RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
RAB40C-210ENST00000566290 CAMSAP1Q5T5Y3 1602 aa24.83■■□□□ 1.57
RAB40C-210ENST00000566290 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
RAB40C-210ENST00000566290 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
RAB40C-210ENST00000566290 CAMSAP2Q08AD1 1489 aa24.81■■□□□ 1.56
RAB40C-210ENST00000566290 ROCK1Q13464 1354 aa24.8■■□□□ 1.56
RAB40C-210ENST00000566290 SPAG9O60271 1321 aaKnown RBP24.8■■□□□ 1.56
RAB40C-210ENST00000566290 NAIPQ13075 1403 aa24.78■■□□□ 1.56
RAB40C-210ENST00000566290 INO80Q9ULG1 1556 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-210ENST00000566290 HSPA1LP34931 641 aa24.77■■□□□ 1.56
RAB40C-210ENST00000566290 AGLP35573 1532 aa24.76■■□□□ 1.55
RAB40C-210ENST00000566290 ATP7AQ04656 1500 aa24.76■■□□□ 1.55
RAB40C-210ENST00000566290 CROCC2H7BZ55 1655 aa24.76■■□□□ 1.55
RAB40C-210ENST00000566290 DAPK1P53355 1430 aa24.75■■□□□ 1.55
RAB40C-210ENST00000566290 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
RAB40C-210ENST00000566290 ADGBQ8N7X0 1667 aa24.72■■□□□ 1.55
RAB40C-210ENST00000566290 ADGRL2O95490 1459 aa24.72■■□□□ 1.55
RAB40C-210ENST00000566290 SHANK2Q9UPX8 1470 aa24.72■■□□□ 1.55
RAB40C-210ENST00000566290 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
RAB40C-210ENST00000566290 ITGAEP38570 1179 aa24.71■■□□□ 1.55
RAB40C-210ENST00000566290 ARHGEF5Q12774 1597 aa24.7■■□□□ 1.54
RAB40C-210ENST00000566290 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.54
RAB40C-210ENST00000566290 NPATQ14207 1427 aa24.69■■□□□ 1.54
RAB40C-210ENST00000566290 ZMYM3Q14202 1370 aa24.69■■□□□ 1.54
RAB40C-210ENST00000566290 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
RAB40C-210ENST00000566290 PIP4K2BP78356 416 aa24.69■■□□□ 1.54
RAB40C-210ENST00000566290 ABCC5O15440 1437 aa24.69■■□□□ 1.54
RAB40C-210ENST00000566290 PKD2Q13563 968 aa24.68■■□□□ 1.54
RAB40C-210ENST00000566290 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
RAB40C-210ENST00000566290 PLXNC1O60486 1568 aa24.65■■□□□ 1.54
RAB40C-210ENST00000566290 A2MP01023 1474 aa24.64■■□□□ 1.54
RAB40C-210ENST00000566290 RSPH4AQ5TD94 716 aa24.62■■□□□ 1.53
RAB40C-210ENST00000566290 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
RAB40C-210ENST00000566290 PLA2R1Q13018 1463 aa24.62■■□□□ 1.53
RAB40C-210ENST00000566290 MROH2AA6NES4 1674 aa24.61■■□□□ 1.53
RAB40C-210ENST00000566290 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
RAB40C-210ENST00000566290 TOM1O60784 492 aa24.58■■□□□ 1.53
RAB40C-210ENST00000566290 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
RAB40C-210ENST00000566290 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
RAB40C-210ENST00000566290 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
RAB40C-210ENST00000566290 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
RAB40C-210ENST00000566290 MYO3AQ8NEV4 1616 aa24.56■■□□□ 1.52
RAB40C-210ENST00000566290 ZNF142P52746 1687 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-210ENST00000566290 DHX29Q7Z478 1369 aaKnown RBP24.55■■□□□ 1.52
RAB40C-210ENST00000566290 CEP170BQ9Y4F5 1589 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-210ENST00000566290 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
RAB40C-210ENST00000566290 GGT6Q6P531 493 aa24.52■■□□□ 1.52
RAB40C-210ENST00000566290 ANKRD30AQ9BXX3 1397 aa24.47■■□□□ 1.51
RAB40C-210ENST00000566290 KIF3BO15066 747 aa24.46■■□□□ 1.51
RAB40C-210ENST00000566290 CPS1P31327 1500 aa24.45■■□□□ 1.51
RAB40C-210ENST00000566290 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
RAB40C-210ENST00000566290 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
RAB40C-210ENST00000566290 KDM5DQ9BY66 1539 aa24.42■■□□□ 1.5
RAB40C-210ENST00000566290 A2ML1A8K2U0 1454 aa24.41■■□□□ 1.5
RAB40C-210ENST00000566290 CHIC2Q9UKJ5 165 aa24.41■■□□□ 1.5
RAB40C-210ENST00000566290 RGS17Q9UGC6 210 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-210ENST00000566290 NEURL4Q96JN8 1562 aa24.39■■□□□ 1.5
RAB40C-210ENST00000566290 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.49
RAB40C-210ENST00000566290 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
RAB40C-210ENST00000566290 DUOX2Q9NRD8 1548 aa24.35■■□□□ 1.49
RAB40C-210ENST00000566290 VWDEQ8N2E2 1590 aa24.34■■□□□ 1.49
RAB40C-210ENST00000566290 POLR1AO95602 1720 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-210ENST00000566290 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
RAB40C-210ENST00000566290 ANKRD50Q9ULJ7 1429 aa24.34■■□□□ 1.49
RAB40C-210ENST00000566290 MROH1Q8NDA8 1641 aa24.33■■□□□ 1.49
RAB40C-210ENST00000566290 EIF2AK4Q9P2K8 1649 aaKnown RBP24.33■■□□□ 1.49
RAB40C-210ENST00000566290 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.49
RAB40C-210ENST00000566290 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
RAB40C-210ENST00000566290 PZPP20742 1482 aa24.3■■□□□ 1.48
RAB40C-210ENST00000566290 WASHC2CQ9Y4E1 1318 aa24.3■■□□□ 1.48
RAB40C-210ENST00000566290 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
RAB40C-210ENST00000566290 ERBINQ96RT1 1412 aa24.27■■□□□ 1.48
RAB40C-210ENST00000566290 UNC13BO14795 1591 aa24.27■■□□□ 1.48
RAB40C-210ENST00000566290 TNRQ92752 1358 aa24.27■■□□□ 1.48
RAB40C-210ENST00000566290 ABCC3O15438 1527 aa24.26■■□□□ 1.47
RAB40C-210ENST00000566290 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
RAB40C-210ENST00000566290 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
RAB40C-210ENST00000566290 NPHP4O75161 1426 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-210ENST00000566290 CEP152O94986 1710 aa24.21■■□□□ 1.47
RAB40C-210ENST00000566290 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
RAB40C-210ENST00000566290 POTEAQ6S8J7 498 aa24.21■■□□□ 1.47
RAB40C-210ENST00000566290 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-210ENST00000566290 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
RAB40C-210ENST00000566290 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.47
RAB40C-210ENST00000566290 RPRD2Q5VT52 1461 aaKnown RBP24.2■■□□□ 1.47
RAB40C-210ENST00000566290 ANKRD30BQ9BXX2 1392 aa24.2■■□□□ 1.46
RAB40C-210ENST00000566290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.46
RAB40C-210ENST00000566290 DEPDC5O75140 1603 aa24.2■■□□□ 1.46
RAB40C-210ENST00000566290 MED14O60244 1454 aa24.19■■□□□ 1.46
RAB40C-210ENST00000566290 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
RAB40C-210ENST00000566290 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
RAB40C-210ENST00000566290 TRIM52Q96A61 297 aa24.17■■□□□ 1.46
RAB40C-210ENST00000566290 SIN3AQ96ST3 1273 aa24.16■■□□□ 1.46
RAB40C-210ENST00000566290 IQGAP3Q86VI3 1631 aa24.14■■□□□ 1.46
RAB40C-210ENST00000566290 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
RAB40C-210ENST00000566290 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
RAB40C-210ENST00000566290 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
RAB40C-210ENST00000566290 ERVK-7P63135 1459 aa24.1■■□□□ 1.45
RAB40C-210ENST00000566290 NLRP1Q9C000 1473 aa24.08■■□□□ 1.45
RAB40C-210ENST00000566290 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms