RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
CCP110-206ENST00000562616 UHRF1BP1LA0JNW5 1464 aa13.92□□□□□ -0.18
CCP110-206ENST00000562616 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
CCP110-206ENST00000562616 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
CCP110-206ENST00000562616 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
CCP110-206ENST00000562616 TMEM132AQ24JP5 1023 aa13.91□□□□□ -0.18
CCP110-206ENST00000562616 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
CCP110-206ENST00000562616 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
CCP110-206ENST00000562616 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
CCP110-206ENST00000562616 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
CCP110-206ENST00000562616 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
CCP110-206ENST00000562616 PCF11O94913 1555 aaKnown RBP13.88□□□□□ -0.19
CCP110-206ENST00000562616 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
CCP110-206ENST00000562616 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
CCP110-206ENST00000562616 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
CCP110-206ENST00000562616 ATP1B4Q9UN42 357 aaPredicted RBP13.86□□□□□ -0.19
CCP110-206ENST00000562616 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
CCP110-206ENST00000562616 NUP153P49790 1475 aaKnown RBP13.86□□□□□ -0.19
CCP110-206ENST00000562616 PLCG2P16885 1265 aa13.85□□□□□ -0.19
CCP110-206ENST00000562616 GSE1Q14687 1217 aa13.85□□□□□ -0.19
CCP110-206ENST00000562616 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
CCP110-206ENST00000562616 SNPHO15079 494 aa13.85□□□□□ -0.19
CCP110-206ENST00000562616 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
CCP110-206ENST00000562616 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
CCP110-206ENST00000562616 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
CCP110-206ENST00000562616 ATP10BO94823 1461 aa13.82□□□□□ -0.2
CCP110-206ENST00000562616 CASKIN1Q8WXD9 1431 aa13.81□□□□□ -0.2
CCP110-206ENST00000562616 CDK13Q14004 1512 aaKnown RBP13.81□□□□□ -0.2
CCP110-206ENST00000562616 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
CCP110-206ENST00000562616 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
CCP110-206ENST00000562616 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
CCP110-206ENST00000562616 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
CCP110-206ENST00000562616 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
CCP110-206ENST00000562616 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
CCP110-206ENST00000562616 RNF25Q96BH1 459 aaPredicted RBP13.77□□□□□ -0.21
CCP110-206ENST00000562616 WDR7Q9Y4E6 1490 aa13.77□□□□□ -0.21
CCP110-206ENST00000562616 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
CCP110-206ENST00000562616 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
CCP110-206ENST00000562616 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
CCP110-206ENST00000562616 MARVELD3Q96A59 401 aa13.75□□□□□ -0.21
CCP110-206ENST00000562616 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
CCP110-206ENST00000562616 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
CCP110-206ENST00000562616 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
CCP110-206ENST00000562616 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
CCP110-206ENST00000562616 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
CCP110-206ENST00000562616 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 HOMEZQ8IX15 550 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 RYDENQ9NUL5 291 aaKnown RBP13.72□□□□□ -0.21
CCP110-206ENST00000562616 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
CCP110-206ENST00000562616 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
CCP110-206ENST00000562616 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.72□□□□□ -0.21
CCP110-206ENST00000562616 PLEKHD1A6NEE1 506 aa13.71□□□□□ -0.21
CCP110-206ENST00000562616 CFAP43Q8NDM7 1665 aa13.71□□□□□ -0.21
CCP110-206ENST00000562616 TSPOAP1O95153 1857 aa13.71□□□□□ -0.22
CCP110-206ENST00000562616 GLI2P10070 1586 aa13.69□□□□□ -0.22
CCP110-206ENST00000562616 MAGI3Q5TCQ9 1506 aa13.68□□□□□ -0.22
CCP110-206ENST00000562616 STK25O00506 426 aa13.68□□□□□ -0.22
CCP110-206ENST00000562616 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
CCP110-206ENST00000562616 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
CCP110-206ENST00000562616 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
CCP110-206ENST00000562616 KIF14Q15058 1648 aa13.67□□□□□ -0.22
CCP110-206ENST00000562616 MAP3K4Q9Y6R4 1608 aa13.67□□□□□ -0.22
CCP110-206ENST00000562616 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
CCP110-206ENST00000562616 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
CCP110-206ENST00000562616 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
CCP110-206ENST00000562616 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
CCP110-206ENST00000562616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCP110-206ENST00000562616 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
CCP110-206ENST00000562616 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
CCP110-206ENST00000562616 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
CCP110-206ENST00000562616 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
CCP110-206ENST00000562616 EMP3P54852 163 aa13.63□□□□□ -0.23
CCP110-206ENST00000562616 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
CCP110-206ENST00000562616 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
CCP110-206ENST00000562616 MYO5CQ9NQX4 1742 aa13.6□□□□□ -0.23
CCP110-206ENST00000562616 NUBP1P53384 320 aa13.59□□□□□ -0.23
CCP110-206ENST00000562616 KRTAP3-3Q9BYR6 98 aa13.59□□□□□ -0.23
CCP110-206ENST00000562616 KRTAP3-2Q9BYR7 98 aa13.59□□□□□ -0.23
CCP110-206ENST00000562616 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.24
CCP110-206ENST00000562616 ADGRL1O94910 1474 aa13.57□□□□□ -0.24
CCP110-206ENST00000562616 TEX14Q8IWB6 1497 aa13.56□□□□□ -0.24
CCP110-206ENST00000562616 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
CCP110-206ENST00000562616 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
CCP110-206ENST00000562616 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
CCP110-206ENST00000562616 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
CCP110-206ENST00000562616 CDC42BPBQ9Y5S2 1711 aa13.54□□□□□ -0.24
CCP110-206ENST00000562616 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
CCP110-206ENST00000562616 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
CCP110-206ENST00000562616 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
CCP110-206ENST00000562616 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
CCP110-206ENST00000562616 PLCH2O75038 1416 aa13.53□□□□□ -0.24
CCP110-206ENST00000562616 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
CCP110-206ENST00000562616 ITSN2Q9NZM3 1697 aa13.52□□□□□ -0.24
CCP110-206ENST00000562616 FANCAO15360 1455 aa13.52□□□□□ -0.24
CCP110-206ENST00000562616 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
CCP110-206ENST00000562616 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.25
CCP110-206ENST00000562616 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms