94759 1503 aa11.98□□□□□ -0.49
LINC01541-201ENST00000566582 SPHKAPQ2M3C7 1700 aa11.98□□□□□ -0.49
LINC01541-201ENST00000566582 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
LINC01541-201ENST00000566582 NEFLP07196 543 aa11.98□□□□□ -0.49
LINC01541-201ENST00000566582 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
LINC01541-201ENST00000566582 GGT6Q6P531 493 aa11.97□□□□□ -0.49
LINC01541-201ENST00000566582 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.49
LINC01541-201ENST00000566582 PTPRTO14522 1441 aa11.96□□□□□ -0.49
LINC01541-201ENST00000566582 PRDM15P57071 1507 aaPredicted RBP11.96□□□□□ -0.49
LINC01541-201ENST00000566582 FKBP8Q14318 412 aa11.96□□□□□ -0.5
LINC01541-201ENST00000566582 CLTCL1P53675 1640 aa11.95□□□□□ -0.5
LINC01541-201ENST00000566582 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
LINC01541-201ENST00000566582 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
LINC01541-201ENST00000566582 CEP152O94986 1710 aa11.94□□□□□ -0.5
LINC01541-201ENST00000566582 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
LINC01541-201ENST00000566582 TMF1P82094 1093 aa11.94□□□□□ -0.5
LINC01541-201ENST00000566582 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
LINC01541-201ENST00000566582 LAMC1P11047 1609 aa11.93□□□□□ -0.5
LINC01541-201ENST00000566582 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
LINC01541-201ENST00000566582 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
LINC01541-201ENST00000566582 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
LINC01541-201ENST00000566582 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
LINC01541-201ENST00000566582 BCANQ96GW7 911 aa11.92□□□□□ -0.5
LINC01541-201ENST00000566582 NEO1Q92859 1461 aa11.92□□□□□ -0.5
LINC01541-201ENST00000566582 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
LINC01541-201ENST00000566582 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
LINC01541-201ENST00000566582 TESK2Q96S53 571 aa11.91□□□□□ -0.5
LINC01541-201ENST00000566582 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
LINC01541-201ENST00000566582 MADDQ8WXG6 1647 aa11.91□□□□□ -0.5
LINC01541-201ENST00000566582 DISP3Q9P2K9 1392 aa11.91□□□□□ -0.5
LINC01541-201ENST00000566582 UGGT1Q9NYU2 1555 aa11.9□□□□□ -0.5
LINC01541-201ENST00000566582 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
LINC01541-201ENST00000566582 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
LINC01541-201ENST00000566582 RALBP1Q15311 655 aa11.89□□□□□ -0.51
LINC01541-201ENST00000566582 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
LINC01541-201ENST00000566582 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
LINC01541-201ENST00000566582 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
LINC01541-201ENST00000566582 KIF1BO60333 1816 aa11.88□□□□□ -0.51
LINC01541-201ENST00000566582 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
LINC01541-201ENST00000566582 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
LINC01541-201ENST00000566582 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
LINC01541-201ENST00000566582 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
LINC01541-201ENST00000566582 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
LINC01541-201ENST00000566582 PANK3Q9H999 370 aa11.87□□□□□ -0.51
LINC01541-201ENST00000566582 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
LINC01541-201ENST00000566582 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
LINC01541-201ENST00000566582 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
LINC01541-201ENST00000566582 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
LINC01541-201ENST00000566582 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
LINC01541-201ENST00000566582 EIF3AQ14152 1382 aaKnown RBP11.86□□□□□ -0.51
LINC01541-201ENST00000566582 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
LINC01541-201ENST00000566582 NPATQ14207 1427 aa11.85□□□□□ -0.51
LINC01541-201ENST00000566582 ADGRF5Q8IZF2 1346 aa11.85□□□□□ -0.51
LINC01541-201ENST00000566582 MAP3K4Q9Y6R4 1608 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms