RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TCOF1Q13428 1488 aaKnown RBP26.27■■□□□ 1.8
TSR3-202ENST00000566296 LRRC9Q6ZRR7 1453 aa26.25■■□□□ 1.79
TSR3-202ENST00000566296 PZPP20742 1482 aa26.23■■□□□ 1.79
TSR3-202ENST00000566296 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
TSR3-202ENST00000566296 TNRQ92752 1358 aa26.21■■□□□ 1.79
TSR3-202ENST00000566296 TSPY4P0CV99 314 aa26.21■■□□□ 1.79
TSR3-202ENST00000566296 TSPY10P0CW01 314 aa26.21■■□□□ 1.79
TSR3-202ENST00000566296 ZNF335Q9H4Z2 1342 aaPredicted RBP26.19■■□□□ 1.78
TSR3-202ENST00000566296 WASHC2CQ9Y4E1 1318 aa26.18■■□□□ 1.78
TSR3-202ENST00000566296 POLR1AO95602 1720 aaPredicted RBP26.17■■□□□ 1.78
TSR3-202ENST00000566296 MAST1Q9Y2H9 1570 aa26.17■■□□□ 1.78
TSR3-202ENST00000566296 MAP3K1Q13233 1512 aa26.17■■□□□ 1.78
TSR3-202ENST00000566296 DISP3Q9P2K9 1392 aa26.15■■□□□ 1.78
TSR3-202ENST00000566296 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
TSR3-202ENST00000566296 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
TSR3-202ENST00000566296 FBXO31Q5XUX0 539 aaPredicted RBP26.13■■□□□ 1.77
TSR3-202ENST00000566296 ZC3H13Q5T200 1668 aaKnown RBP26.12■■□□□ 1.77
TSR3-202ENST00000566296 NLRP1Q9C000 1473 aa26.11■■□□□ 1.77
TSR3-202ENST00000566296 EIF2AK4Q9P2K8 1649 aaKnown RBP26.11■■□□□ 1.77
TSR3-202ENST00000566296 MYOM3Q5VTT5 1437 aa26.11■■□□□ 1.77
TSR3-202ENST00000566296 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
TSR3-202ENST00000566296 SPATA31D1Q6ZQQ2 1576 aa26.11■■□□□ 1.77
TSR3-202ENST00000566296 NEURL4Q96JN8 1562 aa26.09■■□□□ 1.77
TSR3-202ENST00000566296 UBAP1LF5GYI3 381 aa26.07■■□□□ 1.76
TSR3-202ENST00000566296 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
TSR3-202ENST00000566296 ABCC3O15438 1527 aa26.07■■□□□ 1.76
TSR3-202ENST00000566296 UGGT1Q9NYU2 1555 aa26.06■■□□□ 1.76
TSR3-202ENST00000566296 THEMISQ8N1K5 641 aaPredicted RBP26.03■■□□□ 1.76
TSR3-202ENST00000566296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.76
TSR3-202ENST00000566296 CPS1P31327 1500 aa26.03■■□□□ 1.76
TSR3-202ENST00000566296 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
TSR3-202ENST00000566296 DUOX2Q9NRD8 1548 aa26.02■■□□□ 1.76
TSR3-202ENST00000566296 MROH1Q8NDA8 1641 aa26■■□□□ 1.75
TSR3-202ENST00000566296 CEP152O94986 1710 aa26■■□□□ 1.75
TSR3-202ENST00000566296 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
TSR3-202ENST00000566296 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
TSR3-202ENST00000566296 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
TSR3-202ENST00000566296 SHANK2Q9UPX8 1470 aa25.98■■□□□ 1.75
TSR3-202ENST00000566296 APLP2Q06481 763 aa25.98■■□□□ 1.75
TSR3-202ENST00000566296 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
TSR3-202ENST00000566296 MED14O60244 1454 aa25.96■■□□□ 1.75
TSR3-202ENST00000566296 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
TSR3-202ENST00000566296 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
TSR3-202ENST00000566296 ILDR2Q71H61 639 aa25.94■■□□□ 1.74
TSR3-202ENST00000566296 VWDEQ8N2E2 1590 aa25.94■■□□□ 1.74
TSR3-202ENST00000566296 KIF15Q9NS87 1388 aa25.94■■□□□ 1.74
TSR3-202ENST00000566296 ERBINQ96RT1 1412 aa25.93■■□□□ 1.74
TSR3-202ENST00000566296 PRDM15P57071 1507 aaPredicted RBP25.93■■□□□ 1.74
TSR3-202ENST00000566296 CFAP65Q6ZU64 1925 aaKnown RBP25.92■■□□□ 1.74
TSR3-202ENST00000566296 ABCC5O15440 1437 aa25.9■■□□□ 1.74
TSR3-202ENST00000566296 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
TSR3-202ENST00000566296 TOM1O60784 492 aa25.88■■□□□ 1.73
TSR3-202ENST00000566296 UBR1Q8IWV7 1749 aa25.88■■□□□ 1.73
TSR3-202ENST00000566296 DAPK1P53355 1430 aa25.88■■□□□ 1.73
TSR3-202ENST00000566296 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
TSR3-202ENST00000566296 ARHGAP31Q2M1Z3 1444 aa25.85■■□□□ 1.73
TSR3-202ENST00000566296 SOCS7O14512 581 aa25.84■■□□□ 1.73
TSR3-202ENST00000566296 PIP4K2BP78356 416 aa25.84■■□□□ 1.73
TSR3-202ENST00000566296 RRP7BPQ9NSQ0 103 aa25.84■■□□□ 1.73
TSR3-202ENST00000566296 KANK1Q14678 1352 aa25.82■■□□□ 1.72
TSR3-202ENST00000566296 SYNMO15061 1565 aa25.82■■□□□ 1.72
TSR3-202ENST00000566296 SCAF11Q99590 1463 aaKnown RBP25.82■■□□□ 1.72
TSR3-202ENST00000566296 ANKRD30AQ9BXX3 1397 aa25.8■■□□□ 1.72
TSR3-202ENST00000566296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.79■■□□□ 1.72
TSR3-202ENST00000566296 HSPA1LP34931 641 aa25.78■■□□□ 1.72
TSR3-202ENST00000566296 SLIT1O75093 1534 aa25.78■■□□□ 1.72
TSR3-202ENST00000566296 STRCP1A6NGW2 1772 aa25.77■■□□□ 1.72
TSR3-202ENST00000566296 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
TSR3-202ENST00000566296 PIK3C2BO00750 1634 aa25.75■■□□□ 1.71
TSR3-202ENST00000566296 LRRC7Q96NW7 1537 aa25.74■■□□□ 1.71
TSR3-202ENST00000566296 LMTK2Q8IWU2 1503 aa25.73■■□□□ 1.71
TSR3-202ENST00000566296 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
TSR3-202ENST00000566296 TXNDC2Q86VQ3 553 aa25.72■■□□□ 1.71
TSR3-202ENST00000566296 EID1Q9Y6B2 187 aa25.72■■□□□ 1.71
TSR3-202ENST00000566296 MED1Q15648 1581 aaPredicted RBP25.72■■□□□ 1.71
TSR3-202ENST00000566296 ALKQ9UM73 1620 aa25.71■■□□□ 1.71
TSR3-202ENST00000566296 STAG3Q9UJ98 1225 aa25.71■■□□□ 1.71
TSR3-202ENST00000566296 KDM5AP29375 1690 aaKnown RBP25.7■■□□□ 1.7
TSR3-202ENST00000566296 EFCAB6Q5THR3 1501 aa25.68■■□□□ 1.7
TSR3-202ENST00000566296 ADGRL2O95490 1459 aa25.68■■□□□ 1.7
TSR3-202ENST00000566296 LTKP29376 864 aa25.68■■□□□ 1.7
TSR3-202ENST00000566296 TMEM2Q9UHN6 1383 aa25.68■■□□□ 1.7
TSR3-202ENST00000566296 FAM50AQ14320 339 aaKnown RBP25.64■■□□□ 1.7
TSR3-202ENST00000566296 ADGRB3O60242 1522 aa25.62■■□□□ 1.69
TSR3-202ENST00000566296 NOS1P29475 1434 aa25.62■■□□□ 1.69
TSR3-202ENST00000566296 IDI1Q13907 227 aa25.59■■□□□ 1.69
TSR3-202ENST00000566296 ANKRD50Q9ULJ7 1429 aa25.59■■□□□ 1.69
TSR3-202ENST00000566296 XIRP1Q702N8 1843 aaKnown RBP25.58■■□□□ 1.68
TSR3-202ENST00000566296 RPRD2Q5VT52 1461 aaKnown RBP25.57■■□□□ 1.68
TSR3-202ENST00000566296 SENP3Q9H4L4 574 aaPredicted RBP25.56■■□□□ 1.68
TSR3-202ENST00000566296 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
TSR3-202ENST00000566296 TET3O43151 1660 aa25.55■■□□□ 1.68
TSR3-202ENST00000566296 SLC52A1Q9NWF4 448 aa25.54■■□□□ 1.68
TSR3-202ENST00000566296 GCC2Q8IWJ2 1684 aa25.51■■□□□ 1.67
TSR3-202ENST00000566296 UNC13BO14795 1591 aa25.5■■□□□ 1.67
TSR3-202ENST00000566296 TMEM94Q12767 1356 aa25.49■■□□□ 1.67
TSR3-202ENST00000566296 KCNA6P17658 529 aa25.48■■□□□ 1.67
TSR3-202ENST00000566296 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
TSR3-202ENST00000566296 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
TSR3-202ENST00000566296 BCANQ96GW7 911 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms