RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ARHGEF5Q12774 1597 aa22.58■■□□□ 1.2
CDR2-204ENST00000564542 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
CDR2-204ENST00000564542 SPATA31D1Q6ZQQ2 1576 aa22.57■■□□□ 1.2
CDR2-204ENST00000564542 PZPP20742 1482 aa22.56■■□□□ 1.2
CDR2-204ENST00000564542 POLR1AO95602 1720 aaPredicted RBP22.54■■□□□ 1.2
CDR2-204ENST00000564542 KIF3BO15066 747 aa22.54■■□□□ 1.2
CDR2-204ENST00000564542 TNRQ92752 1358 aa22.52■■□□□ 1.2
CDR2-204ENST00000564542 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
CDR2-204ENST00000564542 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
CDR2-204ENST00000564542 VPS8Q8N3P4 1428 aa22.49■■□□□ 1.19
CDR2-204ENST00000564542 MAST1Q9Y2H9 1570 aa22.48■■□□□ 1.19
CDR2-204ENST00000564542 FBXO31Q5XUX0 539 aaPredicted RBP22.48■■□□□ 1.19
CDR2-204ENST00000564542 RNF17Q9BXT8 1623 aaKnown RBP22.48■■□□□ 1.19
CDR2-204ENST00000564542 WASHC2CQ9Y4E1 1318 aa22.48■■□□□ 1.19
CDR2-204ENST00000564542 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
CDR2-204ENST00000564542 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
CDR2-204ENST00000564542 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
CDR2-204ENST00000564542 TSPY10P0CW01 314 aa22.46■■□□□ 1.19
CDR2-204ENST00000564542 NLRP1Q9C000 1473 aa22.46■■□□□ 1.19
CDR2-204ENST00000564542 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
CDR2-204ENST00000564542 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
CDR2-204ENST00000564542 CPS1P31327 1500 aa22.43■■□□□ 1.18
CDR2-204ENST00000564542 MAP3K1Q13233 1512 aa22.43■■□□□ 1.18
CDR2-204ENST00000564542 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
CDR2-204ENST00000564542 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
CDR2-204ENST00000564542 ABCC3O15438 1527 aa22.41■■□□□ 1.18
CDR2-204ENST00000564542 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
CDR2-204ENST00000564542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.18
CDR2-204ENST00000564542 SOCS7O14512 581 aa22.39■■□□□ 1.17
CDR2-204ENST00000564542 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
CDR2-204ENST00000564542 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
CDR2-204ENST00000564542 MED14O60244 1454 aa22.38■■□□□ 1.17
CDR2-204ENST00000564542 MYOM3Q5VTT5 1437 aa22.38■■□□□ 1.17
CDR2-204ENST00000564542 MROH1Q8NDA8 1641 aa22.38■■□□□ 1.17
CDR2-204ENST00000564542 ANKLE2Q86XL3 938 aa22.37■■□□□ 1.17
CDR2-204ENST00000564542 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
CDR2-204ENST00000564542 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
CDR2-204ENST00000564542 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
CDR2-204ENST00000564542 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
CDR2-204ENST00000564542 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
CDR2-204ENST00000564542 CEP152O94986 1710 aa22.33■■□□□ 1.17
CDR2-204ENST00000564542 DUOX2Q9NRD8 1548 aa22.32■■□□□ 1.16
CDR2-204ENST00000564542 CROCC2H7BZ55 1655 aa22.31■■□□□ 1.16
CDR2-204ENST00000564542 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
CDR2-204ENST00000564542 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
CDR2-204ENST00000564542 TOM1O60784 492 aa22.28■■□□□ 1.16
CDR2-204ENST00000564542 UBR1Q8IWV7 1749 aa22.28■■□□□ 1.16
CDR2-204ENST00000564542 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
CDR2-204ENST00000564542 ERBINQ96RT1 1412 aa22.25■■□□□ 1.15
CDR2-204ENST00000564542 SYNMO15061 1565 aa22.25■■□□□ 1.15
CDR2-204ENST00000564542 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
CDR2-204ENST00000564542 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
CDR2-204ENST00000564542 PIP4K2BP78356 416 aa22.24■■□□□ 1.15
CDR2-204ENST00000564542 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
CDR2-204ENST00000564542 STRCP1A6NGW2 1772 aa22.23■■□□□ 1.15
CDR2-204ENST00000564542 HSPA1LP34931 641 aa22.23■■□□□ 1.15
CDR2-204ENST00000564542 ABCC5O15440 1437 aa22.23■■□□□ 1.15
CDR2-204ENST00000564542 ARHGAP31Q2M1Z3 1444 aa22.23■■□□□ 1.15
CDR2-204ENST00000564542 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
CDR2-204ENST00000564542 SCAF11Q99590 1463 aaKnown RBP22.21■■□□□ 1.15
CDR2-204ENST00000564542 CFAP65Q6ZU64 1925 aaKnown RBP22.2■■□□□ 1.14
CDR2-204ENST00000564542 SLIT1O75093 1534 aa22.2■■□□□ 1.14
CDR2-204ENST00000564542 LRRC7Q96NW7 1537 aa22.2■■□□□ 1.14
CDR2-204ENST00000564542 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
CDR2-204ENST00000564542 DAPK1P53355 1430 aa22.18■■□□□ 1.14
CDR2-204ENST00000564542 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
CDR2-204ENST00000564542 RRP7BPQ9NSQ0 103 aa22.15■■□□□ 1.14
CDR2-204ENST00000564542 PIK3C2BO00750 1634 aa22.14■■□□□ 1.14
CDR2-204ENST00000564542 APLP2Q06481 763 aa22.14■■□□□ 1.13
CDR2-204ENST00000564542 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
CDR2-204ENST00000564542 KANK1Q14678 1352 aa22.12■■□□□ 1.13
CDR2-204ENST00000564542 LMTK2Q8IWU2 1503 aa22.12■■□□□ 1.13
CDR2-204ENST00000564542 LTKP29376 864 aa22.11■■□□□ 1.13
CDR2-204ENST00000564542 ANKRD30AQ9BXX3 1397 aa22.1■■□□□ 1.13
CDR2-204ENST00000564542 TXNDC2Q86VQ3 553 aa22.09■■□□□ 1.13
CDR2-204ENST00000564542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.134e-8■■■□□ 17
CDR2-204ENST00000564542 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
CDR2-204ENST00000564542 TMEM2Q9UHN6 1383 aa22.08■■□□□ 1.12
CDR2-204ENST00000564542 EFCAB6Q5THR3 1501 aa22.07■■□□□ 1.12
CDR2-204ENST00000564542 XIRP1Q702N8 1843 aaKnown RBP22.06■■□□□ 1.12
CDR2-204ENST00000564542 ADGRL2O95490 1459 aa22.04■■□□□ 1.12
CDR2-204ENST00000564542 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.12
CDR2-204ENST00000564542 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
CDR2-204ENST00000564542 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
CDR2-204ENST00000564542 NOS1P29475 1434 aa22.01■■□□□ 1.11
CDR2-204ENST00000564542 IDI1Q13907 227 aa21.99■■□□□ 1.11
CDR2-204ENST00000564542 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
CDR2-204ENST00000564542 TET3O43151 1660 aa21.98■■□□□ 1.11
CDR2-204ENST00000564542 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
CDR2-204ENST00000564542 RPRD2Q5VT52 1461 aaKnown RBP21.96■■□□□ 1.11
CDR2-204ENST00000564542 NWD1Q149M9 1564 aa21.95■■□□□ 1.1
CDR2-204ENST00000564542 ANKRD50Q9ULJ7 1429 aa21.94■■□□□ 1.1
CDR2-204ENST00000564542 TMEM94Q12767 1356 aa21.93■■□□□ 1.1
CDR2-204ENST00000564542 SLC52A1Q9NWF4 448 aa21.93■■□□□ 1.1
CDR2-204ENST00000564542 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
CDR2-204ENST00000564542 FAM135BQ49AJ0 1406 aa21.92■■□□□ 1.1
CDR2-204ENST00000564542 KCNA6P17658 529 aa21.92■■□□□ 1.1
CDR2-204ENST00000564542 FAM50AQ14320 339 aaKnown RBP21.9■■□□□ 1.1
CDR2-204ENST00000564542 GCC2Q8IWJ2 1684 aa21.89■■□□□ 1.1
CDR2-204ENST00000564542 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms