RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
DENND4A-205ENST00000562540 KCNC4Q03721 635 aa10.13□□□□□ -0.79
DENND4A-205ENST00000562540 ZFRQ96KR1 1074 aaKnown RBP10.13□□□□□ -0.79
DENND4A-205ENST00000562540 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
DENND4A-205ENST00000562540 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
DENND4A-205ENST00000562540 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
DENND4A-205ENST00000562540 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
DENND4A-205ENST00000562540 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
DENND4A-205ENST00000562540 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
DENND4A-205ENST00000562540 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
DENND4A-205ENST00000562540 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
DENND4A-205ENST00000562540 LAPTM4AQ15012 233 aa10.08□□□□□ -0.8
DENND4A-205ENST00000562540 GFRA3O60609 400 aa10.07□□□□□ -0.8
DENND4A-205ENST00000562540 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
DENND4A-205ENST00000562540 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
DENND4A-205ENST00000562540 MFSD10Q14728 455 aa10.05□□□□□ -0.8
DENND4A-205ENST00000562540 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
DENND4A-205ENST00000562540 PHF14O94880 888 aa10.04□□□□□ -0.8
DENND4A-205ENST00000562540 ONECUT3O60422 494 aaPredicted RBP10.03□□□□□ -0.8
DENND4A-205ENST00000562540 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
DENND4A-205ENST00000562540 TSR3Q9UJK0 312 aaKnown RBP10.02□□□□□ -0.81
DENND4A-205ENST00000562540 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
DENND4A-205ENST00000562540 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
DENND4A-205ENST00000562540 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
DENND4A-205ENST00000562540 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.01□□□□□ -0.81
DENND4A-205ENST00000562540 LRCH3Q96II8 777 aa10□□□□□ -0.81
DENND4A-205ENST00000562540 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
DENND4A-205ENST00000562540 PRKD2Q9BZL6 878 aa9.97□□□□□ -0.81
DENND4A-205ENST00000562540 NRG2O14511 850 aaPredicted RBP9.96□□□□□ -0.82
DENND4A-205ENST00000562540 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
DENND4A-205ENST00000562540 EPAS1Q99814 870 aa9.94□□□□□ -0.82
DENND4A-205ENST00000562540 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
DENND4A-205ENST00000562540 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
DENND4A-205ENST00000562540 PPP4CP60510 307 aa9.9□□□□□ -0.82
DENND4A-205ENST00000562540 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
DENND4A-205ENST00000562540 DPYSL4O14531 572 aa9.88□□□□□ -0.83
DENND4A-205ENST00000562540 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
DENND4A-205ENST00000562540 ZNF787Q6DD87 383 aa9.88□□□□□ -0.83
DENND4A-205ENST00000562540 MTRQ99707 1265 aa9.88□□□□□ -0.83
DENND4A-205ENST00000562540 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
DENND4A-205ENST00000562540 DDX12PQ92771 950 aa9.87□□□□□ -0.83
DENND4A-205ENST00000562540 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
DENND4A-205ENST00000562540 SAMD7Q7Z3H4 446 aa9.86□□□□□ -0.83
DENND4A-205ENST00000562540 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
DENND4A-205ENST00000562540 IL21Q9HBE4 155 aa9.86□□□□□ -0.83
DENND4A-205ENST00000562540 SMAPO00193 183 aa9.85□□□□□ -0.83
DENND4A-205ENST00000562540 PACS2Q86VP3 889 aa9.85□□□□□ -0.83
DENND4A-205ENST00000562540 ZNF516Q92618 1163 aa9.85□□□□□ -0.83
DENND4A-205ENST00000562540 ZNF775Q96BV0 537 aaPredicted RBP9.85□□□□□ -0.83
DENND4A-205ENST00000562540 EN1Q05925 392 aaPredicted RBP9.83□□□□□ -0.84
DENND4A-205ENST00000562540 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
DENND4A-205ENST00000562540 PDZRN3Q9UPQ7 1066 aa9.83□□□□□ -0.84
DENND4A-205ENST00000562540 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
DENND4A-205ENST00000562540 FAM198AQ9UFP1 575 aa9.82□□□□□ -0.84
DENND4A-205ENST00000562540 NBR1Q14596 966 aa9.81□□□□□ -0.84
DENND4A-205ENST00000562540 MAP3K7O43318 606 aa9.8□□□□□ -0.84
DENND4A-205ENST00000562540 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
DENND4A-205ENST00000562540 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
DENND4A-205ENST00000562540 APLP1P51693 650 aa9.77□□□□□ -0.85
DENND4A-205ENST00000562540 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.85
DENND4A-205ENST00000562540 PRSS12P56730 875 aa9.76□□□□□ -0.85
DENND4A-205ENST00000562540 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
DENND4A-205ENST00000562540 PDIA6Q15084 440 aa9.75□□□□□ -0.85
DENND4A-205ENST00000562540 TATDN2Q93075 761 aa9.74□□□□□ -0.85
DENND4A-205ENST00000562540 RNF40O75150 1001 aa9.73□□□□□ -0.85
DENND4A-205ENST00000562540 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
DENND4A-205ENST00000562540 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
DENND4A-205ENST00000562540 PNMA3Q9UL41 463 aa9.73□□□□□ -0.85
DENND4A-205ENST00000562540 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
DENND4A-205ENST00000562540 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
DENND4A-205ENST00000562540 COPS2P61201 443 aa9.7□□□□□ -0.86
DENND4A-205ENST00000562540 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
DENND4A-205ENST00000562540 E2F4Q16254 413 aa9.69□□□□□ -0.86
DENND4A-205ENST00000562540 POTECB2RU33 542 aa9.68□□□□□ -0.86
DENND4A-205ENST00000562540 GGCXP38435 758 aa9.68□□□□□ -0.86
DENND4A-205ENST00000562540 NUDT18Q6ZVK8 323 aa9.68□□□□□ -0.86
DENND4A-205ENST00000562540 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
DENND4A-205ENST00000562540 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
DENND4A-205ENST00000562540 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
DENND4A-205ENST00000562540 MYT1Q01538 1121 aa9.67□□□□□ -0.86
DENND4A-205ENST00000562540 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
DENND4A-205ENST00000562540 CERKQ8TCT0 537 aa9.67□□□□□ -0.86
DENND4A-205ENST00000562540 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
DENND4A-205ENST00000562540 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
DENND4A-205ENST00000562540 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
DENND4A-205ENST00000562540 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
DENND4A-205ENST00000562540 PKDCCQ504Y2 493 aa9.63□□□□□ -0.87
DENND4A-205ENST00000562540 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
DENND4A-205ENST00000562540 ARIH1Q9Y4X5 557 aaPredicted RBP9.63□□□□□ -0.87
DENND4A-205ENST00000562540 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
DENND4A-205ENST00000562540 ZPR1O75312 459 aa9.62□□□□□ -0.87
DENND4A-205ENST00000562540 SLC19A1P41440 591 aa9.62□□□□□ -0.87
DENND4A-205ENST00000562540 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
DENND4A-205ENST00000562540 DGAT1O75907 488 aa9.6□□□□□ -0.87
DENND4A-205ENST00000562540 SPRYD7Q5W111 196 aa9.59□□□□□ -0.87
DENND4A-205ENST00000562540 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
DENND4A-205ENST00000562540 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
DENND4A-205ENST00000562540 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
DENND4A-205ENST00000562540 PRR20EP86478 221 aa9.57□□□□□ -0.88
DENND4A-205ENST00000562540 PRR20CP86479 221 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms