RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 KIF15Q9NS87 1388 aa37.15■■■■□ 3.54
TCF4-230ENST00000565908 WASHC2CQ9Y4E1 1318 aa37.14■■■■□ 3.54
TCF4-230ENST00000565908 KDM5DQ9BY66 1539 aa37.14■■■■□ 3.54
TCF4-230ENST00000565908 PTPRKQ15262 1439 aa37.13■■■■□ 3.53
TCF4-230ENST00000565908 FAM50AQ14320 339 aaKnown RBP37.12■■■■□ 3.53
TCF4-230ENST00000565908 EIF2AK4Q9P2K8 1649 aaKnown RBP37.11■■■■□ 3.53
TCF4-230ENST00000565908 RRP7BPQ9NSQ0 103 aa37.11■■■■□ 3.53
TCF4-230ENST00000565908 RNF17Q9BXT8 1623 aaKnown RBP37.08■■■■□ 3.53
TCF4-230ENST00000565908 ANKRD30AQ9BXX3 1397 aa37.07■■■■□ 3.53
TCF4-230ENST00000565908 CHIC2Q9UKJ5 165 aa37.06■■■■□ 3.52
TCF4-230ENST00000565908 ERBINQ96RT1 1412 aa37.05■■■■□ 3.52
TCF4-230ENST00000565908 PZPP20742 1482 aa37.01■■■■□ 3.52
TCF4-230ENST00000565908 NCOA1Q15788 1441 aa37■■■■□ 3.51
TCF4-230ENST00000565908 PPARGC1BQ86YN6 1023 aaKnown RBP36.99■■■■□ 3.51
TCF4-230ENST00000565908 ADGRL2O95490 1459 aa36.97■■■■□ 3.51
TCF4-230ENST00000565908 DMRT2Q9Y5R5 561 aa36.97■■■■□ 3.51
TCF4-230ENST00000565908 ABCC3O15438 1527 aa36.96■■■■□ 3.51
TCF4-230ENST00000565908 MROH1Q8NDA8 1641 aa36.96■■■■□ 3.51
TCF4-230ENST00000565908 MYO3AQ8NEV4 1616 aa36.96■■■■□ 3.51
TCF4-230ENST00000565908 FBXO31Q5XUX0 539 aaPredicted RBP36.95■■■■□ 3.51
TCF4-230ENST00000565908 ZC3H13Q5T200 1668 aaKnown RBP36.94■■■■□ 3.5
TCF4-230ENST00000565908 TNRQ92752 1358 aa36.93■■■■□ 3.5
TCF4-230ENST00000565908 CEP170BQ9Y4F5 1589 aaPredicted RBP36.91■■■■□ 3.5
TCF4-230ENST00000565908 ZNF142P52746 1687 aaPredicted RBP36.9■■■■□ 3.5
TCF4-230ENST00000565908 STRCQ7RTU9 1775 aa36.89■■■■□ 3.5
TCF4-230ENST00000565908 PRDM15P57071 1507 aaPredicted RBP36.89■■■■□ 3.5
TCF4-230ENST00000565908 A2ML1A8K2U0 1454 aa36.87■■■■□ 3.49
TCF4-230ENST00000565908 CAMSAP1Q5T5Y3 1602 aa36.86■■■■□ 3.49
TCF4-230ENST00000565908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.85■■■■□ 3.49
TCF4-230ENST00000565908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.85■■■■□ 3.49
TCF4-230ENST00000565908 KANK1Q14678 1352 aa36.84■■■■□ 3.49
TCF4-230ENST00000565908 DEPDC5O75140 1603 aa36.82■■■■□ 3.49
TCF4-230ENST00000565908 PTPRTO14522 1441 aa36.82■■■■□ 3.48
TCF4-230ENST00000565908 PLA2R1Q13018 1463 aa36.81■■■■□ 3.48
TCF4-230ENST00000565908 CEP152O94986 1710 aa36.79■■■■□ 3.48
TCF4-230ENST00000565908 ANKRD50Q9ULJ7 1429 aa36.79■■■■□ 3.48
TCF4-230ENST00000565908 NLRP1Q9C000 1473 aa36.78■■■■□ 3.48
TCF4-230ENST00000565908 SPATA31D1Q6ZQQ2 1576 aa36.77■■■■□ 3.48
TCF4-230ENST00000565908 ROCK1Q13464 1354 aa36.77■■■■□ 3.48
TCF4-230ENST00000565908 ARHGAP31Q2M1Z3 1444 aa36.76■■■■□ 3.48
TCF4-230ENST00000565908 ERVK-7P63135 1459 aa36.76■■■■□ 3.48
TCF4-230ENST00000565908 PKD2Q13563 968 aa36.76■■■■□ 3.48
TCF4-230ENST00000565908 ILDR1Q86SU0 546 aaPredicted RBP36.76■■■■□ 3.48
TCF4-230ENST00000565908 NCKAP5LQ9HCH0 1330 aa36.73■■■■□ 3.47
TCF4-230ENST00000565908 ITGAEP38570 1179 aa36.72■■■■□ 3.47
TCF4-230ENST00000565908 VWDEQ8N2E2 1590 aa36.7■■■■□ 3.47
TCF4-230ENST00000565908 LMTK2Q8IWU2 1503 aa36.7■■■■□ 3.47
TCF4-230ENST00000565908 RRBP1Q9P2E9 1410 aaKnown RBP36.68■■■■□ 3.46
TCF4-230ENST00000565908 THEMISQ8N1K5 641 aaPredicted RBP36.68■■■■□ 3.46
TCF4-230ENST00000565908 UGGT1Q9NYU2 1555 aa36.66■■■■□ 3.46
TCF4-230ENST00000565908 CERKQ8TCT0 537 aa36.63■■■■□ 3.45
TCF4-230ENST00000565908 FBXO41Q8TF61 875 aa36.63■■■■□ 3.45
TCF4-230ENST00000565908 ANKLE2Q86XL3 938 aa36.57■■■■□ 3.44
TCF4-230ENST00000565908 EFCAB6Q5THR3 1501 aa36.56■■■■□ 3.44
TCF4-230ENST00000565908 CFAP65Q6ZU64 1925 aaKnown RBP36.54■■■■□ 3.44
TCF4-230ENST00000565908 UNC13BO14795 1591 aa36.53■■■■□ 3.44
TCF4-230ENST00000565908 RPRD2Q5VT52 1461 aaKnown RBP36.49■■■■□ 3.43
TCF4-230ENST00000565908 NOS1P29475 1434 aa36.47■■■■□ 3.43
TCF4-230ENST00000565908 POLR1AO95602 1720 aaPredicted RBP36.47■■■■□ 3.43
TCF4-230ENST00000565908 NEURL4Q96JN8 1562 aa36.46■■■■□ 3.43
TCF4-230ENST00000565908 LTBP4Q8N2S1 1624 aa36.45■■■■□ 3.43
TCF4-230ENST00000565908 UBR1Q8IWV7 1749 aa36.44■■■■□ 3.42
TCF4-230ENST00000565908 TET3O43151 1660 aa36.44■■■■□ 3.42
TCF4-230ENST00000565908 ZNF335Q9H4Z2 1342 aaPredicted RBP36.42■■■■□ 3.42
TCF4-230ENST00000565908 IDI1Q13907 227 aa36.42■■■■□ 3.42
TCF4-230ENST00000565908 MED14O60244 1454 aa36.42■■■■□ 3.42
TCF4-230ENST00000565908 NUP155O75694 1391 aa36.41■■■■□ 3.42
TCF4-230ENST00000565908 STAG3Q9UJ98 1225 aa36.41■■■■□ 3.42
TCF4-230ENST00000565908 NPHP4O75161 1426 aaPredicted RBP36.41■■■■□ 3.42
TCF4-230ENST00000565908 SLC52A1Q9NWF4 448 aa36.4■■■■□ 3.42
TCF4-230ENST00000565908 SYNMO15061 1565 aa36.4■■■■□ 3.42
TCF4-230ENST00000565908 PIK3C2BO00750 1634 aa36.37■■■■□ 3.41
TCF4-230ENST00000565908 IQGAP3Q86VI3 1631 aa36.37■■■■□ 3.41
TCF4-230ENST00000565908 GCC2Q8IWJ2 1684 aa36.36■■■■□ 3.41
TCF4-230ENST00000565908 ARHGAP23Q9P227 1491 aa36.36■■■■□ 3.41
TCF4-230ENST00000565908 SLIT1O75093 1534 aa36.35■■■■□ 3.41
TCF4-230ENST00000565908 NAIPQ13075 1403 aa36.34■■■■□ 3.41
TCF4-230ENST00000565908 SCAF11Q99590 1463 aaKnown RBP36.32■■■■□ 3.41
TCF4-230ENST00000565908 TXNDC2Q86VQ3 553 aa36.32■■■■□ 3.4
TCF4-230ENST00000565908 IQSEC2Q5JU85 1478 aa36.31■■■■□ 3.4
TCF4-230ENST00000565908 EID1Q9Y6B2 187 aa36.31■■■■□ 3.4
TCF4-230ENST00000565908 KDM5AP29375 1690 aaKnown RBP36.31■■■■□ 3.4
TCF4-230ENST00000565908 TMEM2Q9UHN6 1383 aa36.3■■■■□ 3.4
TCF4-230ENST00000565908 LTKP29376 864 aa36.28■■■■□ 3.4
TCF4-230ENST00000565908 IQGAP1P46940 1657 aa36.28■■■■□ 3.4
TCF4-230ENST00000565908 HFM1A2PYH4 1435 aa36.27■■■■□ 3.4
TCF4-230ENST00000565908 ADGRB3O60242 1522 aa36.26■■■■□ 3.4
TCF4-230ENST00000565908 E9PCH4 1651 aa36.26■■■■□ 3.39
TCF4-230ENST00000565908 CPS1P31327 1500 aa36.19■■■■□ 3.38
TCF4-230ENST00000565908 CHGAP10645 457 aaKnown RBP36.11■■■■□ 3.37
TCF4-230ENST00000565908 TRIM52Q96A61 297 aa36.11■■■■□ 3.37
TCF4-230ENST00000565908 TMEM131LA2VDJ0 1609 aa36.1■■■■□ 3.37
TCF4-230ENST00000565908 HDGFP51858 240 aaKnown RBP36.1■■■■□ 3.37
TCF4-230ENST00000565908 ZFYVE9O95405 1425 aa36.06■■■■□ 3.36
TCF4-230ENST00000565908 RIMS2Q9UQ26 1411 aa36.05■■■■□ 3.36
TCF4-230ENST00000565908 UBAP1LF5GYI3 381 aa36.04■■■■□ 3.36
TCF4-230ENST00000565908 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.02■■■■□ 3.36
TCF4-230ENST00000565908 SPHKAPQ2M3C7 1700 aa36.01■■■■□ 3.36
TCF4-230ENST00000565908 PPP1R15AO75807 674 aaPredicted RBP36.01■■■■□ 3.36
TCF4-230ENST00000565908 BCANQ96GW7 911 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms