RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
CNOT1-208ENST00000565697 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
CNOT1-208ENST00000565697 ARHGEF5Q12774 1597 aa15.41■□□□□ 0.06
CNOT1-208ENST00000565697 A2MP01023 1474 aa15.41■□□□□ 0.06
CNOT1-208ENST00000565697 ADGBQ8N7X0 1667 aa15.4■□□□□ 0.06
CNOT1-208ENST00000565697 CNTLNQ9NXG0 1405 aa15.37■□□□□ 0.05
CNOT1-208ENST00000565697 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
CNOT1-208ENST00000565697 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
CNOT1-208ENST00000565697 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.05
CNOT1-208ENST00000565697 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
CNOT1-208ENST00000565697 GGT6Q6P531 493 aa15.33■□□□□ 0.04
CNOT1-208ENST00000565697 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
CNOT1-208ENST00000565697 CEBPAP49715 358 aaPredicted RBP15.32■□□□□ 0.04
CNOT1-208ENST00000565697 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
CNOT1-208ENST00000565697 TCOF1Q13428 1488 aaKnown RBP15.31■□□□□ 0.04
CNOT1-208ENST00000565697 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
CNOT1-208ENST00000565697 KIF3BO15066 747 aa15.3■□□□□ 0.04
CNOT1-208ENST00000565697 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
CNOT1-208ENST00000565697 MROH2AA6NES4 1674 aa15.29■□□□□ 0.04
CNOT1-208ENST00000565697 SHANK2Q9UPX8 1470 aa15.28■□□□□ 0.04
CNOT1-208ENST00000565697 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
CNOT1-208ENST00000565697 C3P01024 1663 aa15.28■□□□□ 0.04
CNOT1-208ENST00000565697 ABCC5O15440 1437 aa15.27■□□□□ 0.04
CNOT1-208ENST00000565697 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.03
CNOT1-208ENST00000565697 DAPK1P53355 1430 aa15.26■□□□□ 0.03
CNOT1-208ENST00000565697 UHRF1BP1Q6BDS2 1440 aa15.26■□□□□ 0.03
CNOT1-208ENST00000565697 DNMT1P26358 1616 aaKnown RBP15.26■□□□□ 0.03
CNOT1-208ENST00000565697 FAM135AQ9P2D6 1515 aa15.26■□□□□ 0.03
CNOT1-208ENST00000565697 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
CNOT1-208ENST00000565697 CROCC2H7BZ55 1655 aa15.25■□□□□ 0.03
CNOT1-208ENST00000565697 NPATQ14207 1427 aa15.25■□□□□ 0.03
CNOT1-208ENST00000565697 DUOX2Q9NRD8 1548 aa15.24■□□□□ 0.03
CNOT1-208ENST00000565697 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
CNOT1-208ENST00000565697 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
CNOT1-208ENST00000565697 EIF2AK4Q9P2K8 1649 aaKnown RBP15.23■□□□□ 0.03
CNOT1-208ENST00000565697 ANKRD30AQ9BXX3 1397 aa15.23■□□□□ 0.03
CNOT1-208ENST00000565697 KIF15Q9NS87 1388 aa15.23■□□□□ 0.03
CNOT1-208ENST00000565697 KCNA4P22459 653 aa15.22■□□□□ 0.03
CNOT1-208ENST00000565697 HSPA2P54652 639 aa15.22■□□□□ 0.03
CNOT1-208ENST00000565697 POLA2Q14181 598 aa15.22■□□□□ 0.03
CNOT1-208ENST00000565697 KDM5DQ9BY66 1539 aa15.22■□□□□ 0.03
CNOT1-208ENST00000565697 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
CNOT1-208ENST00000565697 ERBINQ96RT1 1412 aa15.2■□□□□ 0.02
CNOT1-208ENST00000565697 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
CNOT1-208ENST00000565697 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
CNOT1-208ENST00000565697 PTPRKQ15262 1439 aa15.18■□□□□ 0.02
CNOT1-208ENST00000565697 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
CNOT1-208ENST00000565697 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
CNOT1-208ENST00000565697 ADGRL2O95490 1459 aa15.16■□□□□ 0.02
CNOT1-208ENST00000565697 PPARGC1BQ86YN6 1023 aaKnown RBP15.16■□□□□ 0.02
CNOT1-208ENST00000565697 PZPP20742 1482 aa15.15■□□□□ 0.02
CNOT1-208ENST00000565697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNOT1-208ENST00000565697 KANK1Q14678 1352 aa15.13■□□□□ 0.01
CNOT1-208ENST00000565697 ABCC3O15438 1527 aa15.13■□□□□ 0.01
CNOT1-208ENST00000565697 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
CNOT1-208ENST00000565697 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
CNOT1-208ENST00000565697 TNRQ92752 1358 aa15.11■□□□□ 0.01
CNOT1-208ENST00000565697 MROH1Q8NDA8 1641 aa15.11■□□□□ 0.01
CNOT1-208ENST00000565697 ZNF142P52746 1687 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-208ENST00000565697 FBXO31Q5XUX0 539 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-208ENST00000565697 CEP170BQ9Y4F5 1589 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-208ENST00000565697 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
CNOT1-208ENST00000565697 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
CNOT1-208ENST00000565697 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
CNOT1-208ENST00000565697 DEPDC5O75140 1603 aa15.09■□□□□ 0.01
CNOT1-208ENST00000565697 AKT1S1Q96B36 256 aa15.08■□□□□ 0
CNOT1-208ENST00000565697 CEP152O94986 1710 aa15.08■□□□□ 0
CNOT1-208ENST00000565697 NLRP1Q9C000 1473 aa15.08■□□□□ 0
CNOT1-208ENST00000565697 CAMSAP1Q5T5Y3 1602 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 STRCQ7RTU9 1775 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 ITGAEP38570 1179 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 PKD2Q13563 968 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
CNOT1-208ENST00000565697 PLA2R1Q13018 1463 aa15.07■□□□□ 0
CNOT1-208ENST00000565697 PTPRTO14522 1441 aa15.06■□□□□ 0
CNOT1-208ENST00000565697 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
CNOT1-208ENST00000565697 LMTK2Q8IWU2 1503 aa15.04■□□□□ -0
CNOT1-208ENST00000565697 ERVK-7P63135 1459 aa15.04■□□□□ -0
CNOT1-208ENST00000565697 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
CNOT1-208ENST00000565697 VWDEQ8N2E2 1590 aa15.03■□□□□ -0
CNOT1-208ENST00000565697 UGGT1Q9NYU2 1555 aa15.02□□□□□ -0.01
CNOT1-208ENST00000565697 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
CNOT1-208ENST00000565697 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
CNOT1-208ENST00000565697 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
CNOT1-208ENST00000565697 ANKLE2Q86XL3 938 aa14.99□□□□□ -0.01
CNOT1-208ENST00000565697 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
CNOT1-208ENST00000565697 UNC13BO14795 1591 aa14.98□□□□□ -0.01
CNOT1-208ENST00000565697 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
CNOT1-208ENST00000565697 RPRD2Q5VT52 1461 aaKnown RBP14.97□□□□□ -0.01
CNOT1-208ENST00000565697 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
CNOT1-208ENST00000565697 TET3O43151 1660 aa14.96□□□□□ -0.01
CNOT1-208ENST00000565697 ILDR1Q86SU0 546 aaPredicted RBP14.95□□□□□ -0.02
CNOT1-208ENST00000565697 FBXO41Q8TF61 875 aa14.95□□□□□ -0.02
CNOT1-208ENST00000565697 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
CNOT1-208ENST00000565697 POLR1AO95602 1720 aaPredicted RBP14.95□□□□□ -0.02
CNOT1-208ENST00000565697 HAX1O00165 279 aa14.94□□□□□ -0.02
CNOT1-208ENST00000565697 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
CNOT1-208ENST00000565697 NUP155O75694 1391 aa14.94□□□□□ -0.02
CNOT1-208ENST00000565697 GCC2Q8IWJ2 1684 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms