RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
CARMIL3-204ENST00000561354 ILDR2Q71H61 639 aa18.89■□□□□ 0.61
CARMIL3-204ENST00000561354 PZPP20742 1482 aa18.89■□□□□ 0.61
CARMIL3-204ENST00000561354 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
CARMIL3-204ENST00000561354 FBXO31Q5XUX0 539 aaPredicted RBP18.88■□□□□ 0.61
CARMIL3-204ENST00000561354 TNRQ92752 1358 aa18.88■□□□□ 0.61
CARMIL3-204ENST00000561354 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
CARMIL3-204ENST00000561354 WASHC2CQ9Y4E1 1318 aa18.87■□□□□ 0.61
CARMIL3-204ENST00000561354 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
CARMIL3-204ENST00000561354 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
CARMIL3-204ENST00000561354 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
CARMIL3-204ENST00000561354 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
CARMIL3-204ENST00000561354 SOCS7O14512 581 aa18.83■□□□□ 0.6
CARMIL3-204ENST00000561354 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.6
CARMIL3-204ENST00000561354 MIA2Q96PC5 1412 aa18.83■□□□□ 0.6
CARMIL3-204ENST00000561354 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
CARMIL3-204ENST00000561354 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
CARMIL3-204ENST00000561354 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
CARMIL3-204ENST00000561354 NLRP1Q9C000 1473 aa18.81■□□□□ 0.6
CARMIL3-204ENST00000561354 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
CARMIL3-204ENST00000561354 ANKLE2Q86XL3 938 aa18.8■□□□□ 0.6
CARMIL3-204ENST00000561354 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
CARMIL3-204ENST00000561354 CPS1P31327 1500 aa18.79■□□□□ 0.6
CARMIL3-204ENST00000561354 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
CARMIL3-204ENST00000561354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
CARMIL3-204ENST00000561354 RNF17Q9BXT8 1623 aaKnown RBP18.77■□□□□ 0.6
CARMIL3-204ENST00000561354 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.59
CARMIL3-204ENST00000561354 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
CARMIL3-204ENST00000561354 MED14O60244 1454 aa18.75■□□□□ 0.59
CARMIL3-204ENST00000561354 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
CARMIL3-204ENST00000561354 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
CARMIL3-204ENST00000561354 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
CARMIL3-204ENST00000561354 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
CARMIL3-204ENST00000561354 ABCC3O15438 1527 aa18.74■□□□□ 0.59
CARMIL3-204ENST00000561354 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
CARMIL3-204ENST00000561354 TOM1O60784 492 aa18.73■□□□□ 0.59
CARMIL3-204ENST00000561354 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
CARMIL3-204ENST00000561354 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
CARMIL3-204ENST00000561354 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
CARMIL3-204ENST00000561354 MROH1Q8NDA8 1641 aa18.7■□□□□ 0.58
CARMIL3-204ENST00000561354 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
CARMIL3-204ENST00000561354 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
CARMIL3-204ENST00000561354 HSPA1LP34931 641 aa18.67■□□□□ 0.58
CARMIL3-204ENST00000561354 PIP4K2BP78356 416 aa18.67■□□□□ 0.58
CARMIL3-204ENST00000561354 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
CARMIL3-204ENST00000561354 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
CARMIL3-204ENST00000561354 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
CARMIL3-204ENST00000561354 CEP152O94986 1710 aa18.63■□□□□ 0.57
CARMIL3-204ENST00000561354 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
CARMIL3-204ENST00000561354 ABCC5O15440 1437 aa18.62■□□□□ 0.57
CARMIL3-204ENST00000561354 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
CARMIL3-204ENST00000561354 UBR1Q8IWV7 1749 aa18.61■□□□□ 0.57
CARMIL3-204ENST00000561354 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
CARMIL3-204ENST00000561354 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
CARMIL3-204ENST00000561354 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 SCAF11Q99590 1463 aaKnown RBP18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 SLIT1O75093 1534 aa18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 CFAP65Q6ZU64 1925 aaKnown RBP18.59■□□□□ 0.57
CARMIL3-204ENST00000561354 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.57
CARMIL3-204ENST00000561354 CROCC2H7BZ55 1655 aa18.58■□□□□ 0.57
CARMIL3-204ENST00000561354 APLP2Q06481 763 aa18.58■□□□□ 0.56
CARMIL3-204ENST00000561354 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.56
CARMIL3-204ENST00000561354 SYNMO15061 1565 aa18.57■□□□□ 0.56
CARMIL3-204ENST00000561354 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
CARMIL3-204ENST00000561354 TXNDC2Q86VQ3 553 aa18.57■□□□□ 0.56
CARMIL3-204ENST00000561354 DAPK1P53355 1430 aa18.57■□□□□ 0.56
CARMIL3-204ENST00000561354 LTKP29376 864 aa18.56■□□□□ 0.56
CARMIL3-204ENST00000561354 KANK1Q14678 1352 aa18.55■□□□□ 0.56
CARMIL3-204ENST00000561354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.56
CARMIL3-204ENST00000561354 EID1Q9Y6B2 187 aa18.54■□□□□ 0.56
CARMIL3-204ENST00000561354 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
CARMIL3-204ENST00000561354 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.55
CARMIL3-204ENST00000561354 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.55
CARMIL3-204ENST00000561354 LMTK2Q8IWU2 1503 aa18.51■□□□□ 0.55
CARMIL3-204ENST00000561354 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
CARMIL3-204ENST00000561354 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
CARMIL3-204ENST00000561354 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
CARMIL3-204ENST00000561354 IDI1Q13907 227 aa18.48■□□□□ 0.55
CARMIL3-204ENST00000561354 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
CARMIL3-204ENST00000561354 EFCAB6Q5THR3 1501 aa18.47■□□□□ 0.55
CARMIL3-204ENST00000561354 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
CARMIL3-204ENST00000561354 NOS1P29475 1434 aa18.45■□□□□ 0.54
CARMIL3-204ENST00000561354 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
CARMIL3-204ENST00000561354 XIRP1Q702N8 1843 aaKnown RBP18.43■□□□□ 0.54
CARMIL3-204ENST00000561354 KCNA6P17658 529 aa18.42■□□□□ 0.54
CARMIL3-204ENST00000561354 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
CARMIL3-204ENST00000561354 TET3O43151 1660 aa18.41■□□□□ 0.54
CARMIL3-204ENST00000561354 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
CARMIL3-204ENST00000561354 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CARMIL3-204ENST00000561354 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
CARMIL3-204ENST00000561354 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
CARMIL3-204ENST00000561354 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.53
CARMIL3-204ENST00000561354 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
CARMIL3-204ENST00000561354 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
CARMIL3-204ENST00000561354 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
CARMIL3-204ENST00000561354 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
CARMIL3-204ENST00000561354 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
CARMIL3-204ENST00000561354 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms