RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 WASHC2CQ9Y4E1 1318 aa36.85■■■■□ 3.49
CDR2-202ENST00000561630 DUOX2Q9NRD8 1548 aa36.85■■■■□ 3.49
CDR2-202ENST00000561630 KIF15Q9NS87 1388 aa36.85■■■■□ 3.49
CDR2-202ENST00000561630 KDM5DQ9BY66 1539 aa36.85■■■■□ 3.49
CDR2-202ENST00000561630 FAM50AQ14320 339 aaKnown RBP36.82■■■■□ 3.48
CDR2-202ENST00000561630 RRP7BPQ9NSQ0 103 aa36.82■■■■□ 3.48
CDR2-202ENST00000561630 EIF2AK4Q9P2K8 1649 aaKnown RBP36.81■■■■□ 3.48
CDR2-202ENST00000561630 RNF17Q9BXT8 1623 aaKnown RBP36.8■■■■□ 3.48
CDR2-202ENST00000561630 CHIC2Q9UKJ5 165 aa36.78■■■■□ 3.48
CDR2-202ENST00000561630 ANKRD30AQ9BXX3 1397 aa36.77■■■■□ 3.48
CDR2-202ENST00000561630 ERBINQ96RT1 1412 aa36.76■■■■□ 3.47
CDR2-202ENST00000561630 NCOA1Q15788 1441 aa36.73■■■■□ 3.47
CDR2-202ENST00000561630 PZPP20742 1482 aa36.73■■■■□ 3.47
CDR2-202ENST00000561630 PPARGC1BQ86YN6 1023 aaKnown RBP36.72■■■■□ 3.47
CDR2-202ENST00000561630 FBXO31Q5XUX0 539 aaPredicted RBP36.7■■■■□ 3.47
CDR2-202ENST00000561630 MROH1Q8NDA8 1641 aa36.69■■■■□ 3.46
CDR2-202ENST00000561630 ABCC3O15438 1527 aa36.69■■■■□ 3.46
CDR2-202ENST00000561630 ADGRL2O95490 1459 aa36.69■■■■□ 3.46
CDR2-202ENST00000561630 DMRT2Q9Y5R5 561 aa36.66■■■■□ 3.46
CDR2-202ENST00000561630 MYO3AQ8NEV4 1616 aa36.66■■■■□ 3.46
CDR2-202ENST00000561630 TNRQ92752 1358 aa36.65■■■■□ 3.46
CDR2-202ENST00000561630 ZC3H13Q5T200 1668 aaKnown RBP36.63■■■■□ 3.45
CDR2-202ENST00000561630 STRCQ7RTU9 1775 aa36.63■■■■□ 3.45
CDR2-202ENST00000561630 CEP170BQ9Y4F5 1589 aaPredicted RBP36.61■■■■□ 3.45
CDR2-202ENST00000561630 PRDM15P57071 1507 aaPredicted RBP36.6■■■■□ 3.45
CDR2-202ENST00000561630 ZNF142P52746 1687 aaPredicted RBP36.6■■■■□ 3.45
CDR2-202ENST00000561630 A2ML1A8K2U0 1454 aa36.58■■■■□ 3.45
CDR2-202ENST00000561630 CAMSAP1Q5T5Y3 1602 aa36.58■■■■□ 3.45
CDR2-202ENST00000561630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.56■■■■□ 3.44
CDR2-202ENST00000561630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.56■■■■□ 3.445e-8■■■□□ 18
CDR2-202ENST00000561630 PTPRTO14522 1441 aa36.54■■■■□ 3.44
CDR2-202ENST00000561630 DEPDC5O75140 1603 aa36.54■■■■□ 3.44
CDR2-202ENST00000561630 PLA2R1Q13018 1463 aa36.52■■■■□ 3.44
CDR2-202ENST00000561630 KANK1Q14678 1352 aa36.52■■■■□ 3.44
CDR2-202ENST00000561630 ILDR1Q86SU0 546 aaPredicted RBP36.51■■■■□ 3.44
CDR2-202ENST00000561630 ANKRD50Q9ULJ7 1429 aa36.51■■■■□ 3.43
CDR2-202ENST00000561630 NLRP1Q9C000 1473 aa36.5■■■■□ 3.43
CDR2-202ENST00000561630 ROCK1Q13464 1354 aa36.49■■■■□ 3.43
CDR2-202ENST00000561630 ARHGAP31Q2M1Z3 1444 aa36.49■■■■□ 3.43
CDR2-202ENST00000561630 SPATA31D1Q6ZQQ2 1576 aa36.49■■■■□ 3.43
CDR2-202ENST00000561630 CEP152O94986 1710 aa36.48■■■■□ 3.43
CDR2-202ENST00000561630 ERVK-7P63135 1459 aa36.48■■■■□ 3.43
CDR2-202ENST00000561630 NCKAP5LQ9HCH0 1330 aa36.46■■■■□ 3.43
CDR2-202ENST00000561630 PKD2Q13563 968 aa36.46■■■■□ 3.43
CDR2-202ENST00000561630 VWDEQ8N2E2 1590 aa36.44■■■■□ 3.42
CDR2-202ENST00000561630 LMTK2Q8IWU2 1503 aa36.42■■■■□ 3.42
CDR2-202ENST00000561630 ITGAEP38570 1179 aa36.41■■■■□ 3.42
CDR2-202ENST00000561630 RRBP1Q9P2E9 1410 aaKnown RBP36.41■■■■□ 3.42
CDR2-202ENST00000561630 THEMISQ8N1K5 641 aaPredicted RBP36.39■■■■□ 3.42
CDR2-202ENST00000561630 UGGT1Q9NYU2 1555 aa36.36■■■■□ 3.41
CDR2-202ENST00000561630 CERKQ8TCT0 537 aa36.36■■■■□ 3.41
CDR2-202ENST00000561630 FBXO41Q8TF61 875 aa36.36■■■■□ 3.41
CDR2-202ENST00000561630 ANKLE2Q86XL3 938 aa36.28■■■■□ 3.4
CDR2-202ENST00000561630 EFCAB6Q5THR3 1501 aa36.28■■■■□ 3.4
CDR2-202ENST00000561630 UNC13BO14795 1591 aa36.23■■■■□ 3.39
CDR2-202ENST00000561630 CFAP65Q6ZU64 1925 aaKnown RBP36.22■■■■□ 3.39
CDR2-202ENST00000561630 NOS1P29475 1434 aa36.21■■■■□ 3.39
CDR2-202ENST00000561630 LTBP4Q8N2S1 1624 aa36.2■■■■□ 3.39
CDR2-202ENST00000561630 NEURL4Q96JN8 1562 aa36.2■■■■□ 3.39
CDR2-202ENST00000561630 RPRD2Q5VT52 1461 aaKnown RBP36.19■■■■□ 3.38
CDR2-202ENST00000561630 ZNF335Q9H4Z2 1342 aaPredicted RBP36.16■■■■□ 3.38
CDR2-202ENST00000561630 POLR1AO95602 1720 aaPredicted RBP36.16■■■■□ 3.38
CDR2-202ENST00000561630 MED14O60244 1454 aa36.16■■■■□ 3.38
CDR2-202ENST00000561630 UBR1Q8IWV7 1749 aa36.15■■■■□ 3.38
CDR2-202ENST00000561630 IDI1Q13907 227 aa36.15■■■■□ 3.38
CDR2-202ENST00000561630 TET3O43151 1660 aa36.15■■■■□ 3.38
CDR2-202ENST00000561630 NUP155O75694 1391 aa36.14■■■■□ 3.38
CDR2-202ENST00000561630 SYNMO15061 1565 aa36.13■■■■□ 3.37
CDR2-202ENST00000561630 NPHP4O75161 1426 aaPredicted RBP36.12■■■■□ 3.37
CDR2-202ENST00000561630 SLC52A1Q9NWF4 448 aa36.11■■■■□ 3.37
CDR2-202ENST00000561630 PIK3C2BO00750 1634 aa36.09■■■■□ 3.37
CDR2-202ENST00000561630 IQGAP3Q86VI3 1631 aa36.09■■■■□ 3.37
CDR2-202ENST00000561630 STAG3Q9UJ98 1225 aa36.09■■■■□ 3.37
CDR2-202ENST00000561630 ARHGAP23Q9P227 1491 aa36.09■■■■□ 3.37
CDR2-202ENST00000561630 SLIT1O75093 1534 aa36.08■■■■□ 3.37
CDR2-202ENST00000561630 NAIPQ13075 1403 aa36.08■■■■□ 3.37
CDR2-202ENST00000561630 GCC2Q8IWJ2 1684 aa36.05■■■■□ 3.36
CDR2-202ENST00000561630 SCAF11Q99590 1463 aaKnown RBP36.05■■■■□ 3.36
CDR2-202ENST00000561630 TMEM2Q9UHN6 1383 aa36.04■■■■□ 3.36
CDR2-202ENST00000561630 LTKP29376 864 aa36.04■■■■□ 3.36
CDR2-202ENST00000561630 TXNDC2Q86VQ3 553 aa36.03■■■■□ 3.36
CDR2-202ENST00000561630 IQSEC2Q5JU85 1478 aa36.02■■■■□ 3.36
CDR2-202ENST00000561630 KDM5AP29375 1690 aaKnown RBP36.02■■■■□ 3.36
CDR2-202ENST00000561630 EID1Q9Y6B2 187 aa36.01■■■■□ 3.36
CDR2-202ENST00000561630 HFM1A2PYH4 1435 aa36■■■■□ 3.35
CDR2-202ENST00000561630 IQGAP1P46940 1657 aa35.99■■■■□ 3.35
CDR2-202ENST00000561630 E9PCH4 1651 aa35.98■■■■□ 3.35
CDR2-202ENST00000561630 ADGRB3O60242 1522 aa35.98■■■■□ 3.35
CDR2-202ENST00000561630 CPS1P31327 1500 aa35.9■■■■□ 3.34
CDR2-202ENST00000561630 TMEM131LA2VDJ0 1609 aa35.83■■■■□ 3.33
CDR2-202ENST00000561630 ZFYVE9O95405 1425 aa35.81■■■■□ 3.32
CDR2-202ENST00000561630 CHGAP10645 457 aaKnown RBP35.8■■■■□ 3.32
CDR2-202ENST00000561630 TRIM52Q96A61 297 aa35.8■■■■□ 3.32
CDR2-202ENST00000561630 HDGFP51858 240 aaKnown RBP35.78■■■■□ 3.32
CDR2-202ENST00000561630 RIMS2Q9UQ26 1411 aa35.77■■■■□ 3.32
CDR2-202ENST00000561630 UBAP1LF5GYI3 381 aa35.75■■■■□ 3.31
CDR2-202ENST00000561630 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.72■■■■□ 3.31
CDR2-202ENST00000561630 PPP1R15AO75807 674 aaPredicted RBP35.71■■■■□ 3.31
CDR2-202ENST00000561630 SLC26A8Q96RN1 970 aa35.71■■■■□ 3.31
CDR2-202ENST00000561630 SPHKAPQ2M3C7 1700 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms