RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 ZMYM3Q14202 1370 aa19.39■□□□□ 0.69
KLHDC4-216ENST00000566561 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
KLHDC4-216ENST00000566561 DHX29Q7Z478 1369 aaKnown RBP19.35■□□□□ 0.69
KLHDC4-216ENST00000566561 MIA2Q96PC5 1412 aa19.34■□□□□ 0.69
KLHDC4-216ENST00000566561 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
KLHDC4-216ENST00000566561 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
KLHDC4-216ENST00000566561 PKD2Q13563 968 aa19.33■□□□□ 0.68
KLHDC4-216ENST00000566561 PTPRKQ15262 1439 aa19.33■□□□□ 0.68
KLHDC4-216ENST00000566561 ARHGEF5Q12774 1597 aa19.32■□□□□ 0.68
KLHDC4-216ENST00000566561 ZNF335Q9H4Z2 1342 aaPredicted RBP19.32■□□□□ 0.68
KLHDC4-216ENST00000566561 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
KLHDC4-216ENST00000566561 KIF3BO15066 747 aa19.32■□□□□ 0.68
KLHDC4-216ENST00000566561 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
KLHDC4-216ENST00000566561 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
KLHDC4-216ENST00000566561 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
KLHDC4-216ENST00000566561 DNMT1P26358 1616 aaKnown RBP19.27■□□□□ 0.68
KLHDC4-216ENST00000566561 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
KLHDC4-216ENST00000566561 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
KLHDC4-216ENST00000566561 CPS1P31327 1500 aa19.22■□□□□ 0.67
KLHDC4-216ENST00000566561 MAST1Q9Y2H9 1570 aa19.22■□□□□ 0.67
KLHDC4-216ENST00000566561 KDM5DQ9BY66 1539 aa19.21■□□□□ 0.67
KLHDC4-216ENST00000566561 FGD6Q6ZV73 1430 aa19.21■□□□□ 0.67
KLHDC4-216ENST00000566561 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
KLHDC4-216ENST00000566561 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
KLHDC4-216ENST00000566561 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
KLHDC4-216ENST00000566561 ABCC5O15440 1437 aa19.18■□□□□ 0.66
KLHDC4-216ENST00000566561 PZPP20742 1482 aa19.17■□□□□ 0.66
KLHDC4-216ENST00000566561 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
KLHDC4-216ENST00000566561 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
KLHDC4-216ENST00000566561 TNRQ92752 1358 aa19.17■□□□□ 0.66
KLHDC4-216ENST00000566561 DAPK1P53355 1430 aa19.17■□□□□ 0.66
KLHDC4-216ENST00000566561 FBXO31Q5XUX0 539 aaPredicted RBP19.16■□□□□ 0.66
KLHDC4-216ENST00000566561 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
KLHDC4-216ENST00000566561 CHIC2Q9UKJ5 165 aa19.15■□□□□ 0.66
KLHDC4-216ENST00000566561 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
KLHDC4-216ENST00000566561 SHANK2Q9UPX8 1470 aa19.15■□□□□ 0.66
KLHDC4-216ENST00000566561 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
KLHDC4-216ENST00000566561 DEPDC5O75140 1603 aa19.13■□□□□ 0.65
KLHDC4-216ENST00000566561 TOM1O60784 492 aa19.12■□□□□ 0.65
KLHDC4-216ENST00000566561 NLRP1Q9C000 1473 aa19.11■□□□□ 0.65
KLHDC4-216ENST00000566561 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
KLHDC4-216ENST00000566561 VWDEQ8N2E2 1590 aa19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 UGGT1Q9NYU2 1555 aa19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 PIP4K2BP78356 416 aa19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 ZC3H13Q5T200 1668 aaKnown RBP19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
KLHDC4-216ENST00000566561 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
KLHDC4-216ENST00000566561 HSPA1LP34931 641 aa19.09■□□□□ 0.65
KLHDC4-216ENST00000566561 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
KLHDC4-216ENST00000566561 ERBINQ96RT1 1412 aa19.08■□□□□ 0.65
KLHDC4-216ENST00000566561 SYNMO15061 1565 aa19.08■□□□□ 0.65
KLHDC4-216ENST00000566561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.645e-7■■■■□ 20.5
KLHDC4-216ENST00000566561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 ABCC3O15438 1527 aa19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 MED14O60244 1454 aa19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 ANKLE2Q86XL3 938 aa19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 NPHP4O75161 1426 aaPredicted RBP19.06■□□□□ 0.64
KLHDC4-216ENST00000566561 THEMISQ8N1K5 641 aaPredicted RBP19.04■□□□□ 0.64
KLHDC4-216ENST00000566561 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
KLHDC4-216ENST00000566561 KANK1Q14678 1352 aa19.03■□□□□ 0.64
KLHDC4-216ENST00000566561 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.64
KLHDC4-216ENST00000566561 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
KLHDC4-216ENST00000566561 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
KLHDC4-216ENST00000566561 CFAP65Q6ZU64 1925 aaKnown RBP19■□□□□ 0.63
KLHDC4-216ENST00000566561 CEP152O94986 1710 aa19■□□□□ 0.63
KLHDC4-216ENST00000566561 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
KLHDC4-216ENST00000566561 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
KLHDC4-216ENST00000566561 ERVK-7P63135 1459 aa18.98■□□□□ 0.63
KLHDC4-216ENST00000566561 UBR1Q8IWV7 1749 aa18.97■□□□□ 0.63
KLHDC4-216ENST00000566561 ITGAEP38570 1179 aa18.96■□□□□ 0.63
KLHDC4-216ENST00000566561 LRRC7Q96NW7 1537 aa18.95■□□□□ 0.62
KLHDC4-216ENST00000566561 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
KLHDC4-216ENST00000566561 ANKRD50Q9ULJ7 1429 aa18.94■□□□□ 0.62
KLHDC4-216ENST00000566561 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
KLHDC4-216ENST00000566561 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
KLHDC4-216ENST00000566561 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
KLHDC4-216ENST00000566561 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
KLHDC4-216ENST00000566561 ROCK1Q13464 1354 aa18.88■□□□□ 0.61
KLHDC4-216ENST00000566561 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
KLHDC4-216ENST00000566561 SLIT1O75093 1534 aa18.86■□□□□ 0.61
KLHDC4-216ENST00000566561 ARHGAP23Q9P227 1491 aa18.84■□□□□ 0.61
KLHDC4-216ENST00000566561 IDI1Q13907 227 aa18.83■□□□□ 0.6
KLHDC4-216ENST00000566561 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.6
KLHDC4-216ENST00000566561 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
KLHDC4-216ENST00000566561 EFCAB6Q5THR3 1501 aa18.83■□□□□ 0.6
KLHDC4-216ENST00000566561 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
KLHDC4-216ENST00000566561 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
KLHDC4-216ENST00000566561 NOS1P29475 1434 aa18.8■□□□□ 0.6
KLHDC4-216ENST00000566561 LTKP29376 864 aa18.79■□□□□ 0.6
KLHDC4-216ENST00000566561 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
KLHDC4-216ENST00000566561 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
KLHDC4-216ENST00000566561 RPRD2Q5VT52 1461 aaKnown RBP18.78■□□□□ 0.6
KLHDC4-216ENST00000566561 NUP155O75694 1391 aa18.77■□□□□ 0.6
KLHDC4-216ENST00000566561 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
KLHDC4-216ENST00000566561 UNC13BO14795 1591 aa18.76■□□□□ 0.59
KLHDC4-216ENST00000566561 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
KLHDC4-216ENST00000566561 TET3O43151 1660 aa18.74■□□□□ 0.59
KLHDC4-216ENST00000566561 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms