RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 TSPY4P0CV99 314 aa14.52□□□□□ -0.09
CHRFAM7A-204ENST00000562729 TSPY10P0CW01 314 aa14.52□□□□□ -0.09
CHRFAM7A-204ENST00000562729 CEBPAP49715 358 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-204ENST00000562729 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-204ENST00000562729 A2MP01023 1474 aa14.51□□□□□ -0.09
CHRFAM7A-204ENST00000562729 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
CHRFAM7A-204ENST00000562729 RSPH4AQ5TD94 716 aa14.51□□□□□ -0.09
CHRFAM7A-204ENST00000562729 ADGBQ8N7X0 1667 aa14.51□□□□□ -0.09
CHRFAM7A-204ENST00000562729 CCDC141Q6ZP82 1450 aa14.5□□□□□ -0.09
CHRFAM7A-204ENST00000562729 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
CHRFAM7A-204ENST00000562729 GGT6Q6P531 493 aa14.49□□□□□ -0.09
CHRFAM7A-204ENST00000562729 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
CHRFAM7A-204ENST00000562729 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
CHRFAM7A-204ENST00000562729 PREX1Q8TCU6 1659 aa14.48□□□□□ -0.09
CHRFAM7A-204ENST00000562729 HSPA2P54652 639 aa14.47□□□□□ -0.09
CHRFAM7A-204ENST00000562729 RTEL1-TNFRSF6BF6WH68 1400 aa14.47□□□□□ -0.09
CHRFAM7A-204ENST00000562729 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
CHRFAM7A-204ENST00000562729 C3P01024 1663 aa14.46□□□□□ -0.1
CHRFAM7A-204ENST00000562729 ARHGEF5Q12774 1597 aa14.45□□□□□ -0.1
CHRFAM7A-204ENST00000562729 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
CHRFAM7A-204ENST00000562729 PLXNC1O60486 1568 aa14.44□□□□□ -0.1
CHRFAM7A-204ENST00000562729 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
CHRFAM7A-204ENST00000562729 CLTCQ00610 1675 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-204ENST00000562729 KIF3BO15066 747 aa14.43□□□□□ -0.1
CHRFAM7A-204ENST00000562729 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-204ENST00000562729 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
CHRFAM7A-204ENST00000562729 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
CHRFAM7A-204ENST00000562729 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
CHRFAM7A-204ENST00000562729 ZBTB22O15209 634 aa14.4□□□□□ -0.1
CHRFAM7A-204ENST00000562729 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
CHRFAM7A-204ENST00000562729 SETD1BQ9UPS6 1966 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-204ENST00000562729 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
CHRFAM7A-204ENST00000562729 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
CHRFAM7A-204ENST00000562729 NPATQ14207 1427 aa14.36□□□□□ -0.11
CHRFAM7A-204ENST00000562729 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
CHRFAM7A-204ENST00000562729 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
CHRFAM7A-204ENST00000562729 KDM5DQ9BY66 1539 aa14.34□□□□□ -0.11
CHRFAM7A-204ENST00000562729 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.12
CHRFAM7A-204ENST00000562729 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.12
CHRFAM7A-204ENST00000562729 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
CHRFAM7A-204ENST00000562729 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
CHRFAM7A-204ENST00000562729 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 CHIC2Q9UKJ5 165 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 KIF15Q9NS87 1388 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 DAPK1P53355 1430 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
CHRFAM7A-204ENST00000562729 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-204ENST00000562729 MYO3AQ8NEV4 1616 aa14.3□□□□□ -0.12
CHRFAM7A-204ENST00000562729 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-204ENST00000562729 ABCC5O15440 1437 aa14.3□□□□□ -0.12
CHRFAM7A-204ENST00000562729 PTPRKQ15262 1439 aa14.3□□□□□ -0.12
CHRFAM7A-204ENST00000562729 ANKRD30AQ9BXX3 1397 aa14.29□□□□□ -0.12
CHRFAM7A-204ENST00000562729 TCOF1Q13428 1488 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-204ENST00000562729 CAMSAP1Q5T5Y3 1602 aa14.28□□□□□ -0.12
CHRFAM7A-204ENST00000562729 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
CHRFAM7A-204ENST00000562729 RNF17Q9BXT8 1623 aaKnown RBP14.27□□□□□ -0.12
CHRFAM7A-204ENST00000562729 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
CHRFAM7A-204ENST00000562729 TNRQ92752 1358 aa14.27□□□□□ -0.12
CHRFAM7A-204ENST00000562729 PPARGC1BQ86YN6 1023 aaKnown RBP14.27□□□□□ -0.13
CHRFAM7A-204ENST00000562729 STRCQ7RTU9 1775 aa14.27□□□□□ -0.13
CHRFAM7A-204ENST00000562729 PZPP20742 1482 aa14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 KANK1Q14678 1352 aa14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 FBXO31Q5XUX0 539 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-204ENST00000562729 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
CHRFAM7A-204ENST00000562729 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
CHRFAM7A-204ENST00000562729 ABCC3O15438 1527 aa14.24□□□□□ -0.13
CHRFAM7A-204ENST00000562729 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
CHRFAM7A-204ENST00000562729 CEP152O94986 1710 aa14.23□□□□□ -0.13
CHRFAM7A-204ENST00000562729 A2ML1A8K2U0 1454 aa14.23□□□□□ -0.13
CHRFAM7A-204ENST00000562729 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
CHRFAM7A-204ENST00000562729 ITGAEP38570 1179 aa14.22□□□□□ -0.13
CHRFAM7A-204ENST00000562729 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
CHRFAM7A-204ENST00000562729 PTPRTO14522 1441 aa14.22□□□□□ -0.13
CHRFAM7A-204ENST00000562729 PKD2Q13563 968 aa14.21□□□□□ -0.13
CHRFAM7A-204ENST00000562729 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHRFAM7A-204ENST00000562729 THEMISQ8N1K5 641 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-204ENST00000562729 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
CHRFAM7A-204ENST00000562729 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
CHRFAM7A-204ENST00000562729 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-204ENST00000562729 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
CHRFAM7A-204ENST00000562729 CFAP65Q6ZU64 1925 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-204ENST00000562729 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
CHRFAM7A-204ENST00000562729 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
CHRFAM7A-204ENST00000562729 DEPDC5O75140 1603 aa14.16□□□□□ -0.14
CHRFAM7A-204ENST00000562729 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
CHRFAM7A-204ENST00000562729 STAG3Q9UJ98 1225 aa14.16□□□□□ -0.14
CHRFAM7A-204ENST00000562729 ERVK-7P63135 1459 aa14.16□□□□□ -0.14
CHRFAM7A-204ENST00000562729 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
CHRFAM7A-204ENST00000562729 SPATA31D1Q6ZQQ2 1576 aa14.15□□□□□ -0.14
CHRFAM7A-204ENST00000562729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHRFAM7A-204ENST00000562729 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-204ENST00000562729 ARHGAP31Q2M1Z3 1444 aa14.12□□□□□ -0.15
CHRFAM7A-204ENST00000562729 HAX1O00165 279 aa14.11□□□□□ -0.15
CHRFAM7A-204ENST00000562729 ZNF335Q9H4Z2 1342 aaPredicted RBP14.11□□□□□ -0.15
CHRFAM7A-204ENST00000562729 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms