RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 KDM5DQ9BY66 1539 aa35.21■■■■□ 3.23
GGA2-206ENST00000566547 LTBP4Q8N2S1 1624 aa35.21■■■■□ 3.23
GGA2-206ENST00000566547 MYOM3Q5VTT5 1437 aa35.2■■■■□ 3.23
GGA2-206ENST00000566547 WASHC2CQ9Y4E1 1318 aa35.17■■■■□ 3.22
GGA2-206ENST00000566547 MAST1Q9Y2H9 1570 aa35.16■■■■□ 3.22
GGA2-206ENST00000566547 PLA2R1Q13018 1463 aa35.15■■■■□ 3.22
GGA2-206ENST00000566547 A2ML1A8K2U0 1454 aa35.14■■■■□ 3.22
GGA2-206ENST00000566547 MIA2Q96PC5 1412 aa35.14■■■■□ 3.22
GGA2-206ENST00000566547 DNMT1P26358 1616 aaKnown RBP35.14■■■■□ 3.22
GGA2-206ENST00000566547 PZPP20742 1482 aa35.13■■■■□ 3.21
GGA2-206ENST00000566547 TNRQ92752 1358 aa35.13■■■■□ 3.21
GGA2-206ENST00000566547 TCOF1Q13428 1488 aaKnown RBP35.12■■■■□ 3.21
GGA2-206ENST00000566547 FAM135AQ9P2D6 1515 aa35.1■■■■□ 3.21
GGA2-206ENST00000566547 PKD2Q13563 968 aa35.09■■■■□ 3.21
GGA2-206ENST00000566547 ZNF335Q9H4Z2 1342 aaPredicted RBP35.08■■■■□ 3.21
GGA2-206ENST00000566547 RNF17Q9BXT8 1623 aaKnown RBP35.07■■■■□ 3.21
GGA2-206ENST00000566547 APLP2Q06481 763 aa35.05■■■■□ 3.2
GGA2-206ENST00000566547 ABCC3O15438 1527 aa35.01■■■■□ 3.2
GGA2-206ENST00000566547 PTPN23Q9H3S7 1636 aa35.01■■■■□ 3.19
GGA2-206ENST00000566547 EIF2AK4Q9P2K8 1649 aaKnown RBP35.01■■■■□ 3.19
GGA2-206ENST00000566547 MROH1Q8NDA8 1641 aa34.99■■■■□ 3.19
GGA2-206ENST00000566547 CROCC2H7BZ55 1655 aa34.98■■■■□ 3.19
GGA2-206ENST00000566547 POLR1AO95602 1720 aaPredicted RBP34.98■■■■□ 3.19
GGA2-206ENST00000566547 ZC3H13Q5T200 1668 aaKnown RBP34.96■■■■□ 3.19
GGA2-206ENST00000566547 CEP152O94986 1710 aa34.96■■■■□ 3.19
GGA2-206ENST00000566547 ABCC5O15440 1437 aa34.96■■■■□ 3.19
GGA2-206ENST00000566547 IQSEC2Q5JU85 1478 aa34.96■■■■□ 3.19
GGA2-206ENST00000566547 DUOX2Q9NRD8 1548 aa34.95■■■■□ 3.19
GGA2-206ENST00000566547 NEURL4Q96JN8 1562 aa34.95■■■■□ 3.18
GGA2-206ENST00000566547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.94■■■■□ 3.18
GGA2-206ENST00000566547 CFAP65Q6ZU64 1925 aaKnown RBP34.93■■■■□ 3.18
GGA2-206ENST00000566547 KIF15Q9NS87 1388 aa34.92■■■■□ 3.18
GGA2-206ENST00000566547 NLRP1Q9C000 1473 aa34.91■■■■□ 3.18
GGA2-206ENST00000566547 RRP7BPQ9NSQ0 103 aa34.91■■■■□ 3.18
GGA2-206ENST00000566547 UGGT1Q9NYU2 1555 aa34.91■■■■□ 3.18
GGA2-206ENST00000566547 FGD6Q6ZV73 1430 aa34.9■■■■□ 3.18
GGA2-206ENST00000566547 SHANK2Q9UPX8 1470 aa34.9■■■■□ 3.18
GGA2-206ENST00000566547 DAPK1P53355 1430 aa34.89■■■■□ 3.18
GGA2-206ENST00000566547 SPATA31D1Q6ZQQ2 1576 aa34.87■■■■□ 3.17
GGA2-206ENST00000566547 ERVK-7P63135 1459 aa34.86■■■■□ 3.17
GGA2-206ENST00000566547 THEMISQ8N1K5 641 aaPredicted RBP34.86■■■■□ 3.17
GGA2-206ENST00000566547 ANKLE2Q86XL3 938 aa34.84■■■■□ 3.17
GGA2-206ENST00000566547 CHIC2Q9UKJ5 165 aa34.83■■■■□ 3.17
GGA2-206ENST00000566547 UBAP1LF5GYI3 381 aa34.82■■■■□ 3.16
GGA2-206ENST00000566547 ERBINQ96RT1 1412 aa34.81■■■■□ 3.16
GGA2-206ENST00000566547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.8■■■■□ 3.162e-11■□□□□ 9.7
GGA2-206ENST00000566547 PRDM15P57071 1507 aaPredicted RBP34.8■■■■□ 3.16
GGA2-206ENST00000566547 NPHP4O75161 1426 aaPredicted RBP34.76■■■■□ 3.16
GGA2-206ENST00000566547 DEPDC5O75140 1603 aa34.75■■■■□ 3.15
GGA2-206ENST00000566547 MED14O60244 1454 aa34.72■■■■□ 3.15
GGA2-206ENST00000566547 VWDEQ8N2E2 1590 aa34.72■■■■□ 3.15
GGA2-206ENST00000566547 DISP3Q9P2K9 1392 aa34.72■■■■□ 3.15
GGA2-206ENST00000566547 UBR1Q8IWV7 1749 aa34.72■■■■□ 3.15
GGA2-206ENST00000566547 IQGAP1P46940 1657 aa34.71■■■■□ 3.15
GGA2-206ENST00000566547 ANKRD30AQ9BXX3 1397 aa34.7■■■■□ 3.15
GGA2-206ENST00000566547 CPS1P31327 1500 aa34.68■■■■□ 3.14
GGA2-206ENST00000566547 ARHGAP31Q2M1Z3 1444 aa34.68■■■■□ 3.14
GGA2-206ENST00000566547 FAM50AQ14320 339 aaKnown RBP34.67■■■■□ 3.14
GGA2-206ENST00000566547 KANK1Q14678 1352 aa34.64■■■■□ 3.14
GGA2-206ENST00000566547 STRCP1A6NGW2 1772 aa34.61■■■■□ 3.13
GGA2-206ENST00000566547 PIK3C2BO00750 1634 aa34.59■■■■□ 3.13
GGA2-206ENST00000566547 SCAF1Q9H7N4 1312 aaKnown RBP34.59■■■■□ 3.13
GGA2-206ENST00000566547 ADGRL2O95490 1459 aa34.58■■■■□ 3.13
GGA2-206ENST00000566547 PIP4K2BP78356 416 aa34.58■■■■□ 3.13
GGA2-206ENST00000566547 LTKP29376 864 aa34.57■■■■□ 3.12
GGA2-206ENST00000566547 ILDR2Q71H61 639 aa34.57■■■■□ 3.12
GGA2-206ENST00000566547 LMTK2Q8IWU2 1503 aa34.56■■■■□ 3.12
GGA2-206ENST00000566547 SCAF11Q99590 1463 aaKnown RBP34.55■■■■□ 3.12
GGA2-206ENST00000566547 ARHGAP23Q9P227 1491 aa34.54■■■■□ 3.12
GGA2-206ENST00000566547 SLIT1O75093 1534 aa34.53■■■■□ 3.12
GGA2-206ENST00000566547 TXNDC2Q86VQ3 553 aa34.52■■■■□ 3.12
GGA2-206ENST00000566547 SYNMO15061 1565 aa34.5■■■■□ 3.11
GGA2-206ENST00000566547 TOM1O60784 492 aa34.5■■■■□ 3.11
GGA2-206ENST00000566547 EFCAB6Q5THR3 1501 aa34.5■■■■□ 3.11
GGA2-206ENST00000566547 IDI1Q13907 227 aa34.48■■■■□ 3.11
GGA2-206ENST00000566547 STAG3Q9UJ98 1225 aa34.48■■■■□ 3.11
GGA2-206ENST00000566547 ANKRD50Q9ULJ7 1429 aa34.47■■■■□ 3.11
GGA2-206ENST00000566547 LRRC7Q96NW7 1537 aa34.47■■■■□ 3.11
GGA2-206ENST00000566547 ALKQ9UM73 1620 aa34.46■■■■□ 3.11
GGA2-206ENST00000566547 HSPA1LP34931 641 aa34.45■■■■□ 3.11
GGA2-206ENST00000566547 EID1Q9Y6B2 187 aa34.44■■■■□ 3.1
GGA2-206ENST00000566547 TMEM2Q9UHN6 1383 aa34.44■■■■□ 3.1
GGA2-206ENST00000566547 PPARGC1BQ86YN6 1023 aaKnown RBP34.43■■■■□ 3.1
GGA2-206ENST00000566547 NOS1P29475 1434 aa34.42■■■■□ 3.1
GGA2-206ENST00000566547 KDM5AP29375 1690 aaKnown RBP34.39■■■■□ 3.1
GGA2-206ENST00000566547 ADGRB3O60242 1522 aa34.35■■■■□ 3.09
GGA2-206ENST00000566547 SENP3Q9H4L4 574 aaPredicted RBP34.34■■■■□ 3.09
GGA2-206ENST00000566547 TET3O43151 1660 aa34.33■■■■□ 3.09
GGA2-206ENST00000566547 XIRP1Q702N8 1843 aaKnown RBP34.32■■■■□ 3.08
GGA2-206ENST00000566547 ITGAEP38570 1179 aa34.31■■■■□ 3.08
GGA2-206ENST00000566547 UNC13BO14795 1591 aa34.31■■■■□ 3.08
GGA2-206ENST00000566547 MYO5BQ9ULV0 1848 aa34.3■■■■□ 3.08
GGA2-206ENST00000566547 RPRD2Q5VT52 1461 aaKnown RBP34.28■■■■□ 3.08
GGA2-206ENST00000566547 SLC26A8Q96RN1 970 aa34.28■■■■□ 3.08
GGA2-206ENST00000566547 SLC52A1Q9NWF4 448 aa34.28■■■■□ 3.08
GGA2-206ENST00000566547 GCC2Q8IWJ2 1684 aa34.28■■■■□ 3.08
GGA2-206ENST00000566547 ROCK1Q13464 1354 aa34.24■■■■□ 3.07
GGA2-206ENST00000566547 SOCS7O14512 581 aa34.23■■■■□ 3.07
GGA2-206ENST00000566547 E9PCH4 1651 aa34.22■■■■□ 3.07
GGA2-206ENST00000566547 MED1Q15648 1581 aaPredicted RBP34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms