RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 EFCAB3Q8N7B9 438 aa14.24□□□□□ -0.13
CDH13-207ENST00000565636 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
CDH13-207ENST00000565636 ZCCHC11Q5TAX3 1644 aaKnown RBP14.23□□□□□ -0.13
CDH13-207ENST00000565636 TMEM121BQ9BXQ6 578 aaPredicted RBP14.23□□□□□ -0.13
CDH13-207ENST00000565636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
CDH13-207ENST00000565636 SOX12O15370 315 aa14.21□□□□□ -0.13
CDH13-207ENST00000565636 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
CDH13-207ENST00000565636 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
CDH13-207ENST00000565636 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
CDH13-207ENST00000565636 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
CDH13-207ENST00000565636 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
CDH13-207ENST00000565636 MAGI3Q5TCQ9 1506 aa14.18□□□□□ -0.14
CDH13-207ENST00000565636 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
CDH13-207ENST00000565636 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
CDH13-207ENST00000565636 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
CDH13-207ENST00000565636 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
CDH13-207ENST00000565636 ABCA8O94911 1581 aa14.15□□□□□ -0.14
CDH13-207ENST00000565636 COL17A1Q9UMD9 1497 aaPredicted RBP14.14□□□□□ -0.15
CDH13-207ENST00000565636 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
CDH13-207ENST00000565636 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
CDH13-207ENST00000565636 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
CDH13-207ENST00000565636 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
CDH13-207ENST00000565636 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
CDH13-207ENST00000565636 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
CDH13-207ENST00000565636 NLRP6P59044 892 aa14.06□□□□□ -0.16
CDH13-207ENST00000565636 STK25O00506 426 aa14.05□□□□□ -0.16
CDH13-207ENST00000565636 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
CDH13-207ENST00000565636 PHF8Q9UPP1 1060 aa14.04□□□□□ -0.16
CDH13-207ENST00000565636 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
CDH13-207ENST00000565636 EEA1Q15075 1411 aa14.03□□□□□ -0.16
CDH13-207ENST00000565636 ATP10BO94823 1461 aa14.03□□□□□ -0.16
CDH13-207ENST00000565636 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
CDH13-207ENST00000565636 SAMD9Q5K651 1589 aa14.01□□□□□ -0.17
CDH13-207ENST00000565636 EMP3P54852 163 aa14.01□□□□□ -0.17
CDH13-207ENST00000565636 DOK7Q18PE1 504 aa14.01□□□□□ -0.17
CDH13-207ENST00000565636 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
CDH13-207ENST00000565636 MARVELD3Q96A59 401 aa14.01□□□□□ -0.17
CDH13-207ENST00000565636 NEO1Q92859 1461 aa14□□□□□ -0.17
CDH13-207ENST00000565636 PKD2Q13563 968 aa14□□□□□ -0.17
CDH13-207ENST00000565636 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
CDH13-207ENST00000565636 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
CDH13-207ENST00000565636 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
CDH13-207ENST00000565636 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.17
CDH13-207ENST00000565636 RGL2O15211 777 aa13.94□□□□□ -0.18
CDH13-207ENST00000565636 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
CDH13-207ENST00000565636 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
CDH13-207ENST00000565636 KIF21BO75037 1637 aa13.91□□□□□ -0.18
CDH13-207ENST00000565636 HOXB3P14651 431 aaPredicted RBP13.91□□□□□ -0.18
CDH13-207ENST00000565636 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
CDH13-207ENST00000565636 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
CDH13-207ENST00000565636 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
CDH13-207ENST00000565636 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
CDH13-207ENST00000565636 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
CDH13-207ENST00000565636 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
CDH13-207ENST00000565636 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
CDH13-207ENST00000565636 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
CDH13-207ENST00000565636 HOXB1P14653 301 aaPredicted RBP13.86□□□□□ -0.19
CDH13-207ENST00000565636 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
CDH13-207ENST00000565636 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
CDH13-207ENST00000565636 PTPRMP28827 1452 aa13.86□□□□□ -0.19
CDH13-207ENST00000565636 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
CDH13-207ENST00000565636 RICTORQ6R327 1708 aa13.84□□□□□ -0.19
CDH13-207ENST00000565636 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
CDH13-207ENST00000565636 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
CDH13-207ENST00000565636 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
CDH13-207ENST00000565636 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
CDH13-207ENST00000565636 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
CDH13-207ENST00000565636 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
CDH13-207ENST00000565636 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
CDH13-207ENST00000565636 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
CDH13-207ENST00000565636 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
CDH13-207ENST00000565636 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
CDH13-207ENST00000565636 ERBB3P21860 1342 aa13.81□□□□□ -0.2
CDH13-207ENST00000565636 FANCAO15360 1455 aa13.8□□□□□ -0.2
CDH13-207ENST00000565636 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
CDH13-207ENST00000565636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDH13-207ENST00000565636 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
CDH13-207ENST00000565636 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
CDH13-207ENST00000565636 PLCH2O75038 1416 aa13.78□□□□□ -0.2
CDH13-207ENST00000565636 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
CDH13-207ENST00000565636 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
CDH13-207ENST00000565636 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
CDH13-207ENST00000565636 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
CDH13-207ENST00000565636 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
CDH13-207ENST00000565636 HS6ST3Q8IZP7 471 aa13.73□□□□□ -0.21
CDH13-207ENST00000565636 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
CDH13-207ENST00000565636 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
CDH13-207ENST00000565636 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
CDH13-207ENST00000565636 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
CDH13-207ENST00000565636 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CDH13-207ENST00000565636 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
CDH13-207ENST00000565636 ATP10AO60312 1499 aa13.71□□□□□ -0.21
CDH13-207ENST00000565636 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
CDH13-207ENST00000565636 HECW1Q76N89 1606 aa13.71□□□□□ -0.22
CDH13-207ENST00000565636 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
CDH13-207ENST00000565636 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
CDH13-207ENST00000565636 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
CDH13-207ENST00000565636 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
CDH13-207ENST00000565636 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
CDH13-207ENST00000565636 CHGAP10645 457 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms