RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.41
TCF4-221ENST00000563888 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
TCF4-221ENST00000563888 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
TCF4-221ENST00000563888 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
TCF4-221ENST00000563888 PYGBP11216 843 aa12.5□□□□□ -0.41
TCF4-221ENST00000563888 ZNF335Q9H4Z2 1342 aaPredicted RBP12.5□□□□□ -0.41
TCF4-221ENST00000563888 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
TCF4-221ENST00000563888 SIGLEC1Q9BZZ2 1709 aa12.5□□□□□ -0.41
TCF4-221ENST00000563888 FER1L4A9Z1Z3 1794 aa12.49□□□□□ -0.41
TCF4-221ENST00000563888 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
TCF4-221ENST00000563888 PLEKHD1A6NEE1 506 aa12.48□□□□□ -0.41
TCF4-221ENST00000563888 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
TCF4-221ENST00000563888 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
TCF4-221ENST00000563888 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
TCF4-221ENST00000563888 EFCAB5A4FU69 1503 aa12.47□□□□□ -0.41
TCF4-221ENST00000563888 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
TCF4-221ENST00000563888 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
TCF4-221ENST00000563888 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.42
TCF4-221ENST00000563888 MAGI2Q86UL8 1455 aa12.46□□□□□ -0.42
TCF4-221ENST00000563888 RICTORQ6R327 1708 aa12.45□□□□□ -0.42
TCF4-221ENST00000563888 STK25O00506 426 aa12.45□□□□□ -0.42
TCF4-221ENST00000563888 ATP10AO60312 1499 aa12.45□□□□□ -0.42
TCF4-221ENST00000563888 SCAPERQ9BY12 1400 aa12.44□□□□□ -0.42
TCF4-221ENST00000563888 GABBR2O75899 941 aa12.43□□□□□ -0.42
TCF4-221ENST00000563888 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
TCF4-221ENST00000563888 CLCN6P51797 869 aa12.43□□□□□ -0.42
TCF4-221ENST00000563888 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
TCF4-221ENST00000563888 NCOA1Q15788 1441 aa12.43□□□□□ -0.42
TCF4-221ENST00000563888 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
TCF4-221ENST00000563888 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
TCF4-221ENST00000563888 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
TCF4-221ENST00000563888 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
TCF4-221ENST00000563888 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
TCF4-221ENST00000563888 TOM1O60784 492 aa12.39□□□□□ -0.43
TCF4-221ENST00000563888 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
TCF4-221ENST00000563888 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
TCF4-221ENST00000563888 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
TCF4-221ENST00000563888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
TCF4-221ENST00000563888 ZNF467Q7Z7K2 595 aaPredicted RBP12.36□□□□□ -0.43
TCF4-221ENST00000563888 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
TCF4-221ENST00000563888 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
TCF4-221ENST00000563888 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
TCF4-221ENST00000563888 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
TCF4-221ENST00000563888 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
TCF4-221ENST00000563888 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
TCF4-221ENST00000563888 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
TCF4-221ENST00000563888 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
TCF4-221ENST00000563888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
TCF4-221ENST00000563888 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
TCF4-221ENST00000563888 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
TCF4-221ENST00000563888 EFCAB2Q5VUJ9 269 aa12.34□□□□□ -0.43
TCF4-221ENST00000563888 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
TCF4-221ENST00000563888 PLCH2O75038 1416 aa12.31□□□□□ -0.44
TCF4-221ENST00000563888 BCANQ96GW7 911 aa12.31□□□□□ -0.44
TCF4-221ENST00000563888 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
TCF4-221ENST00000563888 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
TCF4-221ENST00000563888 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
TCF4-221ENST00000563888 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
TCF4-221ENST00000563888 C3P01024 1663 aa12.29□□□□□ -0.44
TCF4-221ENST00000563888 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
TCF4-221ENST00000563888 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.45
TCF4-221ENST00000563888 PRXQ9BXM0 1461 aa12.27□□□□□ -0.45
TCF4-221ENST00000563888 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
TCF4-221ENST00000563888 ZMYM3Q14202 1370 aa12.26□□□□□ -0.45
TCF4-221ENST00000563888 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
TCF4-221ENST00000563888 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
TCF4-221ENST00000563888 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
TCF4-221ENST00000563888 ZNF518AQ6AHZ1 1483 aa12.25□□□□□ -0.45
TCF4-221ENST00000563888 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
TCF4-221ENST00000563888 CNTLNQ9NXG0 1405 aa12.24□□□□□ -0.45
TCF4-221ENST00000563888 NPATQ14207 1427 aa12.22□□□□□ -0.45
TCF4-221ENST00000563888 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
TCF4-221ENST00000563888 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
TCF4-221ENST00000563888 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
TCF4-221ENST00000563888 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
TCF4-221ENST00000563888 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
TCF4-221ENST00000563888 PSEN1P49768 467 aa12.2□□□□□ -0.46
TCF4-221ENST00000563888 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
TCF4-221ENST00000563888 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
TCF4-221ENST00000563888 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
TCF4-221ENST00000563888 AGLP35573 1532 aa12.19□□□□□ -0.46
TCF4-221ENST00000563888 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
TCF4-221ENST00000563888 CPS1P31327 1500 aa12.17□□□□□ -0.46
TCF4-221ENST00000563888 ARHGAP5Q13017 1502 aa12.17□□□□□ -0.46
TCF4-221ENST00000563888 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
TCF4-221ENST00000563888 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
TCF4-221ENST00000563888 MAP3K13O43283 966 aa12.16□□□□□ -0.46
TCF4-221ENST00000563888 GGT6Q6P531 493 aa12.16□□□□□ -0.46
TCF4-221ENST00000563888 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
TCF4-221ENST00000563888 KDM5CP41229 1560 aa12.16□□□□□ -0.46
TCF4-221ENST00000563888 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
TCF4-221ENST00000563888 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
TCF4-221ENST00000563888 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
TCF4-221ENST00000563888 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
TCF4-221ENST00000563888 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
TCF4-221ENST00000563888 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
TCF4-221ENST00000563888 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
TCF4-221ENST00000563888 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
TCF4-221ENST00000563888 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
TCF4-221ENST00000563888 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms