RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 DNMT1P26358 1616 aaKnown RBP34.49■■■■□ 3.11
CDH11-211ENST00000565210 DUOX2Q9NRD8 1548 aa34.49■■■■□ 3.11
CDH11-211ENST00000565210 KIF15Q9NS87 1388 aa34.49■■■■□ 3.11
CDH11-211ENST00000565210 CLTCQ00610 1675 aaKnown RBP34.48■■■■□ 3.11
CDH11-211ENST00000565210 CHIC2Q9UKJ5 165 aa34.46■■■■□ 3.11
CDH11-211ENST00000565210 CROCC2H7BZ55 1655 aa34.43■■■■□ 3.1
CDH11-211ENST00000565210 KDM5DQ9BY66 1539 aa34.42■■■■□ 3.1
CDH11-211ENST00000565210 PPARGC1BQ86YN6 1023 aaKnown RBP34.42■■■■□ 3.1
CDH11-211ENST00000565210 EIF2AK4Q9P2K8 1649 aaKnown RBP34.41■■■■□ 3.1
CDH11-211ENST00000565210 ERBINQ96RT1 1412 aa34.4■■■■□ 3.1
CDH11-211ENST00000565210 PTPRKQ15262 1439 aa34.39■■■■□ 3.1
CDH11-211ENST00000565210 DMRT2Q9Y5R5 561 aa34.37■■■■□ 3.09
CDH11-211ENST00000565210 NCOA1Q15788 1441 aa34.36■■■■□ 3.09
CDH11-211ENST00000565210 RNF17Q9BXT8 1623 aaKnown RBP34.33■■■■□ 3.09
CDH11-211ENST00000565210 ADGRL2O95490 1459 aa34.3■■■■□ 3.08
CDH11-211ENST00000565210 PZPP20742 1482 aa34.3■■■■□ 3.08
CDH11-211ENST00000565210 KANK1Q14678 1352 aa34.29■■■■□ 3.08
CDH11-211ENST00000565210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.29■■■■□ 3.08
CDH11-211ENST00000565210 FBXO31Q5XUX0 539 aaPredicted RBP34.27■■■■□ 3.08
CDH11-211ENST00000565210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.27■■■■□ 3.08
CDH11-211ENST00000565210 TNRQ92752 1358 aa34.26■■■■□ 3.08
CDH11-211ENST00000565210 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
CDH11-211ENST00000565210 ABCC3O15438 1527 aa34.24■■■■□ 3.07
CDH11-211ENST00000565210 ITGAEP38570 1179 aa34.19■■■■□ 3.06
CDH11-211ENST00000565210 ANKRD50Q9ULJ7 1429 aa34.19■■■■□ 3.06
CDH11-211ENST00000565210 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
CDH11-211ENST00000565210 PRDM15P57071 1507 aaPredicted RBP34.17■■■■□ 3.06
CDH11-211ENST00000565210 MROH1Q8NDA8 1641 aa34.17■■■■□ 3.06
CDH11-211ENST00000565210 MYO3AQ8NEV4 1616 aa34.17■■■■□ 3.06
CDH11-211ENST00000565210 A2ML1A8K2U0 1454 aa34.16■■■■□ 3.06
CDH11-211ENST00000565210 CEP170BQ9Y4F5 1589 aaPredicted RBP34.15■■■■□ 3.06
CDH11-211ENST00000565210 PKD2Q13563 968 aa34.14■■■■□ 3.06
CDH11-211ENST00000565210 CAMSAP1Q5T5Y3 1602 aa34.12■■■■□ 3.05
CDH11-211ENST00000565210 NLRP1Q9C000 1473 aa34.12■■■■□ 3.05
CDH11-211ENST00000565210 ZNF142P52746 1687 aaPredicted RBP34.12■■■■□ 3.05
CDH11-211ENST00000565210 PTPRTO14522 1441 aa34.12■■■■□ 3.05
CDH11-211ENST00000565210 ARHGAP31Q2M1Z3 1444 aa34.12■■■■□ 3.05
CDH11-211ENST00000565210 THEMISQ8N1K5 641 aaPredicted RBP34.11■■■■□ 3.05
CDH11-211ENST00000565210 DEPDC5O75140 1603 aa34.1■■■■□ 3.05
CDH11-211ENST00000565210 RRBP1Q9P2E9 1410 aaKnown RBP34.1■■■■□ 3.05
CDH11-211ENST00000565210 PLA2R1Q13018 1463 aa34.09■■■■□ 3.05
CDH11-211ENST00000565210 STRCQ7RTU9 1775 aa34.08■■■■□ 3.05
CDH11-211ENST00000565210 CEP152O94986 1710 aa34.07■■■■□ 3.04
CDH11-211ENST00000565210 ERVK-7P63135 1459 aa34.06■■■■□ 3.04
CDH11-211ENST00000565210 SPATA31D1Q6ZQQ2 1576 aa34.05■■■■□ 3.04
CDH11-211ENST00000565210 NCKAP5LQ9HCH0 1330 aa34.04■■■■□ 3.04
CDH11-211ENST00000565210 LMTK2Q8IWU2 1503 aa34.03■■■■□ 3.04
CDH11-211ENST00000565210 ANKLE2Q86XL3 938 aa33.99■■■■□ 3.03
CDH11-211ENST00000565210 VWDEQ8N2E2 1590 aa33.98■■■■□ 3.03
CDH11-211ENST00000565210 UGGT1Q9NYU2 1555 aa33.98■■■■□ 3.03
CDH11-211ENST00000565210 ILDR1Q86SU0 546 aaPredicted RBP33.94■■■■□ 3.02
CDH11-211ENST00000565210 CERKQ8TCT0 537 aa33.93■■■■□ 3.02
CDH11-211ENST00000565210 STAG3Q9UJ98 1225 aa33.92■■■■□ 3.02
CDH11-211ENST00000565210 FBXO41Q8TF61 875 aa33.91■■■■□ 3.02
CDH11-211ENST00000565210 CFAP65Q6ZU64 1925 aaKnown RBP33.9■■■■□ 3.02
CDH11-211ENST00000565210 RPRD2Q5VT52 1461 aaKnown RBP33.88■■■■□ 3.01
CDH11-211ENST00000565210 SLC52A1Q9NWF4 448 aa33.88■■■■□ 3.01
CDH11-211ENST00000565210 EFCAB6Q5THR3 1501 aa33.88■■■■□ 3.01
CDH11-211ENST00000565210 NUP155O75694 1391 aa33.86■■■■□ 3.01
CDH11-211ENST00000565210 UNC13BO14795 1591 aa33.85■■■■□ 3.01
CDH11-211ENST00000565210 IDI1Q13907 227 aa33.82■■■■□ 3
CDH11-211ENST00000565210 NOS1P29475 1434 aa33.81■■■■□ 3
CDH11-211ENST00000565210 EID1Q9Y6B2 187 aa33.8■■■■□ 3
CDH11-211ENST00000565210 TET3O43151 1660 aa33.8■■■■□ 3
CDH11-211ENST00000565210 TXNDC2Q86VQ3 553 aa33.75■■■□□ 2.99
CDH11-211ENST00000565210 NPHP4O75161 1426 aaPredicted RBP33.75■■■□□ 2.99
CDH11-211ENST00000565210 NAIPQ13075 1403 aa33.75■■■□□ 2.99
CDH11-211ENST00000565210 POLR1AO95602 1720 aaPredicted RBP33.75■■■□□ 2.99
CDH11-211ENST00000565210 MED14O60244 1454 aa33.74■■■□□ 2.99
CDH11-211ENST00000565210 IQGAP3Q86VI3 1631 aa33.73■■■□□ 2.99
CDH11-211ENST00000565210 UBR1Q8IWV7 1749 aa33.73■■■□□ 2.99
CDH11-211ENST00000565210 GCC2Q8IWJ2 1684 aa33.72■■■□□ 2.99
CDH11-211ENST00000565210 ZNF335Q9H4Z2 1342 aaPredicted RBP33.72■■■□□ 2.99
CDH11-211ENST00000565210 HFM1A2PYH4 1435 aa33.71■■■□□ 2.99
CDH11-211ENST00000565210 HDGFP51858 240 aaKnown RBP33.69■■■□□ 2.98
CDH11-211ENST00000565210 TMEM2Q9UHN6 1383 aa33.69■■■□□ 2.98
CDH11-211ENST00000565210 SYNMO15061 1565 aa33.68■■■□□ 2.98
CDH11-211ENST00000565210 NEURL4Q96JN8 1562 aa33.68■■■□□ 2.98
CDH11-211ENST00000565210 PIK3C2BO00750 1634 aa33.68■■■□□ 2.98
CDH11-211ENST00000565210 SLIT1O75093 1534 aa33.68■■■□□ 2.98
CDH11-211ENST00000565210 LTBP4Q8N2S1 1624 aa33.68■■■□□ 2.98
CDH11-211ENST00000565210 TRIM52Q96A61 297 aa33.67■■■□□ 2.98
CDH11-211ENST00000565210 SCAF11Q99590 1463 aaKnown RBP33.67■■■□□ 2.98
CDH11-211ENST00000565210 ARHGAP23Q9P227 1491 aa33.67■■■□□ 2.98
CDH11-211ENST00000565210 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
CDH11-211ENST00000565210 LTKP29376 864 aa33.64■■■□□ 2.98
CDH11-211ENST00000565210 IQSEC2Q5JU85 1478 aa33.63■■■□□ 2.97
CDH11-211ENST00000565210 CHGAP10645 457 aaKnown RBP33.61■■■□□ 2.97
CDH11-211ENST00000565210 E9PCH4 1651 aa33.6■■■□□ 2.97
CDH11-211ENST00000565210 ADGRB3O60242 1522 aa33.59■■■□□ 2.97
CDH11-211ENST00000565210 ACIN1Q9UKV3 1341 aaKnown RBP33.59■■■□□ 2.97
CDH11-211ENST00000565210 IQGAP1P46940 1657 aa33.58■■■□□ 2.97
CDH11-211ENST00000565210 CPS1P31327 1500 aa33.54■■■□□ 2.96
CDH11-211ENST00000565210 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.54■■■□□ 2.96
CDH11-211ENST00000565210 PPP1R15AO75807 674 aaPredicted RBP33.52■■■□□ 2.96
CDH11-211ENST00000565210 BCANQ96GW7 911 aa33.52■■■□□ 2.96
CDH11-211ENST00000565210 SLC4A1APQ9BWU0 796 aaKnown RBP33.52■■■□□ 2.96
CDH11-211ENST00000565210 RIMS2Q9UQ26 1411 aa33.45■■■□□ 2.95
CDH11-211ENST00000565210 TMEM131LA2VDJ0 1609 aa33.44■■■□□ 2.94
CDH11-211ENST00000565210 UBAP1LF5GYI3 381 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms