RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 A2ML1A8K2U0 1454 aa31.85■■■□□ 2.69
COTL1-204ENST00000564662 TCOF1Q13428 1488 aaKnown RBP31.85■■■□□ 2.69
COTL1-204ENST00000564662 POLR1AO95602 1720 aaPredicted RBP31.85■■■□□ 2.69
COTL1-204ENST00000564662 MAST1Q9Y2H9 1570 aa31.85■■■□□ 2.69
COTL1-204ENST00000564662 MAP3K1Q13233 1512 aa31.85■■■□□ 2.69
COTL1-204ENST00000564662 PZPP20742 1482 aa31.84■■■□□ 2.69
COTL1-204ENST00000564662 IQSEC2Q5JU85 1478 aa31.82■■■□□ 2.68
COTL1-204ENST00000564662 RNF17Q9BXT8 1623 aaKnown RBP31.82■■■□□ 2.68
COTL1-204ENST00000564662 MYOM3Q5VTT5 1437 aa31.78■■■□□ 2.68
COTL1-204ENST00000564662 TSPY4P0CV99 314 aa31.78■■■□□ 2.68
COTL1-204ENST00000564662 TSPY10P0CW01 314 aa31.78■■■□□ 2.68
COTL1-204ENST00000564662 KANK4Q5T7N3 995 aaPredicted RBP31.78■■■□□ 2.68
COTL1-204ENST00000564662 ZC3H13Q5T200 1668 aaKnown RBP31.78■■■□□ 2.68
COTL1-204ENST00000564662 TNRQ92752 1358 aa31.78■■■□□ 2.68
COTL1-204ENST00000564662 EIF2AK4Q9P2K8 1649 aaKnown RBP31.78■■■□□ 2.68
COTL1-204ENST00000564662 PKD2Q13563 968 aa31.77■■■□□ 2.68
COTL1-204ENST00000564662 ZNF335Q9H4Z2 1342 aaPredicted RBP31.75■■■□□ 2.67
COTL1-204ENST00000564662 CROCC2H7BZ55 1655 aa31.75■■■□□ 2.67
COTL1-204ENST00000564662 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
COTL1-204ENST00000564662 FBXO31Q5XUX0 539 aaPredicted RBP31.74■■■□□ 2.67
COTL1-204ENST00000564662 MIA2Q96PC5 1412 aa31.73■■■□□ 2.67
COTL1-204ENST00000564662 CEP152O94986 1710 aa31.72■■■□□ 2.67
COTL1-204ENST00000564662 NEURL4Q96JN8 1562 aa31.72■■■□□ 2.67
COTL1-204ENST00000564662 ABCC3O15438 1527 aa31.7■■■□□ 2.66
COTL1-204ENST00000564662 MROH1Q8NDA8 1641 aa31.69■■■□□ 2.66
COTL1-204ENST00000564662 NLRP1Q9C000 1473 aa31.65■■■□□ 2.66
COTL1-204ENST00000564662 PTPN23Q9H3S7 1636 aa31.65■■■□□ 2.66
COTL1-204ENST00000564662 UGGT1Q9NYU2 1555 aa31.64■■■□□ 2.66
COTL1-204ENST00000564662 SPATA31D1Q6ZQQ2 1576 aa31.62■■■□□ 2.65
COTL1-204ENST00000564662 DUOX2Q9NRD8 1548 aa31.62■■■□□ 2.65
COTL1-204ENST00000564662 CFAP65Q6ZU64 1925 aaKnown RBP31.59■■■□□ 2.65
COTL1-204ENST00000564662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.59■■■□□ 2.65
COTL1-204ENST00000564662 SHANK2Q9UPX8 1470 aa31.59■■■□□ 2.65
COTL1-204ENST00000564662 DEPDC5O75140 1603 aa31.58■■■□□ 2.65
COTL1-204ENST00000564662 ERVK-7P63135 1459 aa31.57■■■□□ 2.64
COTL1-204ENST00000564662 DISP3Q9P2K9 1392 aa31.56■■■□□ 2.64
COTL1-204ENST00000564662 PRDM15P57071 1507 aaPredicted RBP31.55■■■□□ 2.64
COTL1-204ENST00000564662 IQGAP1P46940 1657 aa31.54■■■□□ 2.64
COTL1-204ENST00000564662 APLP2Q06481 763 aa31.54■■■□□ 2.64
COTL1-204ENST00000564662 KIF15Q9NS87 1388 aa31.53■■■□□ 2.64
COTL1-204ENST00000564662 UBAP1LF5GYI3 381 aa31.52■■■□□ 2.64
COTL1-204ENST00000564662 ABCC5O15440 1437 aa31.51■■■□□ 2.64
COTL1-204ENST00000564662 CPS1P31327 1500 aa31.51■■■□□ 2.63
COTL1-204ENST00000564662 UBR1Q8IWV7 1749 aa31.51■■■□□ 2.63
COTL1-204ENST00000564662 THEMISQ8N1K5 641 aaPredicted RBP31.5■■■□□ 2.63
COTL1-204ENST00000564662 DAPK1P53355 1430 aa31.49■■■□□ 2.63
COTL1-204ENST00000564662 FGD6Q6ZV73 1430 aa31.49■■■□□ 2.63
COTL1-204ENST00000564662 ERBINQ96RT1 1412 aa31.49■■■□□ 2.63
COTL1-204ENST00000564662 VWDEQ8N2E2 1590 aa31.49■■■□□ 2.63
COTL1-204ENST00000564662 ANKLE2Q86XL3 938 aa31.49■■■□□ 2.63
COTL1-204ENST00000564662 NPHP4O75161 1426 aaPredicted RBP31.48■■■□□ 2.63
COTL1-204ENST00000564662 MED14O60244 1454 aa31.46■■■□□ 2.63
COTL1-204ENST00000564662 RRP7BPQ9NSQ0 103 aa31.42■■■□□ 2.62
COTL1-204ENST00000564662 STRCP1A6NGW2 1772 aa31.4■■■□□ 2.62
COTL1-204ENST00000564662 ARHGAP31Q2M1Z3 1444 aa31.37■■■□□ 2.61
COTL1-204ENST00000564662 PIK3C2BO00750 1634 aa31.36■■■□□ 2.61
COTL1-204ENST00000564662 ILDR2Q71H61 639 aa31.35■■■□□ 2.61
COTL1-204ENST00000564662 SYNMO15061 1565 aa31.34■■■□□ 2.61
COTL1-204ENST00000564662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.34■■■□□ 2.61
COTL1-204ENST00000564662 SCAF1Q9H7N4 1312 aaKnown RBP31.33■■■□□ 2.61
COTL1-204ENST00000564662 ANKRD30AQ9BXX3 1397 aa31.32■■■□□ 2.6
COTL1-204ENST00000564662 CHIC2Q9UKJ5 165 aa31.32■■■□□ 2.6
COTL1-204ENST00000564662 SCAF11Q99590 1463 aaKnown RBP31.32■■■□□ 2.6
COTL1-204ENST00000564662 KANK1Q14678 1352 aa31.31■■■□□ 2.6
COTL1-204ENST00000564662 SLIT1O75093 1534 aa31.29■■■□□ 2.6
COTL1-204ENST00000564662 PIP4K2BP78356 416 aa31.29■■■□□ 2.6
COTL1-204ENST00000564662 ARHGAP23Q9P227 1491 aa31.28■■■□□ 2.6
COTL1-204ENST00000564662 LMTK2Q8IWU2 1503 aa31.28■■■□□ 2.6
COTL1-204ENST00000564662 ALKQ9UM73 1620 aa31.26■■■□□ 2.59
COTL1-204ENST00000564662 ADGRL2O95490 1459 aa31.26■■■□□ 2.59
COTL1-204ENST00000564662 TOM1O60784 492 aa31.25■■■□□ 2.59
COTL1-204ENST00000564662 KDM5AP29375 1690 aaKnown RBP31.25■■■□□ 2.59
COTL1-204ENST00000564662 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
COTL1-204ENST00000564662 LRRC7Q96NW7 1537 aa31.24■■■□□ 2.59
COTL1-204ENST00000564662 HSPA1LP34931 641 aa31.19■■■□□ 2.58
COTL1-204ENST00000564662 FAM50AQ14320 339 aaKnown RBP31.19■■■□□ 2.58
COTL1-204ENST00000564662 XIRP1Q702N8 1843 aaKnown RBP31.17■■■□□ 2.58
COTL1-204ENST00000564662 LTKP29376 864 aa31.17■■■□□ 2.58
COTL1-204ENST00000564662 MED1Q15648 1581 aaPredicted RBP31.17■■■□□ 2.58
COTL1-204ENST00000564662 TXNDC2Q86VQ3 553 aa31.16■■■□□ 2.58
COTL1-204ENST00000564662 ADGRB3O60242 1522 aa31.14■■■□□ 2.58
COTL1-204ENST00000564662 STAG3Q9UJ98 1225 aa31.14■■■□□ 2.58
COTL1-204ENST00000564662 SOCS7O14512 581 aa31.13■■■□□ 2.57
COTL1-204ENST00000564662 TMEM2Q9UHN6 1383 aa31.13■■■□□ 2.57
COTL1-204ENST00000564662 EID1Q9Y6B2 187 aa31.12■■■□□ 2.57
COTL1-204ENST00000564662 TET3O43151 1660 aa31.12■■■□□ 2.57
COTL1-204ENST00000564662 NOS1P29475 1434 aa31.11■■■□□ 2.57
COTL1-204ENST00000564662 ANKRD50Q9ULJ7 1429 aa31.11■■■□□ 2.57
COTL1-204ENST00000564662 MYO5BQ9ULV0 1848 aa31.1■■■□□ 2.57
COTL1-204ENST00000564662 GCC2Q8IWJ2 1684 aa31.1■■■□□ 2.57
COTL1-204ENST00000564662 UNC13BO14795 1591 aa31.09■■■□□ 2.57
COTL1-204ENST00000564662 IDI1Q13907 227 aa31.07■■■□□ 2.56
COTL1-204ENST00000564662 RPRD2Q5VT52 1461 aaKnown RBP31.05■■■□□ 2.56
COTL1-204ENST00000564662 SENP3Q9H4L4 574 aaPredicted RBP31.02■■■□□ 2.56
COTL1-204ENST00000564662 E9PCH4 1651 aa30.99■■■□□ 2.55
COTL1-204ENST00000564662 NWD1Q149M9 1564 aa30.96■■■□□ 2.55
COTL1-204ENST00000564662 IQGAP3Q86VI3 1631 aa30.95■■■□□ 2.55
COTL1-204ENST00000564662 TMEM131LA2VDJ0 1609 aa30.95■■■□□ 2.54
COTL1-204ENST00000564662 SLC52A1Q9NWF4 448 aa30.93■■■□□ 2.54
COTL1-204ENST00000564662 SLC26A8Q96RN1 970 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms