RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
NR4A1-221ENST00000565848 NAIPQ13075 1403 aa18.79■□□□□ 0.6
NR4A1-221ENST00000565848 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
NR4A1-221ENST00000565848 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
NR4A1-221ENST00000565848 DUOX2Q9NRD8 1548 aa18.75■□□□□ 0.59
NR4A1-221ENST00000565848 ITGAEP38570 1179 aa18.75■□□□□ 0.59
NR4A1-221ENST00000565848 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
NR4A1-221ENST00000565848 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
NR4A1-221ENST00000565848 KIF15Q9NS87 1388 aa18.73■□□□□ 0.59
NR4A1-221ENST00000565848 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
NR4A1-221ENST00000565848 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
NR4A1-221ENST00000565848 ERBINQ96RT1 1412 aa18.71■□□□□ 0.59
NR4A1-221ENST00000565848 ATP10AO60312 1499 aa18.71■□□□□ 0.59
NR4A1-221ENST00000565848 DHX29Q7Z478 1369 aaKnown RBP18.7■□□□□ 0.58
NR4A1-221ENST00000565848 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
NR4A1-221ENST00000565848 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
NR4A1-221ENST00000565848 A2MP01023 1474 aa18.7■□□□□ 0.58
NR4A1-221ENST00000565848 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
NR4A1-221ENST00000565848 AGLP35573 1532 aa18.69■□□□□ 0.58
NR4A1-221ENST00000565848 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
NR4A1-221ENST00000565848 DEPDC5O75140 1603 aa18.68■□□□□ 0.58
NR4A1-221ENST00000565848 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
NR4A1-221ENST00000565848 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
NR4A1-221ENST00000565848 HRCP23327 699 aa18.66■□□□□ 0.58
NR4A1-221ENST00000565848 RNF17Q9BXT8 1623 aaKnown RBP18.66■□□□□ 0.58
NR4A1-221ENST00000565848 UNC13BO14795 1591 aa18.65■□□□□ 0.58
NR4A1-221ENST00000565848 MROH1Q8NDA8 1641 aa18.65■□□□□ 0.58
NR4A1-221ENST00000565848 FER1L4A9Z1Z3 1794 aa18.64■□□□□ 0.57
NR4A1-221ENST00000565848 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
NR4A1-221ENST00000565848 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
NR4A1-221ENST00000565848 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
NR4A1-221ENST00000565848 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
NR4A1-221ENST00000565848 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
NR4A1-221ENST00000565848 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
NR4A1-221ENST00000565848 PTPRTO14522 1441 aa18.58■□□□□ 0.57
NR4A1-221ENST00000565848 PREX1Q8TCU6 1659 aa18.58■□□□□ 0.57
NR4A1-221ENST00000565848 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
NR4A1-221ENST00000565848 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
NR4A1-221ENST00000565848 STRCQ7RTU9 1775 aa18.56■□□□□ 0.56
NR4A1-221ENST00000565848 FAM135AQ9P2D6 1515 aa18.55■□□□□ 0.56
NR4A1-221ENST00000565848 NCKAP5LQ9HCH0 1330 aa18.54■□□□□ 0.56
NR4A1-221ENST00000565848 LMTK2Q8IWU2 1503 aa18.53■□□□□ 0.56
NR4A1-221ENST00000565848 PZPP20742 1482 aa18.52■□□□□ 0.56
NR4A1-221ENST00000565848 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
NR4A1-221ENST00000565848 KIF3BO15066 747 aa18.51■□□□□ 0.55
NR4A1-221ENST00000565848 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
NR4A1-221ENST00000565848 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
NR4A1-221ENST00000565848 CEP152O94986 1710 aa18.48■□□□□ 0.55
NR4A1-221ENST00000565848 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
NR4A1-221ENST00000565848 ABCC3O15438 1527 aa18.48■□□□□ 0.55
NR4A1-221ENST00000565848 TET3O43151 1660 aa18.47■□□□□ 0.55
NR4A1-221ENST00000565848 NUP155O75694 1391 aa18.45■□□□□ 0.54
NR4A1-221ENST00000565848 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
NR4A1-221ENST00000565848 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
NR4A1-221ENST00000565848 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
NR4A1-221ENST00000565848 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
NR4A1-221ENST00000565848 SETD1BQ9UPS6 1966 aaKnown RBP18.44■□□□□ 0.54
NR4A1-221ENST00000565848 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
NR4A1-221ENST00000565848 E9PCH4 1651 aa18.42■□□□□ 0.54
NR4A1-221ENST00000565848 ARHGAP31Q2M1Z3 1444 aa18.41■□□□□ 0.54
NR4A1-221ENST00000565848 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
NR4A1-221ENST00000565848 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
NR4A1-221ENST00000565848 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
NR4A1-221ENST00000565848 KANK1Q14678 1352 aa18.41■□□□□ 0.54
NR4A1-221ENST00000565848 MSH5O43196 834 aa18.4■□□□□ 0.54
NR4A1-221ENST00000565848 HSPA1LP34931 641 aa18.4■□□□□ 0.54
NR4A1-221ENST00000565848 GGT6Q6P531 493 aa18.4■□□□□ 0.54
NR4A1-221ENST00000565848 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
NR4A1-221ENST00000565848 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.53
NR4A1-221ENST00000565848 C3P01024 1663 aa18.38■□□□□ 0.53
NR4A1-221ENST00000565848 PKD2Q13563 968 aa18.38■□□□□ 0.53
NR4A1-221ENST00000565848 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
NR4A1-221ENST00000565848 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
NR4A1-221ENST00000565848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
NR4A1-221ENST00000565848 NPATQ14207 1427 aa18.36■□□□□ 0.53
NR4A1-221ENST00000565848 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
NR4A1-221ENST00000565848 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
NR4A1-221ENST00000565848 PLA2R1Q13018 1463 aa18.33■□□□□ 0.53
NR4A1-221ENST00000565848 SPHKAPQ2M3C7 1700 aa18.33■□□□□ 0.52
NR4A1-221ENST00000565848 TOM1O60784 492 aa18.33■□□□□ 0.52
NR4A1-221ENST00000565848 NOS1P29475 1434 aa18.32■□□□□ 0.52
NR4A1-221ENST00000565848 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
NR4A1-221ENST00000565848 TRPM2O94759 1503 aa18.3■□□□□ 0.52
NR4A1-221ENST00000565848 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
NR4A1-221ENST00000565848 SYNMO15061 1565 aa18.29■□□□□ 0.52
NR4A1-221ENST00000565848 PIK3C2BO00750 1634 aa18.28■□□□□ 0.52
NR4A1-221ENST00000565848 ERVK-7P63135 1459 aa18.27■□□□□ 0.52
NR4A1-221ENST00000565848 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
NR4A1-221ENST00000565848 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
NR4A1-221ENST00000565848 CFAP65Q6ZU64 1925 aaKnown RBP18.22■□□□□ 0.51
NR4A1-221ENST00000565848 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
NR4A1-221ENST00000565848 MED1Q15648 1581 aaPredicted RBP18.2■□□□□ 0.5
NR4A1-221ENST00000565848 UGGT1Q9NYU2 1555 aa18.19■□□□□ 0.5
NR4A1-221ENST00000565848 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
NR4A1-221ENST00000565848 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
NR4A1-221ENST00000565848 CCER1Q8TC90 406 aaPredicted RBP18.17■□□□□ 0.5
NR4A1-221ENST00000565848 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
NR4A1-221ENST00000565848 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
NR4A1-221ENST00000565848 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
NR4A1-221ENST00000565848 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms