RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 HNRNPMP52272 730 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPAP1-204ENST00000562303 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 TPM3P06753 285 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 NACADO15069 1562 aa13.98□□□□□ -0.17
RPAP1-204ENST00000562303 C1orf141Q5JVX7 400 aa13.97□□□□□ -0.17
RPAP1-204ENST00000562303 GOLGA6L1Q8N7Z2 621 aa13.97□□□□□ -0.17
RPAP1-204ENST00000562303 ARID3AQ99856 593 aa13.97□□□□□ -0.17
RPAP1-204ENST00000562303 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
RPAP1-204ENST00000562303 PES1O00541 588 aaKnown RBP13.97□□□□□ -0.17
RPAP1-204ENST00000562303 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
RPAP1-204ENST00000562303 TRIM34Q9BYJ4 488 aa13.96□□□□□ -0.17
RPAP1-204ENST00000562303 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
RPAP1-204ENST00000562303 RAD21O60216 631 aa13.96□□□□□ -0.17
RPAP1-204ENST00000562303 TRAK1Q9UPV9 953 aa13.95□□□□□ -0.18
RPAP1-204ENST00000562303 AKAP17AQ02040 695 aaKnown RBP13.95□□□□□ -0.18
RPAP1-204ENST00000562303 TCEAL9Q9UHQ7 104 aa13.95□□□□□ -0.18
RPAP1-204ENST00000562303 WWC1Q8IX03 1113 aa13.95□□□□□ -0.18
RPAP1-204ENST00000562303 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
RPAP1-204ENST00000562303 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
RPAP1-204ENST00000562303 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
RPAP1-204ENST00000562303 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
RPAP1-204ENST00000562303 H3BQV1 296 aa13.93□□□□□ -0.18
RPAP1-204ENST00000562303 IFFO2Q5TF58 517 aa13.93□□□□□ -0.18
RPAP1-204ENST00000562303 ST18O60284 1047 aa13.93□□□□□ -0.18
RPAP1-204ENST00000562303 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
RPAP1-204ENST00000562303 FOXD4L5Q5VV16 416 aaPredicted RBP13.93□□□□□ -0.18
RPAP1-204ENST00000562303 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
RPAP1-204ENST00000562303 FOXD4L4Q8WXT5 416 aaPredicted RBP13.93□□□□□ -0.18
RPAP1-204ENST00000562303 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
RPAP1-204ENST00000562303 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
RPAP1-204ENST00000562303 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
RPAP1-204ENST00000562303 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
RPAP1-204ENST00000562303 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
RPAP1-204ENST00000562303 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 COG3Q96JB2 828 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 GOLGA6L3A6NEY3 463 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 SOGA1O94964 1423 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 TEFQ10587 303 aa13.91□□□□□ -0.18
RPAP1-204ENST00000562303 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
RPAP1-204ENST00000562303 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 PHF14O94880 888 aa13.9□□□□□ -0.18
RPAP1-204ENST00000562303 FBXW7Q969H0 707 aa13.9□□□□□ -0.18
RPAP1-204ENST00000562303 RBM19Q9Y4C8 960 aaKnown RBP13.9□□□□□ -0.18
RPAP1-204ENST00000562303 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
RPAP1-204ENST00000562303 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
RPAP1-204ENST00000562303 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
RPAP1-204ENST00000562303 TPM2P07951 284 aa13.89□□□□□ -0.19
RPAP1-204ENST00000562303 NEXNQ0ZGT2 675 aa13.89□□□□□ -0.19
RPAP1-204ENST00000562303 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
RPAP1-204ENST00000562303 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
RPAP1-204ENST00000562303 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
RPAP1-204ENST00000562303 NLRP13Q86W25 1043 aa13.88□□□□□ -0.19
RPAP1-204ENST00000562303 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
RPAP1-204ENST00000562303 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
RPAP1-204ENST00000562303 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
RPAP1-204ENST00000562303 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
RPAP1-204ENST00000562303 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
RPAP1-204ENST00000562303 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
RPAP1-204ENST00000562303 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
RPAP1-204ENST00000562303 RAB3GAP2Q9H2M9 1393 aa13.86□□□□□ -0.19
RPAP1-204ENST00000562303 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
RPAP1-204ENST00000562303 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
RPAP1-204ENST00000562303 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
RPAP1-204ENST00000562303 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
RPAP1-204ENST00000562303 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
RPAP1-204ENST00000562303 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
RPAP1-204ENST00000562303 APPP05067 770 aa13.84□□□□□ -0.19
RPAP1-204ENST00000562303 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
RPAP1-204ENST00000562303 TPM1P09493 284 aa13.84□□□□□ -0.19
RPAP1-204ENST00000562303 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
RPAP1-204ENST00000562303 TRIM29Q14134 588 aa13.84□□□□□ -0.19
RPAP1-204ENST00000562303 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
RPAP1-204ENST00000562303 GOLGA6L19H0YKK7 550 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-204ENST00000562303 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 PCMTD1Q96MG8 357 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-204ENST00000562303 PSME1Q06323 249 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-204ENST00000562303 BECN2A8MW95 431 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
RPAP1-204ENST00000562303 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
RPAP1-204ENST00000562303 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
RPAP1-204ENST00000562303 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
RPAP1-204ENST00000562303 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
RPAP1-204ENST00000562303 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
RPAP1-204ENST00000562303 ATP6V1DQ9Y5K8 247 aa13.81□□□□□ -0.2
RPAP1-204ENST00000562303 PANK3Q9H999 370 aa13.81□□□□□ -0.2
RPAP1-204ENST00000562303 NECTIN2Q92692 538 aa13.81□□□□□ -0.2
RPAP1-204ENST00000562303 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms