RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
TUBGCP4-202ENST00000561691 CD109Q6YHK3 1445 aa14.54□□□□□ -0.08
TUBGCP4-202ENST00000561691 DEPDC5O75140 1603 aa14.53□□□□□ -0.08
TUBGCP4-202ENST00000561691 ATP10AO60312 1499 aa14.52□□□□□ -0.09
TUBGCP4-202ENST00000561691 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
TUBGCP4-202ENST00000561691 KIDINS220Q9ULH0 1771 aa14.51□□□□□ -0.09
TUBGCP4-202ENST00000561691 KDM5CP41229 1560 aa14.51□□□□□ -0.09
TUBGCP4-202ENST00000561691 UHRF1BP1Q6BDS2 1440 aa14.51□□□□□ -0.09
TUBGCP4-202ENST00000561691 SPATA31E1Q6ZUB1 1445 aa14.5□□□□□ -0.09
TUBGCP4-202ENST00000561691 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
TUBGCP4-202ENST00000561691 MROH1Q8NDA8 1641 aa14.49□□□□□ -0.09
TUBGCP4-202ENST00000561691 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
TUBGCP4-202ENST00000561691 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
TUBGCP4-202ENST00000561691 ZNF518AQ6AHZ1 1483 aa14.48□□□□□ -0.09
TUBGCP4-202ENST00000561691 CYB5RLQ6IPT4 315 aa14.48□□□□□ -0.09
TUBGCP4-202ENST00000561691 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
TUBGCP4-202ENST00000561691 GLI2P10070 1586 aa14.48□□□□□ -0.09
TUBGCP4-202ENST00000561691 DHX29Q7Z478 1369 aaKnown RBP14.48□□□□□ -0.09
TUBGCP4-202ENST00000561691 EIF2AK4Q9P2K8 1649 aaKnown RBP14.47□□□□□ -0.09
TUBGCP4-202ENST00000561691 NEO1Q92859 1461 aa14.47□□□□□ -0.09
TUBGCP4-202ENST00000561691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
TUBGCP4-202ENST00000561691 FRMPD1Q5SYB0 1578 aa14.46□□□□□ -0.09
TUBGCP4-202ENST00000561691 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.1
TUBGCP4-202ENST00000561691 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
TUBGCP4-202ENST00000561691 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
TUBGCP4-202ENST00000561691 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
TUBGCP4-202ENST00000561691 E9PCH4 1651 aa14.44□□□□□ -0.1
TUBGCP4-202ENST00000561691 PTPRTO14522 1441 aa14.43□□□□□ -0.1
TUBGCP4-202ENST00000561691 WASHC2AQ641Q2 1341 aa14.43□□□□□ -0.1
TUBGCP4-202ENST00000561691 RALGAPBQ86X10 1494 aa14.43□□□□□ -0.1
TUBGCP4-202ENST00000561691 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
TUBGCP4-202ENST00000561691 CCDC144AA2RUR9 1427 aa14.42□□□□□ -0.1
TUBGCP4-202ENST00000561691 C11orf95C9JLR9 678 aaPredicted RBP14.42□□□□□ -0.1
TUBGCP4-202ENST00000561691 A2MP01023 1474 aa14.42□□□□□ -0.1
TUBGCP4-202ENST00000561691 TET3O43151 1660 aa14.41□□□□□ -0.1
TUBGCP4-202ENST00000561691 DIP2BQ9P265 1576 aa14.41□□□□□ -0.1
TUBGCP4-202ENST00000561691 HECW2Q9P2P5 1572 aa14.41□□□□□ -0.1
TUBGCP4-202ENST00000561691 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
TUBGCP4-202ENST00000561691 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
TUBGCP4-202ENST00000561691 TRPM2O94759 1503 aa14.4□□□□□ -0.1
TUBGCP4-202ENST00000561691 BCORL1Q5H9F3 1711 aa14.39□□□□□ -0.11
TUBGCP4-202ENST00000561691 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
TUBGCP4-202ENST00000561691 LMTK2Q8IWU2 1503 aa14.39□□□□□ -0.11
TUBGCP4-202ENST00000561691 PRAG1Q86YV5 1406 aa14.38□□□□□ -0.11
TUBGCP4-202ENST00000561691 KIF3BO15066 747 aa14.37□□□□□ -0.11
TUBGCP4-202ENST00000561691 PPRC1Q5VV67 1664 aaKnown RBP14.37□□□□□ -0.11
TUBGCP4-202ENST00000561691 CCDC7Q96M83 1385 aa14.37□□□□□ -0.11
TUBGCP4-202ENST00000561691 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
TUBGCP4-202ENST00000561691 DIP2CQ9Y2E4 1556 aa14.36□□□□□ -0.11
TUBGCP4-202ENST00000561691 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 EFCAB6Q5THR3 1501 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 TRPM1Q7Z4N2 1603 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 USP47Q96K76 1375 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 DCAF11Q8TEB1 546 aa14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-202ENST00000561691 GPRASP1Q5JY77 1395 aa14.33□□□□□ -0.11
TUBGCP4-202ENST00000561691 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
TUBGCP4-202ENST00000561691 POLR1AO95602 1720 aaPredicted RBP14.32□□□□□ -0.12
TUBGCP4-202ENST00000561691 KANK1Q14678 1352 aa14.32□□□□□ -0.12
TUBGCP4-202ENST00000561691 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
TUBGCP4-202ENST00000561691 NEURL4Q96JN8 1562 aa14.32□□□□□ -0.12
TUBGCP4-202ENST00000561691 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 ZMYM4Q5VZL5 1548 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 CEP152O94986 1710 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 FAM69CQ0P6D2 419 aa14.31□□□□□ -0.12
TUBGCP4-202ENST00000561691 RGL3Q3MIN7 710 aa14.3□□□□□ -0.12
TUBGCP4-202ENST00000561691 CNTLNQ9NXG0 1405 aa14.3□□□□□ -0.12
TUBGCP4-202ENST00000561691 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
TUBGCP4-202ENST00000561691 ABCC3O15438 1527 aa14.29□□□□□ -0.12
TUBGCP4-202ENST00000561691 LAMC1P11047 1609 aa14.29□□□□□ -0.12
TUBGCP4-202ENST00000561691 UGGT1Q9NYU2 1555 aa14.29□□□□□ -0.12
TUBGCP4-202ENST00000561691 NPATQ14207 1427 aa14.28□□□□□ -0.12
TUBGCP4-202ENST00000561691 MADDQ8WXG6 1647 aa14.28□□□□□ -0.12
TUBGCP4-202ENST00000561691 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.12
TUBGCP4-202ENST00000561691 CARD11Q9BXL7 1154 aa14.27□□□□□ -0.13
TUBGCP4-202ENST00000561691 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
TUBGCP4-202ENST00000561691 CCER2I3L3R5 266 aa14.25□□□□□ -0.13
TUBGCP4-202ENST00000561691 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
TUBGCP4-202ENST00000561691 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
TUBGCP4-202ENST00000561691 COL17A1Q9UMD9 1497 aaPredicted RBP14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 NOS1P29475 1434 aa14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 ANP32CO43423 234 aa14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 SIGLEC1Q9BZZ2 1709 aa14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 ARID4BQ4LE39 1312 aaPredicted RBP14.23□□□□□ -0.13
TUBGCP4-202ENST00000561691 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
TUBGCP4-202ENST00000561691 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
TUBGCP4-202ENST00000561691 ADGRB3O60242 1522 aa14.22□□□□□ -0.13
TUBGCP4-202ENST00000561691 TSPOAP1O95153 1857 aa14.21□□□□□ -0.13
TUBGCP4-202ENST00000561691 REREQ9P2R6 1566 aa14.21□□□□□ -0.13
TUBGCP4-202ENST00000561691 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
TUBGCP4-202ENST00000561691 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.13
TUBGCP4-202ENST00000561691 GGT6Q6P531 493 aa14.21□□□□□ -0.14
TUBGCP4-202ENST00000561691 MYOM2P54296 1465 aa14.2□□□□□ -0.14
TUBGCP4-202ENST00000561691 NRXN1Q9ULB1 1477 aa14.2□□□□□ -0.14
TUBGCP4-202ENST00000561691 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
TUBGCP4-202ENST00000561691 TESK2Q96S53 571 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms