RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CROCC2H7BZ55 1655 aa32.02■■■□□ 2.72
TPM1-232ENST00000561425 WASHC2CQ9Y4E1 1318 aa32■■■□□ 2.71
TPM1-232ENST00000561425 KDM5DQ9BY66 1539 aa32■■■□□ 2.71
TPM1-232ENST00000561425 RNF17Q9BXT8 1623 aaKnown RBP32■■■□□ 2.71
TPM1-232ENST00000561425 EIF2AK4Q9P2K8 1649 aaKnown RBP32■■■□□ 2.71
TPM1-232ENST00000561425 KIF15Q9NS87 1388 aa32■■■□□ 2.71
TPM1-232ENST00000561425 RRP7BPQ9NSQ0 103 aa31.98■■■□□ 2.71
TPM1-232ENST00000561425 NCOA1Q15788 1441 aa31.96■■■□□ 2.71
TPM1-232ENST00000561425 ERBINQ96RT1 1412 aa31.95■■■□□ 2.71
TPM1-232ENST00000561425 PZPP20742 1482 aa31.94■■■□□ 2.7
TPM1-232ENST00000561425 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
TPM1-232ENST00000561425 MROH1Q8NDA8 1641 aa31.93■■■□□ 2.7
TPM1-232ENST00000561425 ADGRL2O95490 1459 aa31.92■■■□□ 2.7
TPM1-232ENST00000561425 FAM50AQ14320 339 aaKnown RBP31.92■■■□□ 2.7
TPM1-232ENST00000561425 FBXO31Q5XUX0 539 aaPredicted RBP31.91■■■□□ 2.7
TPM1-232ENST00000561425 CHIC2Q9UKJ5 165 aa31.91■■■□□ 2.7
TPM1-232ENST00000561425 ABCC3O15438 1527 aa31.9■■■□□ 2.7
TPM1-232ENST00000561425 STRCQ7RTU9 1775 aa31.89■■■□□ 2.7
TPM1-232ENST00000561425 DMRT2Q9Y5R5 561 aa31.88■■■□□ 2.69
TPM1-232ENST00000561425 MYO3AQ8NEV4 1616 aa31.85■■■□□ 2.69
TPM1-232ENST00000561425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.84■■■□□ 2.691e-7■■□□□ 13.6
TPM1-232ENST00000561425 TNRQ92752 1358 aa31.83■■■□□ 2.69
TPM1-232ENST00000561425 ZNF142P52746 1687 aaPredicted RBP31.83■■■□□ 2.69
TPM1-232ENST00000561425 ZC3H13Q5T200 1668 aaKnown RBP31.83■■■□□ 2.69
TPM1-232ENST00000561425 PRDM15P57071 1507 aaPredicted RBP31.82■■■□□ 2.68
TPM1-232ENST00000561425 PPARGC1BQ86YN6 1023 aaKnown RBP31.82■■■□□ 2.68
TPM1-232ENST00000561425 PTPRTO14522 1441 aa31.82■■■□□ 2.68
TPM1-232ENST00000561425 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
TPM1-232ENST00000561425 A2ML1A8K2U0 1454 aa31.81■■■□□ 2.68
TPM1-232ENST00000561425 DEPDC5O75140 1603 aa31.78■■■□□ 2.68
TPM1-232ENST00000561425 CAMSAP1Q5T5Y3 1602 aa31.78■■■□□ 2.68
TPM1-232ENST00000561425 PLA2R1Q13018 1463 aa31.78■■■□□ 2.68
TPM1-232ENST00000561425 ARHGAP31Q2M1Z3 1444 aa31.77■■■□□ 2.68
TPM1-232ENST00000561425 ILDR1Q86SU0 546 aaPredicted RBP31.76■■■□□ 2.67
TPM1-232ENST00000561425 SPATA31D1Q6ZQQ2 1576 aa31.75■■■□□ 2.67
TPM1-232ENST00000561425 ROCK1Q13464 1354 aa31.74■■■□□ 2.67
TPM1-232ENST00000561425 VWDEQ8N2E2 1590 aa31.73■■■□□ 2.67
TPM1-232ENST00000561425 NLRP1Q9C000 1473 aa31.73■■■□□ 2.67
TPM1-232ENST00000561425 PKD2Q13563 968 aa31.73■■■□□ 2.67
TPM1-232ENST00000561425 ANKRD50Q9ULJ7 1429 aa31.72■■■□□ 2.67
TPM1-232ENST00000561425 ERVK-7P63135 1459 aa31.72■■■□□ 2.67
TPM1-232ENST00000561425 LMTK2Q8IWU2 1503 aa31.7■■■□□ 2.67
TPM1-232ENST00000561425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.7■■■□□ 2.676e-7■□□□□ 10.8
TPM1-232ENST00000561425 KANK1Q14678 1352 aa31.69■■■□□ 2.66
TPM1-232ENST00000561425 CEP152O94986 1710 aa31.69■■■□□ 2.66
TPM1-232ENST00000561425 NCKAP5LQ9HCH0 1330 aa31.69■■■□□ 2.66
TPM1-232ENST00000561425 RRBP1Q9P2E9 1410 aaKnown RBP31.67■■■□□ 2.66
TPM1-232ENST00000561425 THEMISQ8N1K5 641 aaPredicted RBP31.63■■■□□ 2.65
TPM1-232ENST00000561425 CERKQ8TCT0 537 aa31.63■■■□□ 2.65
TPM1-232ENST00000561425 FBXO41Q8TF61 875 aa31.63■■■□□ 2.65
TPM1-232ENST00000561425 UGGT1Q9NYU2 1555 aa31.6■■■□□ 2.65
TPM1-232ENST00000561425 ITGAEP38570 1179 aa31.55■■■□□ 2.64
TPM1-232ENST00000561425 LTBP4Q8N2S1 1624 aa31.53■■■□□ 2.64
TPM1-232ENST00000561425 ANKLE2Q86XL3 938 aa31.53■■■□□ 2.64
TPM1-232ENST00000561425 NOS1P29475 1434 aa31.52■■■□□ 2.64
TPM1-232ENST00000561425 EFCAB6Q5THR3 1501 aa31.52■■■□□ 2.64
TPM1-232ENST00000561425 UNC13BO14795 1591 aa31.51■■■□□ 2.63
TPM1-232ENST00000561425 NEURL4Q96JN8 1562 aa31.5■■■□□ 2.63
TPM1-232ENST00000561425 MED14O60244 1454 aa31.48■■■□□ 2.63
TPM1-232ENST00000561425 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
TPM1-232ENST00000561425 CFAP65Q6ZU64 1925 aaKnown RBP31.48■■■□□ 2.63
TPM1-232ENST00000561425 IDI1Q13907 227 aa31.45■■■□□ 2.63
TPM1-232ENST00000561425 UBR1Q8IWV7 1749 aa31.44■■■□□ 2.62
TPM1-232ENST00000561425 ARHGAP23Q9P227 1491 aa31.43■■■□□ 2.62
TPM1-232ENST00000561425 ZNF335Q9H4Z2 1342 aaPredicted RBP31.43■■■□□ 2.62
TPM1-232ENST00000561425 TET3O43151 1660 aa31.42■■■□□ 2.62
TPM1-232ENST00000561425 POLR1AO95602 1720 aaPredicted RBP31.42■■■□□ 2.62
TPM1-232ENST00000561425 SYNMO15061 1565 aa31.42■■■□□ 2.62
TPM1-232ENST00000561425 SLC52A1Q9NWF4 448 aa31.41■■■□□ 2.62
TPM1-232ENST00000561425 SLIT1O75093 1534 aa31.4■■■□□ 2.62
TPM1-232ENST00000561425 NPHP4O75161 1426 aaPredicted RBP31.4■■■□□ 2.62
TPM1-232ENST00000561425 NUP155O75694 1391 aa31.38■■■□□ 2.61
TPM1-232ENST00000561425 NAIPQ13075 1403 aa31.37■■■□□ 2.61
TPM1-232ENST00000561425 IQSEC2Q5JU85 1478 aa31.37■■■□□ 2.61
TPM1-232ENST00000561425 PIK3C2BO00750 1634 aa31.37■■■□□ 2.61
TPM1-232ENST00000561425 IQGAP3Q86VI3 1631 aa31.37■■■□□ 2.61
TPM1-232ENST00000561425 KDM5AP29375 1690 aaKnown RBP31.36■■■□□ 2.61
TPM1-232ENST00000561425 LTKP29376 864 aa31.36■■■□□ 2.61
TPM1-232ENST00000561425 TMEM2Q9UHN6 1383 aa31.34■■■□□ 2.61
TPM1-232ENST00000561425 GCC2Q8IWJ2 1684 aa31.34■■■□□ 2.61
TPM1-232ENST00000561425 SCAF11Q99590 1463 aaKnown RBP31.33■■■□□ 2.61
TPM1-232ENST00000561425 TXNDC2Q86VQ3 553 aa31.32■■■□□ 2.6
TPM1-232ENST00000561425 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
TPM1-232ENST00000561425 STAG3Q9UJ98 1225 aa31.28■■■□□ 2.6
TPM1-232ENST00000561425 E9PCH4 1651 aa31.28■■■□□ 2.6
TPM1-232ENST00000561425 IQGAP1P46940 1657 aa31.27■■■□□ 2.6
TPM1-232ENST00000561425 EID1Q9Y6B2 187 aa31.26■■■□□ 2.59
TPM1-232ENST00000561425 ADGRB3O60242 1522 aa31.25■■■□□ 2.59
TPM1-232ENST00000561425 CPS1P31327 1500 aa31.22■■■□□ 2.59
TPM1-232ENST00000561425 TMEM131LA2VDJ0 1609 aa31.16■■■□□ 2.58
TPM1-232ENST00000561425 ZFYVE9O95405 1425 aa31.16■■■□□ 2.58
TPM1-232ENST00000561425 HDGFP51858 240 aaKnown RBP31.09■■■□□ 2.57
TPM1-232ENST00000561425 RIMS2Q9UQ26 1411 aa31.07■■■□□ 2.57
TPM1-232ENST00000561425 STRCP1A6NGW2 1772 aa31.07■■■□□ 2.56
TPM1-232ENST00000561425 PLEKHG1Q9ULL1 1385 aa31.05■■■□□ 2.56
TPM1-232ENST00000561425 LRRC7Q96NW7 1537 aa31.04■■■□□ 2.56
TPM1-232ENST00000561425 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.04■■■□□ 2.56
TPM1-232ENST00000561425 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
TPM1-232ENST00000561425 MYO5BQ9ULV0 1848 aa31.03■■■□□ 2.56
TPM1-232ENST00000561425 UBAP1LF5GYI3 381 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms