RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 TSR1Q2NL82 804 aaKnown RBP10.13□□□□□ -0.79
CDH1-207ENST00000564745 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
CDH1-207ENST00000564745 EPAS1Q99814 870 aa10.13□□□□□ -0.79
CDH1-207ENST00000564745 NUDT7P0C024 238 aa10.12□□□□□ -0.79
CDH1-207ENST00000564745 KDM4CQ9H3R0 1056 aa10.12□□□□□ -0.79
CDH1-207ENST00000564745 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
CDH1-207ENST00000564745 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
CDH1-207ENST00000564745 FOSBP53539 338 aa10.09□□□□□ -0.79
CDH1-207ENST00000564745 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
CDH1-207ENST00000564745 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
CDH1-207ENST00000564745 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
CDH1-207ENST00000564745 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
CDH1-207ENST00000564745 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
CDH1-207ENST00000564745 AMHR2Q16671 573 aa10.05□□□□□ -0.8
CDH1-207ENST00000564745 PARP9Q8IXQ6 854 aa10.05□□□□□ -0.8
CDH1-207ENST00000564745 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CDH1-207ENST00000564745 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
CDH1-207ENST00000564745 ADAM33Q9BZ11 813 aa10.04□□□□□ -0.8
CDH1-207ENST00000564745 FAM117AQ9C073 453 aa10.04□□□□□ -0.8
CDH1-207ENST00000564745 SNPHO15079 494 aa10.03□□□□□ -0.8
CDH1-207ENST00000564745 C6orf132Q5T0Z8 1188 aa10.03□□□□□ -0.8
CDH1-207ENST00000564745 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
CDH1-207ENST00000564745 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
CDH1-207ENST00000564745 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
CDH1-207ENST00000564745 REPIN1Q9BWE0 567 aaKnown RBP10.02□□□□□ -0.81
CDH1-207ENST00000564745 LHX6Q9UPM6 363 aa10.02□□□□□ -0.81
CDH1-207ENST00000564745 RIMBP2O15034 1052 aa10.01□□□□□ -0.81
CDH1-207ENST00000564745 ZSWIM6Q9HCJ5 1215 aa10.01□□□□□ -0.81
CDH1-207ENST00000564745 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
CDH1-207ENST00000564745 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
CDH1-207ENST00000564745 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
CDH1-207ENST00000564745 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
CDH1-207ENST00000564745 ST18O60284 1047 aa9.98□□□□□ -0.81
CDH1-207ENST00000564745 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
CDH1-207ENST00000564745 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
CDH1-207ENST00000564745 MS4A1P11836 297 aa9.95□□□□□ -0.82
CDH1-207ENST00000564745 COL9A1P20849 921 aa9.95□□□□□ -0.82
CDH1-207ENST00000564745 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
CDH1-207ENST00000564745 MDM2Q00987 491 aaPredicted RBP9.94□□□□□ -0.82
CDH1-207ENST00000564745 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
CDH1-207ENST00000564745 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
CDH1-207ENST00000564745 FAM198AQ9UFP1 575 aa9.93□□□□□ -0.82
CDH1-207ENST00000564745 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
CDH1-207ENST00000564745 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
CDH1-207ENST00000564745 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
CDH1-207ENST00000564745 CERKQ8TCT0 537 aa9.92□□□□□ -0.82
CDH1-207ENST00000564745 PRSS12P56730 875 aa9.91□□□□□ -0.82
CDH1-207ENST00000564745 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
CDH1-207ENST00000564745 PXYLP1Q8TE99 480 aa9.91□□□□□ -0.82
CDH1-207ENST00000564745 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
CDH1-207ENST00000564745 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
CDH1-207ENST00000564745 C3orf80F5H4A9 247 aa9.9□□□□□ -0.82
CDH1-207ENST00000564745 C14orf37Q86TY3 774 aa9.9□□□□□ -0.82
CDH1-207ENST00000564745 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
CDH1-207ENST00000564745 CLCN1P35523 988 aa9.88□□□□□ -0.83
CDH1-207ENST00000564745 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
CDH1-207ENST00000564745 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
CDH1-207ENST00000564745 OATP04181 439 aa9.87□□□□□ -0.83
CDH1-207ENST00000564745 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
CDH1-207ENST00000564745 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
CDH1-207ENST00000564745 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
CDH1-207ENST00000564745 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
CDH1-207ENST00000564745 PTPREP23469 700 aa9.85□□□□□ -0.83
CDH1-207ENST00000564745 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
CDH1-207ENST00000564745 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
CDH1-207ENST00000564745 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
CDH1-207ENST00000564745 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
CDH1-207ENST00000564745 EYA1Q99502 592 aa9.82□□□□□ -0.84
CDH1-207ENST00000564745 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
CDH1-207ENST00000564745 RBM46Q8TBY0 533 aaKnown RBP9.81□□□□□ -0.84
CDH1-207ENST00000564745 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
CDH1-207ENST00000564745 BEGAINQ9BUH8 593 aa9.81□□□□□ -0.84
CDH1-207ENST00000564745 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
CDH1-207ENST00000564745 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
CDH1-207ENST00000564745 SMAPO00193 183 aa9.8□□□□□ -0.84
CDH1-207ENST00000564745 PSEN2P49810 448 aa9.8□□□□□ -0.84
CDH1-207ENST00000564745 EMP3P54852 163 aa9.8□□□□□ -0.84
CDH1-207ENST00000564745 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
CDH1-207ENST00000564745 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
CDH1-207ENST00000564745 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
CDH1-207ENST00000564745 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
CDH1-207ENST00000564745 TATDN2Q93075 761 aa9.77□□□□□ -0.85
CDH1-207ENST00000564745 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CDH1-207ENST00000564745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.76□□□□□ -0.85
CDH1-207ENST00000564745 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
CDH1-207ENST00000564745 ERBB3P21860 1342 aa9.76□□□□□ -0.85
CDH1-207ENST00000564745 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
CDH1-207ENST00000564745 SH3D19Q5HYK7 790 aa9.75□□□□□ -0.85
CDH1-207ENST00000564745 ZBED2Q9BTP6 218 aa9.75□□□□□ -0.85
CDH1-207ENST00000564745 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
CDH1-207ENST00000564745 PACS2Q86VP3 889 aa9.74□□□□□ -0.85
CDH1-207ENST00000564745 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
CDH1-207ENST00000564745 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
CDH1-207ENST00000564745 POLR3EQ9NVU0 708 aa9.74□□□□□ -0.85
CDH1-207ENST00000564745 KIAA1468Q9P260 1216 aa9.74□□□□□ -0.85
CDH1-207ENST00000564745 DNAJB2P25686 324 aa9.72□□□□□ -0.85
CDH1-207ENST00000564745 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
CDH1-207ENST00000564745 MYSM1Q5VVJ2 828 aa9.72□□□□□ -0.85
CDH1-207ENST00000564745 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
CDH1-207ENST00000564745 TBC1D2Q9BYX2 928 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms