RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 KIF15Q9NS87 1388 aa24.89■■□□□ 1.57
SCAMP2-208ENST00000566557 DHX29Q7Z478 1369 aaKnown RBP24.88■■□□□ 1.57
SCAMP2-208ENST00000566557 RRP7BPQ9NSQ0 103 aa24.87■■□□□ 1.57
SCAMP2-208ENST00000566557 DUOX2Q9NRD8 1548 aa24.86■■□□□ 1.57
SCAMP2-208ENST00000566557 STRCQ7RTU9 1775 aa24.86■■□□□ 1.57
SCAMP2-208ENST00000566557 ADGRL2O95490 1459 aa24.86■■□□□ 1.57
SCAMP2-208ENST00000566557 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
SCAMP2-208ENST00000566557 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
SCAMP2-208ENST00000566557 ESF1Q9H501 851 aaKnown RBP24.84■■□□□ 1.57
SCAMP2-208ENST00000566557 PTPRTO14522 1441 aa24.84■■□□□ 1.57
SCAMP2-208ENST00000566557 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.56
SCAMP2-208ENST00000566557 NCOA1Q15788 1441 aa24.81■■□□□ 1.56
SCAMP2-208ENST00000566557 KIF3BO15066 747 aa24.8■■□□□ 1.56
SCAMP2-208ENST00000566557 GGT6Q6P531 493 aa24.79■■□□□ 1.56
SCAMP2-208ENST00000566557 SETD1BQ9UPS6 1966 aaKnown RBP24.79■■□□□ 1.56
SCAMP2-208ENST00000566557 ERBINQ96RT1 1412 aa24.78■■□□□ 1.56
SCAMP2-208ENST00000566557 ROCK1Q13464 1354 aa24.76■■□□□ 1.55
SCAMP2-208ENST00000566557 RNF17Q9BXT8 1623 aaKnown RBP24.75■■□□□ 1.55
SCAMP2-208ENST00000566557 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
SCAMP2-208ENST00000566557 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
SCAMP2-208ENST00000566557 ANKRD50Q9ULJ7 1429 aa24.7■■□□□ 1.55
SCAMP2-208ENST00000566557 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
SCAMP2-208ENST00000566557 KDM5DQ9BY66 1539 aa24.69■■□□□ 1.54
SCAMP2-208ENST00000566557 CNTLNQ9NXG0 1405 aa24.69■■□□□ 1.54
SCAMP2-208ENST00000566557 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
SCAMP2-208ENST00000566557 UBAP1LF5GYI3 381 aa24.68■■□□□ 1.54
SCAMP2-208ENST00000566557 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
SCAMP2-208ENST00000566557 IQSEC2Q5JU85 1478 aa24.67■■□□□ 1.54
SCAMP2-208ENST00000566557 DEPDC5O75140 1603 aa24.67■■□□□ 1.54
SCAMP2-208ENST00000566557 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
SCAMP2-208ENST00000566557 C3P01024 1663 aa24.66■■□□□ 1.54
SCAMP2-208ENST00000566557 CEP152O94986 1710 aa24.66■■□□□ 1.54
SCAMP2-208ENST00000566557 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
SCAMP2-208ENST00000566557 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
SCAMP2-208ENST00000566557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.64■■□□□ 1.54
SCAMP2-208ENST00000566557 NCKAP5LQ9HCH0 1330 aa24.63■■□□□ 1.53
SCAMP2-208ENST00000566557 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
SCAMP2-208ENST00000566557 ABCC3O15438 1527 aa24.61■■□□□ 1.53
SCAMP2-208ENST00000566557 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
SCAMP2-208ENST00000566557 KANK1Q14678 1352 aa24.61■■□□□ 1.53
SCAMP2-208ENST00000566557 NAIPQ13075 1403 aa24.61■■□□□ 1.53
SCAMP2-208ENST00000566557 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
SCAMP2-208ENST00000566557 UNC13BO14795 1591 aa24.6■■□□□ 1.53
SCAMP2-208ENST00000566557 HFM1A2PYH4 1435 aa24.6■■□□□ 1.53
SCAMP2-208ENST00000566557 CAMSAP1Q5T5Y3 1602 aa24.58■■□□□ 1.53
SCAMP2-208ENST00000566557 ZMYM3Q14202 1370 aa24.56■■□□□ 1.52
SCAMP2-208ENST00000566557 VWDEQ8N2E2 1590 aa24.53■■□□□ 1.52
SCAMP2-208ENST00000566557 PKD2Q13563 968 aa24.52■■□□□ 1.52
SCAMP2-208ENST00000566557 NPATQ14207 1427 aa24.51■■□□□ 1.51
SCAMP2-208ENST00000566557 PZPP20742 1482 aa24.5■■□□□ 1.51
SCAMP2-208ENST00000566557 IQGAP3Q86VI3 1631 aa24.5■■□□□ 1.51
SCAMP2-208ENST00000566557 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
SCAMP2-208ENST00000566557 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
SCAMP2-208ENST00000566557 TET3O43151 1660 aa24.47■■□□□ 1.51
SCAMP2-208ENST00000566557 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
SCAMP2-208ENST00000566557 NUP155O75694 1391 aa24.47■■□□□ 1.51
SCAMP2-208ENST00000566557 HSPA1LP34931 641 aa24.45■■□□□ 1.5
SCAMP2-208ENST00000566557 PIP4K2BP78356 416 aa24.45■■□□□ 1.5
SCAMP2-208ENST00000566557 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
SCAMP2-208ENST00000566557 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
SCAMP2-208ENST00000566557 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
SCAMP2-208ENST00000566557 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
SCAMP2-208ENST00000566557 ERVK-7P63135 1459 aa24.41■■□□□ 1.5
SCAMP2-208ENST00000566557 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
SCAMP2-208ENST00000566557 ARHGAP31Q2M1Z3 1444 aa24.4■■□□□ 1.5
SCAMP2-208ENST00000566557 TNRQ92752 1358 aa24.4■■□□□ 1.5
SCAMP2-208ENST00000566557 PLA2R1Q13018 1463 aa24.38■■□□□ 1.49
SCAMP2-208ENST00000566557 E9PCH4 1651 aa24.38■■□□□ 1.49
SCAMP2-208ENST00000566557 TOM1O60784 492 aa24.38■■□□□ 1.49
SCAMP2-208ENST00000566557 RAB3GAP2Q9H2M9 1393 aa24.38■■□□□ 1.49
SCAMP2-208ENST00000566557 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
SCAMP2-208ENST00000566557 ZNF142P52746 1687 aaPredicted RBP24.34■■□□□ 1.49
SCAMP2-208ENST00000566557 RPRD2Q5VT52 1461 aaKnown RBP24.34■■□□□ 1.49
SCAMP2-208ENST00000566557 CEP170BQ9Y4F5 1589 aaPredicted RBP24.33■■□□□ 1.49
SCAMP2-208ENST00000566557 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
SCAMP2-208ENST00000566557 SYNMO15061 1565 aa24.29■■□□□ 1.48
SCAMP2-208ENST00000566557 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
SCAMP2-208ENST00000566557 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
SCAMP2-208ENST00000566557 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
SCAMP2-208ENST00000566557 A2ML1A8K2U0 1454 aa24.28■■□□□ 1.48
SCAMP2-208ENST00000566557 SPHKAPQ2M3C7 1700 aa24.27■■□□□ 1.48
SCAMP2-208ENST00000566557 NOS1P29475 1434 aa24.26■■□□□ 1.47
SCAMP2-208ENST00000566557 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
SCAMP2-208ENST00000566557 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
SCAMP2-208ENST00000566557 UGGT1Q9NYU2 1555 aa24.23■■□□□ 1.47
SCAMP2-208ENST00000566557 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
SCAMP2-208ENST00000566557 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
SCAMP2-208ENST00000566557 UBR1Q8IWV7 1749 aa24.2■■□□□ 1.46
SCAMP2-208ENST00000566557 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
SCAMP2-208ENST00000566557 CPS1P31327 1500 aa24.19■■□□□ 1.46
SCAMP2-208ENST00000566557 ADGRB3O60242 1522 aa24.17■■□□□ 1.46
SCAMP2-208ENST00000566557 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
SCAMP2-208ENST00000566557 TRPM2O94759 1503 aa24.16■■□□□ 1.46
SCAMP2-208ENST00000566557 FOXD1Q16676 465 aa24.16■■□□□ 1.46
SCAMP2-208ENST00000566557 HRCP23327 699 aa24.14■■□□□ 1.45
SCAMP2-208ENST00000566557 IDI1Q13907 227 aa24.14■■□□□ 1.45
SCAMP2-208ENST00000566557 THEMISQ8N1K5 641 aaPredicted RBP24.14■■□□□ 1.45
SCAMP2-208ENST00000566557 SLC52A1Q9NWF4 448 aa24.14■■□□□ 1.45
SCAMP2-208ENST00000566557 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
SCAMP2-208ENST00000566557 CHGAP10645 457 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms