RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
HERPUD1-207ENST00000563781 DISP1Q96F81 1524 aa8.41□□□□□ -1.06
HERPUD1-207ENST00000563781 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-207ENST00000563781 KDM2AQ9Y2K7 1162 aa8.41□□□□□ -1.06
HERPUD1-207ENST00000563781 ARHGEF11O15085 1522 aa8.39□□□□□ -1.07
HERPUD1-207ENST00000563781 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
HERPUD1-207ENST00000563781 SAMD9Q5K651 1589 aa8.38□□□□□ -1.07
HERPUD1-207ENST00000563781 ARHGAP35Q9NRY4 1499 aa8.38□□□□□ -1.07
HERPUD1-207ENST00000563781 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
HERPUD1-207ENST00000563781 KIAA0556O60303 1618 aa8.37□□□□□ -1.07
HERPUD1-207ENST00000563781 PDE4AP27815 886 aa8.37□□□□□ -1.07
HERPUD1-207ENST00000563781 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
HERPUD1-207ENST00000563781 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
HERPUD1-207ENST00000563781 EFCAB5A4FU69 1503 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 RANGAP1P46060 587 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 TMEM92Q6UXU6 159 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 ARAP1Q96P48 1450 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 CLIP1P30622 1438 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 FHOD3Q2V2M9 1422 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
HERPUD1-207ENST00000563781 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
HERPUD1-207ENST00000563781 GPHNQ9NQX3 736 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-207ENST00000563781 KIF3CO14782 793 aa8.34□□□□□ -1.07
HERPUD1-207ENST00000563781 P3H3Q8IVL6 736 aa8.34□□□□□ -1.07
HERPUD1-207ENST00000563781 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-207ENST00000563781 PTPRGP23470 1445 aa8.33□□□□□ -1.08
HERPUD1-207ENST00000563781 MAMSTRQ6ZN01 415 aa8.33□□□□□ -1.08
HERPUD1-207ENST00000563781 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-207ENST00000563781 C2orf72A6NCS6 295 aa8.32□□□□□ -1.08
HERPUD1-207ENST00000563781 MFSD10Q14728 455 aa8.32□□□□□ -1.08
HERPUD1-207ENST00000563781 LHX8Q68G74 356 aa8.32□□□□□ -1.08
HERPUD1-207ENST00000563781 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
HERPUD1-207ENST00000563781 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-207ENST00000563781 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-207ENST00000563781 ARXQ96QS3 562 aa8.3□□□□□ -1.08
HERPUD1-207ENST00000563781 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
HERPUD1-207ENST00000563781 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
HERPUD1-207ENST00000563781 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-207ENST00000563781 FOXK1P85037 733 aa8.29□□□□□ -1.08
HERPUD1-207ENST00000563781 PLB1Q6P1J6 1458 aa8.29□□□□□ -1.08
HERPUD1-207ENST00000563781 ABCA8O94911 1581 aa8.29□□□□□ -1.08
HERPUD1-207ENST00000563781 UACAQ9BZF9 1416 aa8.29□□□□□ -1.08
HERPUD1-207ENST00000563781 DSG2Q14126 1118 aa8.28□□□□□ -1.08
HERPUD1-207ENST00000563781 CYB5RLQ6IPT4 315 aa8.28□□□□□ -1.08
HERPUD1-207ENST00000563781 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
HERPUD1-207ENST00000563781 OTUD5Q96G74 571 aa8.28□□□□□ -1.08
HERPUD1-207ENST00000563781 FMN1Q68DA7 1419 aa8.28□□□□□ -1.08
HERPUD1-207ENST00000563781 UHRF1BP1LA0JNW5 1464 aa8.27□□□□□ -1.09
HERPUD1-207ENST00000563781 PPP1R15BQ5SWA1 713 aa8.27□□□□□ -1.09
HERPUD1-207ENST00000563781 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
HERPUD1-207ENST00000563781 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
HERPUD1-207ENST00000563781 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
HERPUD1-207ENST00000563781 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
HERPUD1-207ENST00000563781 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-207ENST00000563781 ADCY10Q96PN6 1610 aa8.25□□□□□ -1.09
HERPUD1-207ENST00000563781 PLPP6Q8IY26 295 aa8.25□□□□□ -1.09
HERPUD1-207ENST00000563781 CASKIN1Q8WXD9 1431 aa8.25□□□□□ -1.09
HERPUD1-207ENST00000563781 PCF11O94913 1555 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-207ENST00000563781 RAPGEF6Q8TEU7 1601 aa8.25□□□□□ -1.09
HERPUD1-207ENST00000563781 CAMK2BQ13554 666 aa8.24□□□□□ -1.09
HERPUD1-207ENST00000563781 E2F4Q16254 413 aa8.24□□□□□ -1.09
HERPUD1-207ENST00000563781 FYCO1Q9BQS8 1478 aa8.24□□□□□ -1.09
HERPUD1-207ENST00000563781 KDM5BQ9UGL1 1544 aa8.24□□□□□ -1.09
HERPUD1-207ENST00000563781 ATP10BO94823 1461 aa8.23□□□□□ -1.09
HERPUD1-207ENST00000563781 EPRSP07814 1512 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-207ENST00000563781 CDK13Q14004 1512 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-207ENST00000563781 ARID3CA6NKF2 412 aa8.21□□□□□ -1.1
HERPUD1-207ENST00000563781 HECW1Q76N89 1606 aa8.21□□□□□ -1.1
HERPUD1-207ENST00000563781 KCNV2Q8TDN2 545 aa8.2□□□□□ -1.1
HERPUD1-207ENST00000563781 EMILIN3Q9NT22 766 aa8.19□□□□□ -1.1
HERPUD1-207ENST00000563781 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
HERPUD1-207ENST00000563781 ZCCHC11Q5TAX3 1644 aaKnown RBP8.18□□□□□ -1.1
HERPUD1-207ENST00000563781 TULP1O00294 542 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-207ENST00000563781 SLC34A2O95436 690 aa8.18□□□□□ -1.1
HERPUD1-207ENST00000563781 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-207ENST00000563781 MAPKBP1O60336 1514 aa8.18□□□□□ -1.1
HERPUD1-207ENST00000563781 LRRIQ1Q96JM4 1722 aa8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 ARHGEF1Q92888 912 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 ARIH1Q9Y4X5 557 aaPredicted RBP8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 ASXL2Q76L83 1435 aa8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 MAGI3Q5TCQ9 1506 aa8.17□□□□□ -1.1
HERPUD1-207ENST00000563781 MAP3K1Q13233 1512 aa8.16□□□□□ -1.1
HERPUD1-207ENST00000563781 OXER1Q8TDS5 423 aa8.16□□□□□ -1.1
HERPUD1-207ENST00000563781 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
HERPUD1-207ENST00000563781 TIAM1Q13009 1591 aa8.15□□□□□ -1.1
HERPUD1-207ENST00000563781 WDR7Q9Y4E6 1490 aa8.15□□□□□ -1.1
HERPUD1-207ENST00000563781 PTCD2Q8WV60 388 aaKnown RBP8.15□□□□□ -1.1
HERPUD1-207ENST00000563781 CFAP43Q8NDM7 1665 aa8.14□□□□□ -1.11
HERPUD1-207ENST00000563781 TROQ12816 1431 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-207ENST00000563781 SNPHO15079 494 aa8.13□□□□□ -1.11
HERPUD1-207ENST00000563781 DOK7Q18PE1 504 aa8.13□□□□□ -1.11
HERPUD1-207ENST00000563781 KANK4Q5T7N3 995 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-207ENST00000563781 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
HERPUD1-207ENST00000563781 LRRC9Q6ZRR7 1453 aa8.13□□□□□ -1.11
HERPUD1-207ENST00000563781 PLEKHD1A6NEE1 506 aa8.12□□□□□ -1.11
HERPUD1-207ENST00000563781 DPYSL4O14531 572 aa8.12□□□□□ -1.11
HERPUD1-207ENST00000563781 NBR1Q14596 966 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms