RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 LTBP4Q8N2S1 1624 aa37.77■■■■□ 3.64
NME3-206ENST00000564252 PLA2R1Q13018 1463 aa37.77■■■■□ 3.64
NME3-206ENST00000564252 MAST1Q9Y2H9 1570 aa37.76■■■■□ 3.63
NME3-206ENST00000564252 MYOM3Q5VTT5 1437 aa37.75■■■■□ 3.63
NME3-206ENST00000564252 MIA2Q96PC5 1412 aa37.74■■■■□ 3.63
NME3-206ENST00000564252 NCKAP5LQ9HCH0 1330 aa37.74■■■■□ 3.63
NME3-206ENST00000564252 TCOF1Q13428 1488 aaKnown RBP37.71■■■■□ 3.63
NME3-206ENST00000564252 A2ML1A8K2U0 1454 aa37.71■■■■□ 3.63
NME3-206ENST00000564252 PZPP20742 1482 aa37.71■■■■□ 3.63
NME3-206ENST00000564252 WASHC2CQ9Y4E1 1318 aa37.68■■■■□ 3.62
NME3-206ENST00000564252 PKD2Q13563 968 aa37.68■■■■□ 3.62
NME3-206ENST00000564252 DNMT1P26358 1616 aaKnown RBP37.68■■■■□ 3.62
NME3-206ENST00000564252 FBXO31Q5XUX0 539 aaPredicted RBP37.67■■■■□ 3.62
NME3-206ENST00000564252 RNF17Q9BXT8 1623 aaKnown RBP37.65■■■■□ 3.62
NME3-206ENST00000564252 TNRQ92752 1358 aa37.65■■■■□ 3.62
NME3-206ENST00000564252 IQSEC2Q5JU85 1478 aa37.6■■■■□ 3.61
NME3-206ENST00000564252 EIF2AK4Q9P2K8 1649 aaKnown RBP37.6■■■■□ 3.61
NME3-206ENST00000564252 ZNF335Q9H4Z2 1342 aaPredicted RBP37.56■■■■□ 3.6
NME3-206ENST00000564252 ABCC3O15438 1527 aa37.55■■■■□ 3.6
NME3-206ENST00000564252 ZC3H13Q5T200 1668 aaKnown RBP37.54■■■■□ 3.6
NME3-206ENST00000564252 APLP2Q06481 763 aa37.53■■■■□ 3.6
NME3-206ENST00000564252 MROH1Q8NDA8 1641 aa37.53■■■■□ 3.6
NME3-206ENST00000564252 PTPN23Q9H3S7 1636 aa37.51■■■■□ 3.6
NME3-206ENST00000564252 DUOX2Q9NRD8 1548 aa37.51■■■■□ 3.59
NME3-206ENST00000564252 CROCC2H7BZ55 1655 aa37.5■■■■□ 3.59
NME3-206ENST00000564252 NLRP1Q9C000 1473 aa37.5■■■■□ 3.59
NME3-206ENST00000564252 POLR1AO95602 1720 aaPredicted RBP37.5■■■■□ 3.59
NME3-206ENST00000564252 SHANK2Q9UPX8 1470 aa37.49■■■■□ 3.59
NME3-206ENST00000564252 ABCC5O15440 1437 aa37.48■■■■□ 3.59
NME3-206ENST00000564252 NEURL4Q96JN8 1562 aa37.47■■■■□ 3.59
NME3-206ENST00000564252 SPATA31D1Q6ZQQ2 1576 aa37.44■■■■□ 3.58
NME3-206ENST00000564252 UGGT1Q9NYU2 1555 aa37.43■■■■□ 3.58
NME3-206ENST00000564252 FGD6Q6ZV73 1430 aa37.43■■■■□ 3.58
NME3-206ENST00000564252 KIF15Q9NS87 1388 aa37.42■■■■□ 3.58
NME3-206ENST00000564252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.42■■■■□ 3.58
NME3-206ENST00000564252 CEP152O94986 1710 aa37.41■■■■□ 3.58
NME3-206ENST00000564252 DAPK1P53355 1430 aa37.4■■■■□ 3.58
NME3-206ENST00000564252 THEMISQ8N1K5 641 aaPredicted RBP37.4■■■■□ 3.58
NME3-206ENST00000564252 ERVK-7P63135 1459 aa37.39■■■■□ 3.58
NME3-206ENST00000564252 ERBINQ96RT1 1412 aa37.38■■■■□ 3.57
NME3-206ENST00000564252 PRDM15P57071 1507 aaPredicted RBP37.36■■■■□ 3.57
NME3-206ENST00000564252 ANKLE2Q86XL3 938 aa37.35■■■■□ 3.57
NME3-206ENST00000564252 RRP7BPQ9NSQ0 103 aa37.35■■■■□ 3.57
NME3-206ENST00000564252 DEPDC5O75140 1603 aa37.32■■■■□ 3.57
NME3-206ENST00000564252 MED14O60244 1454 aa37.3■■■■□ 3.56
NME3-206ENST00000564252 CFAP65Q6ZU64 1925 aaKnown RBP37.27■■■■□ 3.56
NME3-206ENST00000564252 UBAP1LF5GYI3 381 aa37.26■■■■□ 3.56
NME3-206ENST00000564252 NPHP4O75161 1426 aaPredicted RBP37.26■■■■□ 3.55
NME3-206ENST00000564252 ARHGAP31Q2M1Z3 1444 aa37.26■■■■□ 3.55
NME3-206ENST00000564252 CPS1P31327 1500 aa37.25■■■■□ 3.55
NME3-206ENST00000564252 VWDEQ8N2E2 1590 aa37.24■■■■□ 3.55
NME3-206ENST00000564252 UBR1Q8IWV7 1749 aa37.22■■■■□ 3.55
NME3-206ENST00000564252 ANKRD30AQ9BXX3 1397 aa37.22■■■■□ 3.55
NME3-206ENST00000564252 CHIC2Q9UKJ5 165 aa37.22■■■■□ 3.55
NME3-206ENST00000564252 IQGAP1P46940 1657 aa37.21■■■■□ 3.55
NME3-206ENST00000564252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.18■■■■□ 3.54
NME3-206ENST00000564252 KANK1Q14678 1352 aa37.16■■■■□ 3.54
NME3-206ENST00000564252 DISP3Q9P2K9 1392 aa37.16■■■■□ 3.54
NME3-206ENST00000564252 ADGRL2O95490 1459 aa37.14■■■■□ 3.54
NME3-206ENST00000564252 LMTK2Q8IWU2 1503 aa37.13■■■■□ 3.53
NME3-206ENST00000564252 ARHGAP23Q9P227 1491 aa37.09■■■■□ 3.53
NME3-206ENST00000564252 SLIT1O75093 1534 aa37.08■■■■□ 3.53
NME3-206ENST00000564252 SCAF11Q99590 1463 aaKnown RBP37.07■■■■□ 3.53
NME3-206ENST00000564252 FAM50AQ14320 339 aaKnown RBP37.07■■■■□ 3.52
NME3-206ENST00000564252 PIK3C2BO00750 1634 aa37.06■■■■□ 3.52
NME3-206ENST00000564252 STRCP1A6NGW2 1772 aa37.05■■■■□ 3.52
NME3-206ENST00000564252 LTKP29376 864 aa37.02■■■■□ 3.52
NME3-206ENST00000564252 EFCAB6Q5THR3 1501 aa37■■■■□ 3.51
NME3-206ENST00000564252 TOM1O60784 492 aa37■■■■□ 3.51
NME3-206ENST00000564252 TXNDC2Q86VQ3 553 aa36.98■■■■□ 3.51
NME3-206ENST00000564252 SYNMO15061 1565 aa36.98■■■■□ 3.51
NME3-206ENST00000564252 KDM5AP29375 1690 aaKnown RBP36.97■■■■□ 3.51
NME3-206ENST00000564252 ILDR2Q71H61 639 aa36.97■■■■□ 3.51
NME3-206ENST00000564252 ANKRD50Q9ULJ7 1429 aa36.96■■■■□ 3.51
NME3-206ENST00000564252 LRRC7Q96NW7 1537 aa36.95■■■■□ 3.51
NME3-206ENST00000564252 NOS1P29475 1434 aa36.95■■■■□ 3.51
NME3-206ENST00000564252 PIP4K2BP78356 416 aa36.95■■■■□ 3.51
NME3-206ENST00000564252 ALKQ9UM73 1620 aa36.95■■■■□ 3.51
NME3-206ENST00000564252 TMEM2Q9UHN6 1383 aa36.94■■■■□ 3.5
NME3-206ENST00000564252 SCAF1Q9H7N4 1312 aaKnown RBP36.94■■■■□ 3.5
NME3-206ENST00000564252 IDI1Q13907 227 aa36.93■■■■□ 3.5
NME3-206ENST00000564252 EID1Q9Y6B2 187 aa36.92■■■■□ 3.5
NME3-206ENST00000564252 STAG3Q9UJ98 1225 aa36.9■■■■□ 3.5
NME3-206ENST00000564252 HSPA1LP34931 641 aa36.88■■■■□ 3.49
NME3-206ENST00000564252 RPRD2Q5VT52 1461 aaKnown RBP36.85■■■■□ 3.49
NME3-206ENST00000564252 ADGRB3O60242 1522 aa36.85■■■■□ 3.49
NME3-206ENST00000564252 TET3O43151 1660 aa36.83■■■■□ 3.49
NME3-206ENST00000564252 UNC13BO14795 1591 aa36.82■■■■□ 3.48
NME3-206ENST00000564252 SLC52A1Q9NWF4 448 aa36.8■■■■□ 3.48
NME3-206ENST00000564252 ROCK1Q13464 1354 aa36.78■■■■□ 3.48
NME3-206ENST00000564252 GCC2Q8IWJ2 1684 aa36.77■■■■□ 3.48
NME3-206ENST00000564252 XIRP1Q702N8 1843 aaKnown RBP36.75■■■■□ 3.47
NME3-206ENST00000564252 SOCS7O14512 581 aa36.7■■■■□ 3.47
NME3-206ENST00000564252 MED1Q15648 1581 aaPredicted RBP36.67■■■■□ 3.46
NME3-206ENST00000564252 MYO5BQ9ULV0 1848 aa36.67■■■■□ 3.46
NME3-206ENST00000564252 E9PCH4 1651 aa36.67■■■■□ 3.46
NME3-206ENST00000564252 IQGAP3Q86VI3 1631 aa36.67■■■■□ 3.46
NME3-206ENST00000564252 SLC26A8Q96RN1 970 aa36.66■■■■□ 3.46
NME3-206ENST00000564252 ZFYVE9O95405 1425 aa36.66■■■■□ 3.46
NME3-206ENST00000564252 PPARGC1BQ86YN6 1023 aaKnown RBP36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms