RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC01043-201ENST00000565936 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
LINC01043-201ENST00000565936 IRX6P78412 446 aaPredicted RBP8.28□□□□□ -1.08
LINC01043-201ENST00000565936 FGD6Q6ZV73 1430 aa8.27□□□□□ -1.08
LINC01043-201ENST00000565936 GPATCH3Q96I76 525 aa8.27□□□□□ -1.09
LINC01043-201ENST00000565936 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
LINC01043-201ENST00000565936 GTF2E1P29083 439 aaPredicted RBP8.27□□□□□ -1.09
LINC01043-201ENST00000565936 HECW1Q76N89 1606 aa8.27□□□□□ -1.09
LINC01043-201ENST00000565936 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 LTV1Q96GA3 475 aaPredicted RBP8.26□□□□□ -1.09
LINC01043-201ENST00000565936 MIA2Q96PC5 1412 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 HMMRO75330 724 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 KIAA0586Q9BVV6 1533 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 RRBP1Q9P2E9 1410 aaKnown RBP8.26□□□□□ -1.09
LINC01043-201ENST00000565936 ANKRD50Q9ULJ7 1429 aa8.26□□□□□ -1.09
LINC01043-201ENST00000565936 GORABQ5T7V8 394 aa8.25□□□□□ -1.09
LINC01043-201ENST00000565936 SUPT16HQ9Y5B9 1047 aaKnown RBP8.25□□□□□ -1.09
LINC01043-201ENST00000565936 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
LINC01043-201ENST00000565936 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
LINC01043-201ENST00000565936 LRRC9Q6ZRR7 1453 aa8.25□□□□□ -1.09
LINC01043-201ENST00000565936 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
LINC01043-201ENST00000565936 EHBP1L1Q8N3D4 1523 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 GLIPR1L2Q4G1C9 344 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 BICRAQ9NZM4 1560 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 TTC5Q8N0Z6 440 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 GPRASP1Q5JY77 1395 aa8.24□□□□□ -1.09
LINC01043-201ENST00000565936 NAP1L2Q9ULW6 460 aaPredicted RBP8.23□□□□□ -1.09
LINC01043-201ENST00000565936 TEFQ10587 303 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 TXNDC2Q86VQ3 553 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 TROQ12816 1431 aaPredicted RBP8.23□□□□□ -1.09
LINC01043-201ENST00000565936 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 RWDD1Q9H446 243 aaPredicted RBP8.23□□□□□ -1.09
LINC01043-201ENST00000565936 SLC52A1Q9NWF4 448 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
LINC01043-201ENST00000565936 CUL7Q14999 1698 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 ABCA10Q8WWZ4 1543 aa8.23□□□□□ -1.09
LINC01043-201ENST00000565936 CENPJQ9HC77 1338 aaPredicted RBP8.23□□□□□ -1.09
LINC01043-201ENST00000565936 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
LINC01043-201ENST00000565936 DCAF8L1A6NGE4 600 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 ANKLE2Q86XL3 938 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 AFAP1Q8N556 730 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 PROSER2Q86WR7 435 aaPredicted RBP8.22□□□□□ -1.09
LINC01043-201ENST00000565936 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 WASHC2AQ641Q2 1341 aa8.22□□□□□ -1.09
LINC01043-201ENST00000565936 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 RGS3P49796 1198 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 HSP90AB1P08238 724 aaKnown RBP8.21□□□□□ -1.1
LINC01043-201ENST00000565936 PMFBP1Q8TBY8 1022 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 SMC4Q9NTJ3 1288 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
LINC01043-201ENST00000565936 HFM1A2PYH4 1435 aa8.21□□□□□ -1.1
LINC01043-201ENST00000565936 PANK3Q9H999 370 aa8.2□□□□□ -1.1
LINC01043-201ENST00000565936 IQGAP2Q13576 1575 aa8.2□□□□□ -1.1
LINC01043-201ENST00000565936 MSH5O43196 834 aa8.2□□□□□ -1.1
LINC01043-201ENST00000565936 RAPGEF4Q8WZA2 1011 aa8.2□□□□□ -1.1
LINC01043-201ENST00000565936 USP47Q96K76 1375 aa8.2□□□□□ -1.1
LINC01043-201ENST00000565936 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 ZNF644Q9H582 1327 aaPredicted RBP8.19□□□□□ -1.1
LINC01043-201ENST00000565936 GOLGA6L6A8MZA4 724 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
LINC01043-201ENST00000565936 ERICH6BQ5W0A0 696 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 SCAPERQ9BY12 1400 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 RCAN3Q9UKA8 241 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 C9orf84Q5VXU9 1444 aa8.19□□□□□ -1.1
LINC01043-201ENST00000565936 DIAPH1O60610 1272 aaKnown RBP8.19□□□□□ -1.1
LINC01043-201ENST00000565936 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
LINC01043-201ENST00000565936 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
LINC01043-201ENST00000565936 GNL2Q13823 731 aaKnown RBP8.18□□□□□ -1.1
LINC01043-201ENST00000565936 DDX58O95786 925 aaKnown RBP8.18□□□□□ -1.1
LINC01043-201ENST00000565936 HSCBQ8IWL3 235 aa8.18□□□□□ -1.1
LINC01043-201ENST00000565936 PRXQ9BXM0 1461 aa8.18□□□□□ -1.1
LINC01043-201ENST00000565936 CD109Q6YHK3 1445 aa8.18□□□□□ -1.1
LINC01043-201ENST00000565936 LRRFIP1Q32MZ4 808 aaKnown RBP8.18□□□□□ -1.1
LINC01043-201ENST00000565936 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
LINC01043-201ENST00000565936 SLC4A10Q6U841 1118 aa8.17□□□□□ -1.1
LINC01043-201ENST00000565936 GRIN2AQ12879 1464 aa8.17□□□□□ -1.1
LINC01043-201ENST00000565936 PHF23Q9BUL5 403 aaPredicted RBP8.17□□□□□ -1.1
LINC01043-201ENST00000565936 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
LINC01043-201ENST00000565936 NRDCO43847 1150 aa8.17□□□□□ -1.1
LINC01043-201ENST00000565936 SUPT6HQ7KZ85 1726 aaKnown RBP8.16□□□□□ -1.1
LINC01043-201ENST00000565936 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
LINC01043-201ENST00000565936 PPP6R1Q9UPN7 881 aa8.16□□□□□ -1.1
LINC01043-201ENST00000565936 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
LINC01043-201ENST00000565936 HTATSF1O43719 755 aaKnown RBP8.16□□□□□ -1.1
LINC01043-201ENST00000565936 HSP90B1P14625 803 aaKnown RBP8.16□□□□□ -1.1
LINC01043-201ENST00000565936 SMG6Q86US8 1419 aaKnown RBP8.16□□□□□ -1.1
LINC01043-201ENST00000565936 SYTL4Q96C24 671 aaPredicted RBP8.15□□□□□ -1.1
LINC01043-201ENST00000565936 PEG3Q9GZU2 1588 aa8.15□□□□□ -1.1
LINC01043-201ENST00000565936 ESCO1Q5FWF5 840 aa8.15□□□□□ -1.1
LINC01043-201ENST00000565936 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
LINC01043-201ENST00000565936 NOL10Q9BSC4 688 aaKnown RBP8.15□□□□□ -1.1
LINC01043-201ENST00000565936 TRIM44Q96DX7 344 aaPredicted RBP8.15□□□□□ -1.1
LINC01043-201ENST00000565936 ZNF692Q9BU19 519 aaPredicted RBP8.15□□□□□ -1.1
LINC01043-201ENST00000565936 APBB1O00213 710 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms