RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 SRPK2P78362 688 aaKnown RBP21.68■■□□□ 1.06
AP4E1-205ENST00000561393 MAGI3Q5TCQ9 1506 aa21.67■■□□□ 1.06
AP4E1-205ENST00000561393 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
AP4E1-205ENST00000561393 PPM1GO15355 546 aaPredicted RBP21.66■■□□□ 1.06
AP4E1-205ENST00000561393 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
AP4E1-205ENST00000561393 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.05
AP4E1-205ENST00000561393 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
AP4E1-205ENST00000561393 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
AP4E1-205ENST00000561393 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
AP4E1-205ENST00000561393 TCOF1Q13428 1488 aaKnown RBP21.63■■□□□ 1.05
AP4E1-205ENST00000561393 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
AP4E1-205ENST00000561393 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
AP4E1-205ENST00000561393 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
AP4E1-205ENST00000561393 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
AP4E1-205ENST00000561393 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
AP4E1-205ENST00000561393 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
AP4E1-205ENST00000561393 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
AP4E1-205ENST00000561393 PPP4R2Q9NY27 417 aa21.58■■□□□ 1.05
AP4E1-205ENST00000561393 RPRD2Q5VT52 1461 aaKnown RBP21.57■■□□□ 1.04
AP4E1-205ENST00000561393 MYBBP1AQ9BQG0 1328 aaKnown RBP21.56■■□□□ 1.04
AP4E1-205ENST00000561393 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
AP4E1-205ENST00000561393 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
AP4E1-205ENST00000561393 PLEKHG5O94827 1062 aa21.54■■□□□ 1.04
AP4E1-205ENST00000561393 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
AP4E1-205ENST00000561393 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
AP4E1-205ENST00000561393 TMEM132EQ6IEE7 984 aa21.5■■□□□ 1.03
AP4E1-205ENST00000561393 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
AP4E1-205ENST00000561393 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
AP4E1-205ENST00000561393 C14orf37Q86TY3 774 aa21.47■■□□□ 1.03
AP4E1-205ENST00000561393 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
AP4E1-205ENST00000561393 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.03
AP4E1-205ENST00000561393 CD109Q6YHK3 1445 aa21.45■■□□□ 1.02
AP4E1-205ENST00000561393 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
AP4E1-205ENST00000561393 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
AP4E1-205ENST00000561393 ADGRL1O94910 1474 aa21.45■■□□□ 1.02
AP4E1-205ENST00000561393 SYCP2Q9BX26 1530 aa21.44■■□□□ 1.02
AP4E1-205ENST00000561393 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
AP4E1-205ENST00000561393 PLCH2O75038 1416 aa21.44■■□□□ 1.02
AP4E1-205ENST00000561393 FANCAO15360 1455 aa21.42■■□□□ 1.02
AP4E1-205ENST00000561393 RCAN3Q9UKA8 241 aa21.42■■□□□ 1.02
AP4E1-205ENST00000561393 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
AP4E1-205ENST00000561393 SOX12O15370 315 aa21.41■■□□□ 1.02
AP4E1-205ENST00000561393 ZBTB47Q9UFB7 747 aaPredicted RBP21.41■■□□□ 1.02
AP4E1-205ENST00000561393 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
AP4E1-205ENST00000561393 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
AP4E1-205ENST00000561393 HDGFL2Q7Z4V5 671 aaPredicted RBP21.39■■□□□ 1.02
AP4E1-205ENST00000561393 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.02
AP4E1-205ENST00000561393 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.02
AP4E1-205ENST00000561393 U2AF1L5P0DN76 240 aaPredicted RBP21.39■■□□□ 1.01
AP4E1-205ENST00000561393 U2AF1Q01081 240 aaKnown RBP eCLIP21.39■■□□□ 1.01
AP4E1-205ENST00000561393 RTL5Q5HYW3 569 aaPredicted RBP21.39■■□□□ 1.01
AP4E1-205ENST00000561393 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.01
AP4E1-205ENST00000561393 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.01
AP4E1-205ENST00000561393 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
AP4E1-205ENST00000561393 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
AP4E1-205ENST00000561393 ASXL2Q76L83 1435 aa21.36■■□□□ 1.01
AP4E1-205ENST00000561393 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
AP4E1-205ENST00000561393 PZPP20742 1482 aa21.34■■□□□ 1.01
AP4E1-205ENST00000561393 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
AP4E1-205ENST00000561393 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
AP4E1-205ENST00000561393 ERBINQ96RT1 1412 aa21.32■■□□□ 1
AP4E1-205ENST00000561393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.32■■□□□ 1
AP4E1-205ENST00000561393 GOLGA2Q08379 1002 aa21.3■■□□□ 1
AP4E1-205ENST00000561393 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
AP4E1-205ENST00000561393 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
AP4E1-205ENST00000561393 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
AP4E1-205ENST00000561393 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
AP4E1-205ENST00000561393 PDE3BQ13370 1112 aa21.28■■□□□ 1
AP4E1-205ENST00000561393 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
AP4E1-205ENST00000561393 KDM6BO15054 1643 aa21.28■■□□□ 1
AP4E1-205ENST00000561393 ABCA8O94911 1581 aa21.28■■□□□ 1
AP4E1-205ENST00000561393 CABP2Q9NPB3 220 aa21.27■■□□□ 1
AP4E1-205ENST00000561393 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
AP4E1-205ENST00000561393 APAF1O14727 1248 aa21.26■□□□□ 0.99
AP4E1-205ENST00000561393 SHANK2Q9UPX8 1470 aa21.26■□□□□ 0.99
AP4E1-205ENST00000561393 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
AP4E1-205ENST00000561393 FAM135AQ9P2D6 1515 aa21.26■□□□□ 0.99
AP4E1-205ENST00000561393 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
AP4E1-205ENST00000561393 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
AP4E1-205ENST00000561393 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
AP4E1-205ENST00000561393 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
AP4E1-205ENST00000561393 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
AP4E1-205ENST00000561393 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
AP4E1-205ENST00000561393 RBM19Q9Y4C8 960 aaKnown RBP21.25■□□□□ 0.99
AP4E1-205ENST00000561393 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
AP4E1-205ENST00000561393 PLIN1O60240 522 aa21.24■□□□□ 0.99
AP4E1-205ENST00000561393 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
AP4E1-205ENST00000561393 RGS3P49796 1198 aa21.24■□□□□ 0.99
AP4E1-205ENST00000561393 EID1Q9Y6B2 187 aa21.23■□□□□ 0.99
AP4E1-205ENST00000561393 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
AP4E1-205ENST00000561393 SLC52A1Q9NWF4 448 aa21.21■□□□□ 0.99
AP4E1-205ENST00000561393 PPP2R1AP30153 589 aa21.21■□□□□ 0.99
AP4E1-205ENST00000561393 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
AP4E1-205ENST00000561393 MBD5Q9P267 1494 aa21.18■□□□□ 0.98
AP4E1-205ENST00000561393 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
AP4E1-205ENST00000561393 GGNBP2Q9H3C7 697 aa21.18■□□□□ 0.98
AP4E1-205ENST00000561393 GCC2Q8IWJ2 1684 aa21.17■□□□□ 0.98
AP4E1-205ENST00000561393 IDI1Q13907 227 aa21.17■□□□□ 0.98
AP4E1-205ENST00000561393 PNNQ9H307 717 aaKnown RBP21.17■□□□□ 0.98
AP4E1-205ENST00000561393 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms