RNA–Protein interactions for RNA: ENST00000566234.2

CDIP1-208, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-208ENST00000566234 PTPRTO14522 1441 aa20.55■□□□□ 0.88
CDIP1-208ENST00000566234 NCOA1Q15788 1441 aa20.55■□□□□ 0.88
CDIP1-208ENST00000566234 CERKQ8TCT0 537 aa20.55■□□□□ 0.88
CDIP1-208ENST00000566234 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
CDIP1-208ENST00000566234 TCOF1Q13428 1488 aaKnown RBP20.55■□□□□ 0.88
CDIP1-208ENST00000566234 RRP7BPQ9NSQ0 103 aa20.54■□□□□ 0.88
CDIP1-208ENST00000566234 STRCQ7RTU9 1775 aa20.54■□□□□ 0.88
CDIP1-208ENST00000566234 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
CDIP1-208ENST00000566234 SHANK2Q9UPX8 1470 aa20.53■□□□□ 0.88
CDIP1-208ENST00000566234 DAPK1P53355 1430 aa20.53■□□□□ 0.88
CDIP1-208ENST00000566234 PZPP20742 1482 aa20.52■□□□□ 0.88
CDIP1-208ENST00000566234 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.87
CDIP1-208ENST00000566234 TNRQ92752 1358 aa20.51■□□□□ 0.87
CDIP1-208ENST00000566234 CAMSAP1Q5T5Y3 1602 aa20.51■□□□□ 0.87
CDIP1-208ENST00000566234 NCKAP5LQ9HCH0 1330 aa20.51■□□□□ 0.87
CDIP1-208ENST00000566234 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
CDIP1-208ENST00000566234 PKD2Q13563 968 aa20.49■□□□□ 0.87
CDIP1-208ENST00000566234 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
CDIP1-208ENST00000566234 CEP170BQ9Y4F5 1589 aaPredicted RBP20.48■□□□□ 0.87
CDIP1-208ENST00000566234 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
CDIP1-208ENST00000566234 A2ML1A8K2U0 1454 aa20.48■□□□□ 0.87
CDIP1-208ENST00000566234 RNF17Q9BXT8 1623 aaKnown RBP20.47■□□□□ 0.87
CDIP1-208ENST00000566234 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
CDIP1-208ENST00000566234 EIF2AK4Q9P2K8 1649 aaKnown RBP20.46■□□□□ 0.87
CDIP1-208ENST00000566234 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
CDIP1-208ENST00000566234 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
CDIP1-208ENST00000566234 ABCC3O15438 1527 aa20.46■□□□□ 0.87
CDIP1-208ENST00000566234 DNMT1P26358 1616 aaKnown RBP20.45■□□□□ 0.87
CDIP1-208ENST00000566234 ZNF142P52746 1687 aaPredicted RBP20.45■□□□□ 0.86
CDIP1-208ENST00000566234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDIP1-208ENST00000566234 THEMISQ8N1K5 641 aaPredicted RBP20.42■□□□□ 0.86
CDIP1-208ENST00000566234 MROH1Q8NDA8 1641 aa20.42■□□□□ 0.86
CDIP1-208ENST00000566234 CROCC2H7BZ55 1655 aa20.42■□□□□ 0.86
CDIP1-208ENST00000566234 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
CDIP1-208ENST00000566234 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
CDIP1-208ENST00000566234 KANK1Q14678 1352 aa20.38■□□□□ 0.85
CDIP1-208ENST00000566234 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
CDIP1-208ENST00000566234 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
CDIP1-208ENST00000566234 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
CDIP1-208ENST00000566234 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
CDIP1-208ENST00000566234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
CDIP1-208ENST00000566234 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
CDIP1-208ENST00000566234 SPATA31D1Q6ZQQ2 1576 aa20.36■□□□□ 0.85
CDIP1-208ENST00000566234 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
CDIP1-208ENST00000566234 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
CDIP1-208ENST00000566234 LTBP4Q8N2S1 1624 aa20.35■□□□□ 0.85
CDIP1-208ENST00000566234 UGGT1Q9NYU2 1555 aa20.34■□□□□ 0.85
CDIP1-208ENST00000566234 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
CDIP1-208ENST00000566234 DEPDC5O75140 1603 aa20.3■□□□□ 0.84
CDIP1-208ENST00000566234 CEP152O94986 1710 aa20.29■□□□□ 0.84
CDIP1-208ENST00000566234 LMTK2Q8IWU2 1503 aa20.28■□□□□ 0.84
CDIP1-208ENST00000566234 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
CDIP1-208ENST00000566234 IQSEC2Q5JU85 1478 aa20.26■□□□□ 0.83
CDIP1-208ENST00000566234 ROCK1Q13464 1354 aa20.26■□□□□ 0.83
CDIP1-208ENST00000566234 ITGAEP38570 1179 aa20.26■□□□□ 0.83
CDIP1-208ENST00000566234 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
CDIP1-208ENST00000566234 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
CDIP1-208ENST00000566234 MED14O60244 1454 aa20.24■□□□□ 0.83
CDIP1-208ENST00000566234 IDI1Q13907 227 aa20.22■□□□□ 0.83
CDIP1-208ENST00000566234 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
CDIP1-208ENST00000566234 LTKP29376 864 aa20.2■□□□□ 0.82
CDIP1-208ENST00000566234 TXNDC2Q86VQ3 553 aa20.2■□□□□ 0.82
CDIP1-208ENST00000566234 POLR1AO95602 1720 aaPredicted RBP20.19■□□□□ 0.82
CDIP1-208ENST00000566234 NOS1P29475 1434 aa20.19■□□□□ 0.82
CDIP1-208ENST00000566234 EFCAB6Q5THR3 1501 aa20.18■□□□□ 0.82
CDIP1-208ENST00000566234 UBAP1LF5GYI3 381 aa20.18■□□□□ 0.82
CDIP1-208ENST00000566234 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
CDIP1-208ENST00000566234 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
CDIP1-208ENST00000566234 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
CDIP1-208ENST00000566234 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
CDIP1-208ENST00000566234 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
CDIP1-208ENST00000566234 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
CDIP1-208ENST00000566234 SLIT1O75093 1534 aa20.16■□□□□ 0.82
CDIP1-208ENST00000566234 RPRD2Q5VT52 1461 aaKnown RBP20.15■□□□□ 0.82
CDIP1-208ENST00000566234 CPS1P31327 1500 aa20.14■□□□□ 0.81
CDIP1-208ENST00000566234 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
CDIP1-208ENST00000566234 SYNMO15061 1565 aa20.13■□□□□ 0.81
CDIP1-208ENST00000566234 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
CDIP1-208ENST00000566234 PIK3C2BO00750 1634 aa20.13■□□□□ 0.81
CDIP1-208ENST00000566234 NUP155O75694 1391 aa20.12■□□□□ 0.81
CDIP1-208ENST00000566234 IQGAP1P46940 1657 aa20.11■□□□□ 0.81
CDIP1-208ENST00000566234 UNC13BO14795 1591 aa20.1■□□□□ 0.81
CDIP1-208ENST00000566234 TET3O43151 1660 aa20.07■□□□□ 0.8
CDIP1-208ENST00000566234 TOM1O60784 492 aa20.07■□□□□ 0.8
CDIP1-208ENST00000566234 KDM5AP29375 1690 aaKnown RBP20.05■□□□□ 0.8
CDIP1-208ENST00000566234 ADGRB3O60242 1522 aa20.05■□□□□ 0.8
CDIP1-208ENST00000566234 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
CDIP1-208ENST00000566234 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
CDIP1-208ENST00000566234 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.8
CDIP1-208ENST00000566234 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.8
CDIP1-208ENST00000566234 PIP4K2BP78356 416 aa20.02■□□□□ 0.8
CDIP1-208ENST00000566234 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
CDIP1-208ENST00000566234 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.79
CDIP1-208ENST00000566234 BCANQ96GW7 911 aa20.01■□□□□ 0.79
CDIP1-208ENST00000566234 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
CDIP1-208ENST00000566234 NAIPQ13075 1403 aa20■□□□□ 0.79
CDIP1-208ENST00000566234 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
CDIP1-208ENST00000566234 E9PCH4 1651 aa19.98■□□□□ 0.79
CDIP1-208ENST00000566234 KCNA6P17658 529 aa19.98■□□□□ 0.79
CDIP1-208ENST00000566234 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms