RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 ILDR2Q71H61 639 aa10.4□□□□□ -0.74
UBE3A-205ENST00000566215 HSPA2P54652 639 aa10.4□□□□□ -0.75
UBE3A-205ENST00000566215 MROH1Q8NDA8 1641 aa10.39□□□□□ -0.75
UBE3A-205ENST00000566215 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
UBE3A-205ENST00000566215 ARHGAP31Q2M1Z3 1444 aa10.38□□□□□ -0.75
UBE3A-205ENST00000566215 LRRC9Q6ZRR7 1453 aa10.38□□□□□ -0.75
UBE3A-205ENST00000566215 UGGT1Q9NYU2 1555 aa10.38□□□□□ -0.75
UBE3A-205ENST00000566215 LMTK2Q8IWU2 1503 aa10.37□□□□□ -0.75
UBE3A-205ENST00000566215 PRDM15P57071 1507 aaPredicted RBP10.37□□□□□ -0.75
UBE3A-205ENST00000566215 ABCC3O15438 1527 aa10.37□□□□□ -0.75
UBE3A-205ENST00000566215 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
UBE3A-205ENST00000566215 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
UBE3A-205ENST00000566215 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
UBE3A-205ENST00000566215 CCDC141Q6ZP82 1450 aa10.35□□□□□ -0.75
UBE3A-205ENST00000566215 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
UBE3A-205ENST00000566215 NCOA3Q9Y6Q9 1424 aa10.32□□□□□ -0.76
UBE3A-205ENST00000566215 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
UBE3A-205ENST00000566215 NPHP4O75161 1426 aaPredicted RBP10.3□□□□□ -0.76
UBE3A-205ENST00000566215 AFAP1Q8N556 730 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 TNRQ92752 1358 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 DIP2AQ14689 1571 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 LAMC1P11047 1609 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
UBE3A-205ENST00000566215 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
UBE3A-205ENST00000566215 TET3O43151 1660 aa10.29□□□□□ -0.76
UBE3A-205ENST00000566215 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
UBE3A-205ENST00000566215 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
UBE3A-205ENST00000566215 DUOX2Q9NRD8 1548 aa10.29□□□□□ -0.76
UBE3A-205ENST00000566215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
UBE3A-205ENST00000566215 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
UBE3A-205ENST00000566215 SETD1AO15047 1707 aaKnown RBP10.28□□□□□ -0.76
UBE3A-205ENST00000566215 CDK12Q9NYV4 1490 aaPredicted RBP10.27□□□□□ -0.76
UBE3A-205ENST00000566215 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
UBE3A-205ENST00000566215 ERBINQ96RT1 1412 aa10.26□□□□□ -0.77
UBE3A-205ENST00000566215 CEP152O94986 1710 aa10.26□□□□□ -0.77
UBE3A-205ENST00000566215 TOM1O60784 492 aa10.26□□□□□ -0.77
UBE3A-205ENST00000566215 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
UBE3A-205ENST00000566215 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
UBE3A-205ENST00000566215 CHD2O14647 1828 aaKnown RBP10.25□□□□□ -0.77
UBE3A-205ENST00000566215 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
UBE3A-205ENST00000566215 CCNB3Q8WWL7 1395 aa10.24□□□□□ -0.77
UBE3A-205ENST00000566215 SCAF11Q99590 1463 aaKnown RBP10.24□□□□□ -0.77
UBE3A-205ENST00000566215 RPRD2Q5VT52 1461 aaKnown RBP10.23□□□□□ -0.77
UBE3A-205ENST00000566215 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
UBE3A-205ENST00000566215 GCC2Q8IWJ2 1684 aa10.22□□□□□ -0.77
UBE3A-205ENST00000566215 ADGRB3O60242 1522 aa10.22□□□□□ -0.77
UBE3A-205ENST00000566215 FGD6Q6ZV73 1430 aa10.22□□□□□ -0.77
UBE3A-205ENST00000566215 THEMISQ8N1K5 641 aaPredicted RBP10.21□□□□□ -0.77
UBE3A-205ENST00000566215 EFCAB6Q5THR3 1501 aa10.21□□□□□ -0.78
UBE3A-205ENST00000566215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.21□□□□□ -0.786e-7■□□□□ 8.4
UBE3A-205ENST00000566215 COL16A1Q07092 1604 aaPredicted RBP10.21□□□□□ -0.78
UBE3A-205ENST00000566215 IQGAP3Q86VI3 1631 aa10.21□□□□□ -0.78
UBE3A-205ENST00000566215 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
UBE3A-205ENST00000566215 ROBO1Q9Y6N7 1651 aa10.2□□□□□ -0.78
UBE3A-205ENST00000566215 MLECQ14165 292 aa10.2□□□□□ -0.78
UBE3A-205ENST00000566215 UBAP1LF5GYI3 381 aa10.19□□□□□ -0.78
UBE3A-205ENST00000566215 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
UBE3A-205ENST00000566215 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
UBE3A-205ENST00000566215 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
UBE3A-205ENST00000566215 NHSL1Q5SYE7 1610 aa10.18□□□□□ -0.78
UBE3A-205ENST00000566215 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
UBE3A-205ENST00000566215 PHLPP1O60346 1717 aa10.17□□□□□ -0.78
UBE3A-205ENST00000566215 UNC13BO14795 1591 aa10.17□□□□□ -0.78
UBE3A-205ENST00000566215 NOS1P29475 1434 aa10.16□□□□□ -0.78
UBE3A-205ENST00000566215 DCCP43146 1447 aa10.15□□□□□ -0.78
UBE3A-205ENST00000566215 PIK3R4Q99570 1358 aa10.15□□□□□ -0.79
UBE3A-205ENST00000566215 HSPA1LP34931 641 aa10.14□□□□□ -0.79
UBE3A-205ENST00000566215 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
UBE3A-205ENST00000566215 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
UBE3A-205ENST00000566215 TMEM131LA2VDJ0 1609 aa10.13□□□□□ -0.79
UBE3A-205ENST00000566215 MYOM3Q5VTT5 1437 aa10.13□□□□□ -0.79
UBE3A-205ENST00000566215 COL22A1Q8NFW1 1626 aaPredicted RBP10.12□□□□□ -0.79
UBE3A-205ENST00000566215 MTUS2Q5JR59 1369 aa10.12□□□□□ -0.79
UBE3A-205ENST00000566215 SPHKAPQ2M3C7 1700 aa10.11□□□□□ -0.79
UBE3A-205ENST00000566215 ZFYVE9O95405 1425 aa10.11□□□□□ -0.79
UBE3A-205ENST00000566215 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.1□□□□□ -0.79
UBE3A-205ENST00000566215 TMEM2Q9UHN6 1383 aa10.1□□□□□ -0.79
UBE3A-205ENST00000566215 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.795e-8■■■■□ 26.4
UBE3A-205ENST00000566215 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
UBE3A-205ENST00000566215 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
UBE3A-205ENST00000566215 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
UBE3A-205ENST00000566215 TRPM2O94759 1503 aa10.07□□□□□ -0.8
UBE3A-205ENST00000566215 PLEKHG1Q9ULL1 1385 aa10.07□□□□□ -0.8
UBE3A-205ENST00000566215 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
UBE3A-205ENST00000566215 RGS17Q9UGC6 210 aaPredicted RBP10.06□□□□□ -0.8
UBE3A-205ENST00000566215 JCADQ9P266 1359 aa10.05□□□□□ -0.8
UBE3A-205ENST00000566215 LRP5O75197 1615 aa10.05□□□□□ -0.8
UBE3A-205ENST00000566215 VPS8Q8N3P4 1428 aa10.05□□□□□ -0.8
UBE3A-205ENST00000566215 KCNA6P17658 529 aa10.04□□□□□ -0.8
UBE3A-205ENST00000566215 MYO5BQ9ULV0 1848 aa10.04□□□□□ -0.8
UBE3A-205ENST00000566215 UBTFP17480 764 aaKnown RBP10.04□□□□□ -0.8
UBE3A-205ENST00000566215 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
UBE3A-205ENST00000566215 NRXN3Q9Y4C0 1643 aa10.04□□□□□ -0.8
UBE3A-205ENST00000566215 SETD5Q9C0A6 1442 aa10.03□□□□□ -0.8
UBE3A-205ENST00000566215 E9PCH4 1651 aa10□□□□□ -0.81
UBE3A-205ENST00000566215 ABCC5O15440 1437 aa10□□□□□ -0.81
UBE3A-205ENST00000566215 DAPK1P53355 1430 aa10□□□□□ -0.81
UBE3A-205ENST00000566215 GGT6Q6P531 493 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms