RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
GINS3-204ENST00000561952 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
GINS3-204ENST00000561952 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
GINS3-204ENST00000561952 APLP2Q06481 763 aa12.98□□□□□ -0.33
GINS3-204ENST00000561952 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
GINS3-204ENST00000561952 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
GINS3-204ENST00000561952 KIF3BO15066 747 aa12.97□□□□□ -0.33
GINS3-204ENST00000561952 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
GINS3-204ENST00000561952 CAMSAP1Q5T5Y3 1602 aa12.96□□□□□ -0.33
GINS3-204ENST00000561952 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
GINS3-204ENST00000561952 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
GINS3-204ENST00000561952 NPATQ14207 1427 aa12.96□□□□□ -0.34
GINS3-204ENST00000561952 ZNF142P52746 1687 aaPredicted RBP12.95□□□□□ -0.34
GINS3-204ENST00000561952 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
GINS3-204ENST00000561952 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
GINS3-204ENST00000561952 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
GINS3-204ENST00000561952 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
GINS3-204ENST00000561952 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
GINS3-204ENST00000561952 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
GINS3-204ENST00000561952 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
GINS3-204ENST00000561952 NCOA1Q15788 1441 aa12.92□□□□□ -0.34
GINS3-204ENST00000561952 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
GINS3-204ENST00000561952 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
GINS3-204ENST00000561952 CEP152O94986 1710 aa12.91□□□□□ -0.34
GINS3-204ENST00000561952 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
GINS3-204ENST00000561952 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
GINS3-204ENST00000561952 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
GINS3-204ENST00000561952 RNF17Q9BXT8 1623 aaKnown RBP12.9□□□□□ -0.34
GINS3-204ENST00000561952 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
GINS3-204ENST00000561952 PTPRTO14522 1441 aa12.88□□□□□ -0.35
GINS3-204ENST00000561952 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
GINS3-204ENST00000561952 PZPP20742 1482 aa12.88□□□□□ -0.35
GINS3-204ENST00000561952 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
GINS3-204ENST00000561952 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
GINS3-204ENST00000561952 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
GINS3-204ENST00000561952 TNRQ92752 1358 aa12.87□□□□□ -0.35
GINS3-204ENST00000561952 ABCC3O15438 1527 aa12.87□□□□□ -0.35
GINS3-204ENST00000561952 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
GINS3-204ENST00000561952 ABCC5O15440 1437 aa12.87□□□□□ -0.35
GINS3-204ENST00000561952 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
GINS3-204ENST00000561952 POLR1AO95602 1720 aaPredicted RBP12.86□□□□□ -0.35
GINS3-204ENST00000561952 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
GINS3-204ENST00000561952 MROH1Q8NDA8 1641 aa12.86□□□□□ -0.35
GINS3-204ENST00000561952 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
GINS3-204ENST00000561952 DAPK1P53355 1430 aa12.86□□□□□ -0.35
GINS3-204ENST00000561952 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
GINS3-204ENST00000561952 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
GINS3-204ENST00000561952 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
GINS3-204ENST00000561952 PLA2R1Q13018 1463 aa12.84□□□□□ -0.35
GINS3-204ENST00000561952 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
GINS3-204ENST00000561952 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
GINS3-204ENST00000561952 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
GINS3-204ENST00000561952 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
GINS3-204ENST00000561952 PKD2Q13563 968 aa12.81□□□□□ -0.36
GINS3-204ENST00000561952 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
GINS3-204ENST00000561952 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
GINS3-204ENST00000561952 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
GINS3-204ENST00000561952 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
GINS3-204ENST00000561952 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
GINS3-204ENST00000561952 SPATA31D1Q6ZQQ2 1576 aa12.8□□□□□ -0.36
GINS3-204ENST00000561952 NEURL4Q96JN8 1562 aa12.8□□□□□ -0.36
GINS3-204ENST00000561952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
GINS3-204ENST00000561952 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
GINS3-204ENST00000561952 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
GINS3-204ENST00000561952 DEPDC5O75140 1603 aa12.78□□□□□ -0.36
GINS3-204ENST00000561952 ANKRD30AQ9BXX3 1397 aa12.78□□□□□ -0.36
GINS3-204ENST00000561952 POTEHQ6S545 545 aa12.77□□□□□ -0.37
GINS3-204ENST00000561952 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
GINS3-204ENST00000561952 KANK1Q14678 1352 aa12.75□□□□□ -0.37
GINS3-204ENST00000561952 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
GINS3-204ENST00000561952 ANKLE2Q86XL3 938 aa12.74□□□□□ -0.37
GINS3-204ENST00000561952 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
GINS3-204ENST00000561952 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
GINS3-204ENST00000561952 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
GINS3-204ENST00000561952 NPHP4O75161 1426 aaPredicted RBP12.72□□□□□ -0.37
GINS3-204ENST00000561952 ITGAEP38570 1179 aa12.72□□□□□ -0.37
GINS3-204ENST00000561952 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
GINS3-204ENST00000561952 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.37
GINS3-204ENST00000561952 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
GINS3-204ENST00000561952 ARHGAP31Q2M1Z3 1444 aa12.7□□□□□ -0.38
GINS3-204ENST00000561952 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
GINS3-204ENST00000561952 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
GINS3-204ENST00000561952 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
GINS3-204ENST00000561952 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
GINS3-204ENST00000561952 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
GINS3-204ENST00000561952 SYNMO15061 1565 aa12.69□□□□□ -0.38
GINS3-204ENST00000561952 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
GINS3-204ENST00000561952 MED14O60244 1454 aa12.68□□□□□ -0.38
GINS3-204ENST00000561952 CAPN15O75808 1086 aa12.68□□□□□ -0.38
GINS3-204ENST00000561952 DSG3P32926 999 aa12.68□□□□□ -0.38
GINS3-204ENST00000561952 CPS1P31327 1500 aa12.67□□□□□ -0.38
GINS3-204ENST00000561952 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
GINS3-204ENST00000561952 MYO5BQ9ULV0 1848 aa12.66□□□□□ -0.38
GINS3-204ENST00000561952 UNC13BO14795 1591 aa12.65□□□□□ -0.38
GINS3-204ENST00000561952 TET3O43151 1660 aa12.65□□□□□ -0.38
GINS3-204ENST00000561952 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
GINS3-204ENST00000561952 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
GINS3-204ENST00000561952 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
GINS3-204ENST00000561952 ADGRB3O60242 1522 aa12.64□□□□□ -0.39
GINS3-204ENST00000561952 SLIT1O75093 1534 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms