RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 CCDC141Q6ZP82 1450 aa34.34■■■■□ 3.09
RPUSD1-206ENST00000565503 UBAP1LF5GYI3 381 aa34.34■■■■□ 3.09
RPUSD1-206ENST00000565503 KDM5DQ9BY66 1539 aa34.31■■■■□ 3.08
RPUSD1-206ENST00000565503 PZPP20742 1482 aa34.29■■■■□ 3.08
RPUSD1-206ENST00000565503 CAMSAP2Q08AD1 1489 aa34.29■■■■□ 3.08
RPUSD1-206ENST00000565503 RSPH4AQ5TD94 716 aa34.29■■■■□ 3.08
RPUSD1-206ENST00000565503 TNRQ92752 1358 aa34.28■■■■□ 3.08
RPUSD1-206ENST00000565503 NCOA2Q15596 1464 aa34.27■■■■□ 3.08
RPUSD1-206ENST00000565503 KIF3BO15066 747 aa34.27■■■■□ 3.08
RPUSD1-206ENST00000565503 NEURL4Q96JN8 1562 aa34.24■■■■□ 3.07
RPUSD1-206ENST00000565503 ARHGEF5Q12774 1597 aa34.22■■■■□ 3.07
RPUSD1-206ENST00000565503 FBXO31Q5XUX0 539 aaPredicted RBP34.21■■■■□ 3.07
RPUSD1-206ENST00000565503 CPS1P31327 1500 aa34.2■■■■□ 3.07
RPUSD1-206ENST00000565503 WASHC2CQ9Y4E1 1318 aa34.19■■■■□ 3.06
RPUSD1-206ENST00000565503 NLRP1Q9C000 1473 aa34.16■■■■□ 3.06
RPUSD1-206ENST00000565503 SHANK2Q9UPX8 1470 aa34.14■■■■□ 3.06
RPUSD1-206ENST00000565503 MIA2Q96PC5 1412 aa34.14■■■■□ 3.06
RPUSD1-206ENST00000565503 DEPDC5O75140 1603 aa34.12■■■■□ 3.05
RPUSD1-206ENST00000565503 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 TSPY4P0CV99 314 aa34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 TSPY10P0CW01 314 aa34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 ANKLE2Q86XL3 938 aa34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 THEMISQ8N1K5 641 aaPredicted RBP34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 RNF17Q9BXT8 1623 aaKnown RBP34.11■■■■□ 3.05
RPUSD1-206ENST00000565503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.1■■■■□ 3.05
RPUSD1-206ENST00000565503 ZC3H13Q5T200 1668 aaKnown RBP34.09■■■■□ 3.05
RPUSD1-206ENST00000565503 MED14O60244 1454 aa34.07■■■■□ 3.05
RPUSD1-206ENST00000565503 VWDEQ8N2E2 1590 aa34.07■■■■□ 3.05
RPUSD1-206ENST00000565503 MAST1Q9Y2H9 1570 aa34.07■■■■□ 3.05
RPUSD1-206ENST00000565503 TOM1O60784 492 aa34.07■■■■□ 3.04
RPUSD1-206ENST00000565503 EIF2AK4Q9P2K8 1649 aaKnown RBP34.04■■■■□ 3.04
RPUSD1-206ENST00000565503 NPHP4O75161 1426 aaPredicted RBP34.04■■■■□ 3.04
RPUSD1-206ENST00000565503 LRRC9Q6ZRR7 1453 aa34.02■■■■□ 3.04
RPUSD1-206ENST00000565503 ABCC3O15438 1527 aa34.02■■■■□ 3.04
RPUSD1-206ENST00000565503 IQGAP1P46940 1657 aa34.02■■■■□ 3.04
RPUSD1-206ENST00000565503 SCAF1Q9H7N4 1312 aaKnown RBP34.01■■■■□ 3.03
RPUSD1-206ENST00000565503 HSPA1LP34931 641 aa33.99■■■■□ 3.03
RPUSD1-206ENST00000565503 PIP4K2BP78356 416 aa33.99■■■■□ 3.03
RPUSD1-206ENST00000565503 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
RPUSD1-206ENST00000565503 MED1Q15648 1581 aaPredicted RBP33.96■■■■□ 3.03
RPUSD1-206ENST00000565503 MROH1Q8NDA8 1641 aa33.93■■■■□ 3.02
RPUSD1-206ENST00000565503 ERVK-7P63135 1459 aa33.93■■■■□ 3.02
RPUSD1-206ENST00000565503 CFAP65Q6ZU64 1925 aaKnown RBP33.91■■■■□ 3.02
RPUSD1-206ENST00000565503 MAP3K1Q13233 1512 aa33.91■■■■□ 3.02
RPUSD1-206ENST00000565503 CEP152O94986 1710 aa33.9■■■■□ 3.02
RPUSD1-206ENST00000565503 ALKQ9UM73 1620 aa33.9■■■■□ 3.02
RPUSD1-206ENST00000565503 STRCP1A6NGW2 1772 aa33.9■■■■□ 3.02
RPUSD1-206ENST00000565503 SYNMO15061 1565 aa33.88■■■■□ 3.01
RPUSD1-206ENST00000565503 UBR1Q8IWV7 1749 aa33.87■■■■□ 3.01
RPUSD1-206ENST00000565503 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
RPUSD1-206ENST00000565503 DUOX2Q9NRD8 1548 aa33.86■■■■□ 3.01
RPUSD1-206ENST00000565503 LRRC7Q96NW7 1537 aa33.83■■■■□ 3.01
RPUSD1-206ENST00000565503 KANK4Q5T7N3 995 aaPredicted RBP33.79■■■■□ 3
RPUSD1-206ENST00000565503 PRDM15P57071 1507 aaPredicted RBP33.78■■■■□ 3
RPUSD1-206ENST00000565503 SCAF11Q99590 1463 aaKnown RBP33.77■■■■□ 3
RPUSD1-206ENST00000565503 CROCC2H7BZ55 1655 aa33.77■■■■□ 3
RPUSD1-206ENST00000565503 ARHGAP31Q2M1Z3 1444 aa33.76■■■□□ 2.99
RPUSD1-206ENST00000565503 SLIT1O75093 1534 aa33.75■■■□□ 2.99
RPUSD1-206ENST00000565503 ARHGAP23Q9P227 1491 aa33.74■■■□□ 2.99
RPUSD1-206ENST00000565503 ERBINQ96RT1 1412 aa33.73■■■□□ 2.99
RPUSD1-206ENST00000565503 KIF15Q9NS87 1388 aa33.72■■■□□ 2.99
RPUSD1-206ENST00000565503 LOC105371045A0A1W2PR82 267 aa33.66■■■□□ 2.98
RPUSD1-206ENST00000565503 ABCC5O15440 1437 aa33.66■■■□□ 2.98
RPUSD1-206ENST00000565503 PHF23Q9BUL5 403 aaPredicted RBP33.66■■■□□ 2.98
RPUSD1-206ENST00000565503 PTPN23Q9H3S7 1636 aa33.66■■■□□ 2.98
RPUSD1-206ENST00000565503 XIRP1Q702N8 1843 aaKnown RBP33.65■■■□□ 2.98
RPUSD1-206ENST00000565503 LTKP29376 864 aa33.65■■■□□ 2.98
RPUSD1-206ENST00000565503 TXNDC2Q86VQ3 553 aa33.65■■■□□ 2.98
RPUSD1-206ENST00000565503 PIK3C2BO00750 1634 aa33.64■■■□□ 2.98
RPUSD1-206ENST00000565503 KDM5AP29375 1690 aaKnown RBP33.63■■■□□ 2.97
RPUSD1-206ENST00000565503 EID1Q9Y6B2 187 aa33.61■■■□□ 2.97
RPUSD1-206ENST00000565503 RRP7BPQ9NSQ0 103 aa33.6■■■□□ 2.97
RPUSD1-206ENST00000565503 KANK1Q14678 1352 aa33.59■■■□□ 2.97
RPUSD1-206ENST00000565503 DAPK1P53355 1430 aa33.58■■■□□ 2.97
RPUSD1-206ENST00000565503 TMEM2Q9UHN6 1383 aa33.57■■■□□ 2.96
RPUSD1-206ENST00000565503 LMTK2Q8IWU2 1503 aa33.55■■■□□ 2.96
RPUSD1-206ENST00000565503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.54■■■□□ 2.96
RPUSD1-206ENST00000565503 SENP3Q9H4L4 574 aaPredicted RBP33.53■■■□□ 2.96
RPUSD1-206ENST00000565503 EFCAB6Q5THR3 1501 aa33.53■■■□□ 2.96
RPUSD1-206ENST00000565503 FGD6Q6ZV73 1430 aa33.51■■■□□ 2.95
RPUSD1-206ENST00000565503 STAG3Q9UJ98 1225 aa33.5■■■□□ 2.95
RPUSD1-206ENST00000565503 ANKRD30AQ9BXX3 1397 aa33.49■■■□□ 2.95
RPUSD1-206ENST00000565503 APLP2Q06481 763 aa33.49■■■□□ 2.95
RPUSD1-206ENST00000565503 FAM135BQ49AJ0 1406 aa33.45■■■□□ 2.95
RPUSD1-206ENST00000565503 IDI1Q13907 227 aa33.44■■■□□ 2.94
RPUSD1-206ENST00000565503 TET3O43151 1660 aa33.44■■■□□ 2.94
RPUSD1-206ENST00000565503 NOS1P29475 1434 aa33.42■■■□□ 2.94
RPUSD1-206ENST00000565503 KCNA6P17658 529 aa33.41■■■□□ 2.94
RPUSD1-206ENST00000565503 TMEM94Q12767 1356 aa33.41■■■□□ 2.94
RPUSD1-206ENST00000565503 ADGRB3O60242 1522 aa33.41■■■□□ 2.94
RPUSD1-206ENST00000565503 CHIC2Q9UKJ5 165 aa33.39■■■□□ 2.94
RPUSD1-206ENST00000565503 NWD1Q149M9 1564 aa33.36■■■□□ 2.93
RPUSD1-206ENST00000565503 ADGRL2O95490 1459 aa33.36■■■□□ 2.93
RPUSD1-206ENST00000565503 NKTRP30414 1462 aaKnown RBP33.35■■■□□ 2.93
RPUSD1-206ENST00000565503 ROBO1Q9Y6N7 1651 aa33.35■■■□□ 2.93
RPUSD1-206ENST00000565503 SLC52A1Q9NWF4 448 aa33.34■■■□□ 2.93
RPUSD1-206ENST00000565503 RGS17Q9UGC6 210 aaPredicted RBP33.34■■■□□ 2.93
RPUSD1-206ENST00000565503 RPRD2Q5VT52 1461 aaKnown RBP33.32■■■□□ 2.92
RPUSD1-206ENST00000565503 SLC26A8Q96RN1 970 aa33.32■■■□□ 2.92
RPUSD1-206ENST00000565503 PROSER2Q86WR7 435 aaPredicted RBP33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms