RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
KARS-203ENST00000562875 WIZO95785 1651 aa12.57□□□□□ -0.4
KARS-203ENST00000562875 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
KARS-203ENST00000562875 GPR37O15354 613 aa12.56□□□□□ -0.4
KARS-203ENST00000562875 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
KARS-203ENST00000562875 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
KARS-203ENST00000562875 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
KARS-203ENST00000562875 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
KARS-203ENST00000562875 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
KARS-203ENST00000562875 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
KARS-203ENST00000562875 FCHSD2O94868 740 aa12.53□□□□□ -0.4
KARS-203ENST00000562875 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
KARS-203ENST00000562875 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
KARS-203ENST00000562875 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.41
KARS-203ENST00000562875 SLC24A3Q9HC58 644 aa12.52□□□□□ -0.41
KARS-203ENST00000562875 LOC105371045A0A1W2PR82 267 aa12.51□□□□□ -0.41
KARS-203ENST00000562875 ST18O60284 1047 aa12.51□□□□□ -0.41
KARS-203ENST00000562875 PTGDRQ13258 359 aa12.51□□□□□ -0.41
KARS-203ENST00000562875 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
KARS-203ENST00000562875 HIC1Q14526 733 aa12.5□□□□□ -0.41
KARS-203ENST00000562875 GNPATO15228 680 aa12.49□□□□□ -0.41
KARS-203ENST00000562875 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
KARS-203ENST00000562875 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
KARS-203ENST00000562875 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
KARS-203ENST00000562875 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
KARS-203ENST00000562875 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
KARS-203ENST00000562875 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
KARS-203ENST00000562875 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
KARS-203ENST00000562875 FECHP22830 423 aa12.45□□□□□ -0.42
KARS-203ENST00000562875 ERBB3P21860 1342 aa12.44□□□□□ -0.42
KARS-203ENST00000562875 EMP3P54852 163 aa12.44□□□□□ -0.42
KARS-203ENST00000562875 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
KARS-203ENST00000562875 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
KARS-203ENST00000562875 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
KARS-203ENST00000562875 AK7Q96M32 723 aa12.43□□□□□ -0.42
KARS-203ENST00000562875 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
KARS-203ENST00000562875 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
KARS-203ENST00000562875 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
KARS-203ENST00000562875 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
KARS-203ENST00000562875 PTPREP23469 700 aa12.41□□□□□ -0.42
KARS-203ENST00000562875 IRF6O14896 467 aa12.38□□□□□ -0.43
KARS-203ENST00000562875 COL9A1P20849 921 aa12.38□□□□□ -0.43
KARS-203ENST00000562875 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
KARS-203ENST00000562875 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
KARS-203ENST00000562875 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
KARS-203ENST00000562875 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
KARS-203ENST00000562875 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
KARS-203ENST00000562875 TRIM66O15016 1216 aa12.34□□□□□ -0.43
KARS-203ENST00000562875 PRSS12P56730 875 aa12.34□□□□□ -0.43
KARS-203ENST00000562875 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
KARS-203ENST00000562875 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
KARS-203ENST00000562875 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
KARS-203ENST00000562875 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
KARS-203ENST00000562875 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
KARS-203ENST00000562875 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
KARS-203ENST00000562875 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
KARS-203ENST00000562875 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
KARS-203ENST00000562875 PSEN2P49810 448 aa12.31□□□□□ -0.44
KARS-203ENST00000562875 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
KARS-203ENST00000562875 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
KARS-203ENST00000562875 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
KARS-203ENST00000562875 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
KARS-203ENST00000562875 PDE4DQ08499 809 aa12.29□□□□□ -0.44
KARS-203ENST00000562875 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
KARS-203ENST00000562875 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
KARS-203ENST00000562875 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
KARS-203ENST00000562875 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
KARS-203ENST00000562875 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
KARS-203ENST00000562875 EEA1Q15075 1411 aa12.28□□□□□ -0.44
KARS-203ENST00000562875 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
KARS-203ENST00000562875 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
KARS-203ENST00000562875 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
KARS-203ENST00000562875 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
KARS-203ENST00000562875 PBX2P40425 430 aa12.26□□□□□ -0.45
KARS-203ENST00000562875 PROX2Q3B8N5 592 aa12.26□□□□□ -0.45
KARS-203ENST00000562875 OATP04181 439 aa12.25□□□□□ -0.45
KARS-203ENST00000562875 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
KARS-203ENST00000562875 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
KARS-203ENST00000562875 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
KARS-203ENST00000562875 AMHR2Q16671 573 aa12.24□□□□□ -0.45
KARS-203ENST00000562875 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
KARS-203ENST00000562875 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
KARS-203ENST00000562875 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
KARS-203ENST00000562875 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
KARS-203ENST00000562875 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
KARS-203ENST00000562875 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
KARS-203ENST00000562875 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
KARS-203ENST00000562875 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.45
KARS-203ENST00000562875 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
KARS-203ENST00000562875 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
KARS-203ENST00000562875 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
KARS-203ENST00000562875 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
KARS-203ENST00000562875 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
KARS-203ENST00000562875 NUDT18Q6ZVK8 323 aa12.2□□□□□ -0.46
KARS-203ENST00000562875 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
KARS-203ENST00000562875 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
KARS-203ENST00000562875 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
KARS-203ENST00000562875 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
KARS-203ENST00000562875 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
KARS-203ENST00000562875 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms