RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 NEO1Q92859 1461 aa16.24■□□□□ 0.19
LINC00562-201ENST00000566385 KDM5CP41229 1560 aa16.24■□□□□ 0.19
LINC00562-201ENST00000566385 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
LINC00562-201ENST00000566385 KIF3BO15066 747 aa16.24■□□□□ 0.19
LINC00562-201ENST00000566385 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
LINC00562-201ENST00000566385 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
LINC00562-201ENST00000566385 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
LINC00562-201ENST00000566385 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
LINC00562-201ENST00000566385 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
LINC00562-201ENST00000566385 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
LINC00562-201ENST00000566385 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
LINC00562-201ENST00000566385 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
LINC00562-201ENST00000566385 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
LINC00562-201ENST00000566385 A2MP01023 1474 aa16.17■□□□□ 0.18
LINC00562-201ENST00000566385 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
LINC00562-201ENST00000566385 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
LINC00562-201ENST00000566385 E9PCH4 1651 aa16.16■□□□□ 0.18
LINC00562-201ENST00000566385 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
LINC00562-201ENST00000566385 MIER1Q8N108 512 aa16.16■□□□□ 0.18
LINC00562-201ENST00000566385 EIF2AK4Q9P2K8 1649 aaKnown RBP16.15■□□□□ 0.18
LINC00562-201ENST00000566385 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
LINC00562-201ENST00000566385 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
LINC00562-201ENST00000566385 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
LINC00562-201ENST00000566385 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
LINC00562-201ENST00000566385 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
LINC00562-201ENST00000566385 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
LINC00562-201ENST00000566385 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
LINC00562-201ENST00000566385 GGT6Q6P531 493 aa16.12■□□□□ 0.17
LINC00562-201ENST00000566385 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
LINC00562-201ENST00000566385 DIP2CQ9Y2E4 1556 aa16.11■□□□□ 0.17
LINC00562-201ENST00000566385 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
LINC00562-201ENST00000566385 KANK1Q14678 1352 aa16.1■□□□□ 0.17
LINC00562-201ENST00000566385 ATP10AO60312 1499 aa16.1■□□□□ 0.17
LINC00562-201ENST00000566385 TET3O43151 1660 aa16.1■□□□□ 0.17
LINC00562-201ENST00000566385 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
LINC00562-201ENST00000566385 CEP152O94986 1710 aa16.08■□□□□ 0.17
LINC00562-201ENST00000566385 COL17A1Q9UMD9 1497 aaPredicted RBP16.08■□□□□ 0.16
LINC00562-201ENST00000566385 RNF17Q9BXT8 1623 aaKnown RBP16.07■□□□□ 0.16
LINC00562-201ENST00000566385 EIF4G2P78344 907 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00562-201ENST00000566385 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
LINC00562-201ENST00000566385 PTPRTO14522 1441 aa16.05■□□□□ 0.16
LINC00562-201ENST00000566385 CFAP65Q6ZU64 1925 aaKnown RBP16.05■□□□□ 0.16
LINC00562-201ENST00000566385 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
LINC00562-201ENST00000566385 TRPM2O94759 1503 aa16.04■□□□□ 0.16
LINC00562-201ENST00000566385 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
LINC00562-201ENST00000566385 UGGT1Q9NYU2 1555 aa16.04■□□□□ 0.16
LINC00562-201ENST00000566385 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
LINC00562-201ENST00000566385 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
LINC00562-201ENST00000566385 BCORL1Q5H9F3 1711 aa16.03■□□□□ 0.16
LINC00562-201ENST00000566385 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
LINC00562-201ENST00000566385 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
LINC00562-201ENST00000566385 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
LINC00562-201ENST00000566385 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
LINC00562-201ENST00000566385 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
LINC00562-201ENST00000566385 NPATQ14207 1427 aa16■□□□□ 0.15
LINC00562-201ENST00000566385 ABCC3O15438 1527 aa15.99■□□□□ 0.15
LINC00562-201ENST00000566385 PRAG1Q86YV5 1406 aa15.99■□□□□ 0.15
LINC00562-201ENST00000566385 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
LINC00562-201ENST00000566385 RALGAPBQ86X10 1494 aa15.99■□□□□ 0.15
LINC00562-201ENST00000566385 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
LINC00562-201ENST00000566385 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
LINC00562-201ENST00000566385 USP47Q96K76 1375 aa15.97■□□□□ 0.15
LINC00562-201ENST00000566385 TRPM1Q7Z4N2 1603 aa15.96■□□□□ 0.15
LINC00562-201ENST00000566385 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
LINC00562-201ENST00000566385 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
LINC00562-201ENST00000566385 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
LINC00562-201ENST00000566385 MROH2AA6NES4 1674 aa15.92■□□□□ 0.14
LINC00562-201ENST00000566385 MLECQ14165 292 aa15.91■□□□□ 0.14
LINC00562-201ENST00000566385 ST20-MTHFSA0A0A6YYL1 179 aa15.91■□□□□ 0.14
LINC00562-201ENST00000566385 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
LINC00562-201ENST00000566385 KIF1BO60333 1816 aa15.91■□□□□ 0.14
LINC00562-201ENST00000566385 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
LINC00562-201ENST00000566385 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
LINC00562-201ENST00000566385 CHGAP10645 457 aaKnown RBP15.9■□□□□ 0.14
LINC00562-201ENST00000566385 REREQ9P2R6 1566 aa15.89■□□□□ 0.13
LINC00562-201ENST00000566385 MADDQ8WXG6 1647 aa15.88■□□□□ 0.13
LINC00562-201ENST00000566385 NOS1P29475 1434 aa15.88■□□□□ 0.13
LINC00562-201ENST00000566385 ZC3H13Q5T200 1668 aaKnown RBP15.88■□□□□ 0.13
LINC00562-201ENST00000566385 SYNMO15061 1565 aa15.88■□□□□ 0.13
LINC00562-201ENST00000566385 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
LINC00562-201ENST00000566385 CNTLNQ9NXG0 1405 aa15.88■□□□□ 0.13
LINC00562-201ENST00000566385 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
LINC00562-201ENST00000566385 AGLP35573 1532 aa15.87■□□□□ 0.13
LINC00562-201ENST00000566385 ARHGAP31Q2M1Z3 1444 aa15.87■□□□□ 0.13
LINC00562-201ENST00000566385 GPRASP1Q5JY77 1395 aa15.86■□□□□ 0.13
LINC00562-201ENST00000566385 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
LINC00562-201ENST00000566385 POLR1AO95602 1720 aaPredicted RBP15.86■□□□□ 0.13
LINC00562-201ENST00000566385 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
LINC00562-201ENST00000566385 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
LINC00562-201ENST00000566385 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
LINC00562-201ENST00000566385 IDI1Q13907 227 aa15.85■□□□□ 0.13
LINC00562-201ENST00000566385 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
LINC00562-201ENST00000566385 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
LINC00562-201ENST00000566385 PIK3C2BO00750 1634 aa15.83■□□□□ 0.13
LINC00562-201ENST00000566385 CLTCQ00610 1675 aaKnown RBP15.83■□□□□ 0.12
LINC00562-201ENST00000566385 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.12
LINC00562-201ENST00000566385 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
LINC00562-201ENST00000566385 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
LINC00562-201ENST00000566385 ANP32CO43423 234 aa15.81■□□□□ 0.12
LINC00562-201ENST00000566385 LAMC1P11047 1609 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms