RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF12-223	ENST00000561235	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF12-223	ENST00000561235	TSR1	Q2NL82	804 aa	Known RBP	11.5	□□□□□ -0.57
TCF12-223	ENST00000561235	TYW1B	Q6NUM6	668 aa		11.5	□□□□□ -0.57
TCF12-223	ENST00000561235	IRF6	O14896	467 aa		11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	PDE4D	Q08499	809 aa		11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	GPR153	Q6NV75	609 aa		11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	CCDC102A	Q96A19	550 aa		11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	JPH4	Q96JJ6	628 aa		11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.49	□□□□□ -0.57
TCF12-223	ENST00000561235	FOSB	P53539	338 aa		11.48	□□□□□ -0.57
TCF12-223	ENST00000561235	RIMBP2	O15034	1052 aa		11.47	□□□□□ -0.57
TCF12-223	ENST00000561235	SPNS2	Q8IVW8	549 aa		11.47	□□□□□ -0.57
TCF12-223	ENST00000561235	ZNF710	Q8N1W2	664 aa		11.47	□□□□□ -0.57
TCF12-223	ENST00000561235	ZNF454	Q8N9F8	522 aa		11.47	□□□□□ -0.57
TCF12-223	ENST00000561235	MMRN1	Q13201	1228 aa		11.46	□□□□□ -0.57
TCF12-223	ENST00000561235	FBXW7	Q969H0	707 aa		11.45	□□□□□ -0.58
TCF12-223	ENST00000561235	ZSWIM6	Q9HCJ5	1215 aa		11.45	□□□□□ -0.58
TCF12-223	ENST00000561235	KDM4C	Q9H3R0	1056 aa		11.44	□□□□□ -0.58
TCF12-223	ENST00000561235	GTF3C3	Q9Y5Q9	886 aa		11.43	□□□□□ -0.58
TCF12-223	ENST00000561235	ZDHHC16	Q969W1	377 aa		11.42	□□□□□ -0.58
TCF12-223	ENST00000561235	LHX6	Q9UPM6	363 aa		11.42	□□□□□ -0.58
TCF12-223	ENST00000561235	C6orf132	Q5T0Z8	1188 aa		11.41	□□□□□ -0.58
TCF12-223	ENST00000561235	ADAM33	Q9BZ11	813 aa		11.41	□□□□□ -0.58
TCF12-223	ENST00000561235	EMP3	P54852	163 aa		11.4	□□□□□ -0.58
TCF12-223	ENST00000561235	POTEB3	A0JP26	581 aa		11.38	□□□□□ -0.59
TCF12-223	ENST00000561235	POTEB	Q6S5H4	581 aa		11.38	□□□□□ -0.59
TCF12-223	ENST00000561235	IL27	Q8NEV9	243 aa		11.38	□□□□□ -0.59
TCF12-223	ENST00000561235	AMHR2	Q16671	573 aa		11.37	□□□□□ -0.59
TCF12-223	ENST00000561235	FAM161A	Q3B820	660 aa		11.36	□□□□□ -0.59
TCF12-223	ENST00000561235	PARP9	Q8IXQ6	854 aa		11.36	□□□□□ -0.59
TCF12-223	ENST00000561235	PADI6	Q6TGC4	694 aa		11.35	□□□□□ -0.59
TCF12-223	ENST00000561235	HS3ST6	Q96QI5	342 aa		11.35	□□□□□ -0.59
TCF12-223	ENST00000561235	FAM205C	A6NFA0	338 aa		11.34	□□□□□ -0.59
TCF12-223	ENST00000561235	TTLL12	Q14166	644 aa	Predicted RBP	11.34	□□□□□ -0.59
TCF12-223	ENST00000561235	HOXB1	P14653	301 aa	Predicted RBP	11.33	□□□□□ -0.6
TCF12-223	ENST00000561235	FAM117A	Q9C073	453 aa		11.33	□□□□□ -0.6
TCF12-223	ENST00000561235	PPP4R3B	Q5MIZ7	849 aa		11.32	□□□□□ -0.6
TCF12-223	ENST00000561235	PHOX2B	Q99453	314 aa		11.32	□□□□□ -0.6
TCF12-223	ENST00000561235	KRTAP3-3	Q9BYR6	98 aa		11.32	□□□□□ -0.6
TCF12-223	ENST00000561235	KRTAP3-2	Q9BYR7	98 aa		11.32	□□□□□ -0.6
TCF12-223	ENST00000561235	CERK	Q8TCT0	537 aa		11.31	□□□□□ -0.6
TCF12-223	ENST00000561235	COL9A1	P20849	921 aa		11.3	□□□□□ -0.6
TCF12-223	ENST00000561235	REPIN1	Q9BWE0	567 aa	Known RBP	11.3	□□□□□ -0.6
TCF12-223	ENST00000561235	NLRP7	Q8WX94	980 aa		11.29	□□□□□ -0.6
TCF12-223	ENST00000561235	BCL2L12	Q9HB09	334 aa		11.29	□□□□□ -0.6
TCF12-223	ENST00000561235	PSD	A5PKW4	1024 aa	Predicted RBP	11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	PRSS12	P56730	875 aa		11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	TTC13	Q8NBP0	860 aa		11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	CDCA7L	Q96GN5	454 aa		11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	ADGRG1	Q9Y653	693 aa		11.28	□□□□□ -0.6
TCF12-223	ENST00000561235	MDM2	Q00987	491 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF12-223	ENST00000561235	TIMELESS	Q9UNS1	1208 aa		11.27	□□□□□ -0.61
TCF12-223	ENST00000561235	PLEKHG3	A1L390	1219 aa		11.26	□□□□□ -0.61
TCF12-223	ENST00000561235	RBM27	Q9P2N5	1060 aa	Known RBP	11.26	□□□□□ -0.61
TCF12-223	ENST00000561235	FAM198A	Q9UFP1	575 aa		11.26	□□□□□ -0.61
TCF12-223	ENST00000561235	METTL3	Q86U44	580 aa	Known RBP	11.25	□□□□□ -0.61
TCF12-223	ENST00000561235	OAT	P04181	439 aa		11.24	□□□□□ -0.61
TCF12-223	ENST00000561235	MS4A1	P11836	297 aa		11.24	□□□□□ -0.61
TCF12-223	ENST00000561235	PTPRE	P23469	700 aa		11.24	□□□□□ -0.61
TCF12-223	ENST00000561235	PXYLP1	Q8TE99	480 aa		11.24	□□□□□ -0.61
TCF12-223	ENST00000561235	TMUB1	Q9BVT8	246 aa		11.24	□□□□□ -0.61
TCF12-223	ENST00000561235	CLCN1	P35523	988 aa		11.23	□□□□□ -0.61
TCF12-223	ENST00000561235	PPP1R3G	B7ZBB8	358 aa		11.22	□□□□□ -0.61
TCF12-223	ENST00000561235	DDRGK1	Q96HY6	314 aa		11.22	□□□□□ -0.61
TCF12-223	ENST00000561235	GPCPD1	Q9NPB8	672 aa		11.22	□□□□□ -0.61
TCF12-223	ENST00000561235	DAXX	Q9UER7	740 aa	Predicted RBP	11.22	□□□□□ -0.61
TCF12-223	ENST00000561235	KCNK17	Q96T54	332 aa		11.21	□□□□□ -0.61
TCF12-223	ENST00000561235	TSKS	Q9UJT2	592 aa		11.21	□□□□□ -0.61
TCF12-223	ENST00000561235	C3orf80	F5H4A9	247 aa		11.19	□□□□□ -0.62
TCF12-223	ENST00000561235	RBM46	Q8TBY0	533 aa	Known RBP	11.18	□□□□□ -0.62
TCF12-223	ENST00000561235	SSTR3	P32745	418 aa	Predicted RBP	11.17	□□□□□ -0.62
TCF12-223	ENST00000561235	PROX2	Q3B8N5	592 aa		11.17	□□□□□ -0.62
TCF12-223	ENST00000561235	VARS2	Q5ST30	1063 aa	Known RBP	11.17	□□□□□ -0.62
TCF12-223	ENST00000561235	ERBB3	P21860	1342 aa		11.16	□□□□□ -0.62
TCF12-223	ENST00000561235	TRIM6-TRIM34	B2RNG4	842 aa		11.16	□□□□□ -0.62
TCF12-223	ENST00000561235	NUDT18	Q6ZVK8	323 aa		11.16	□□□□□ -0.62
TCF12-223	ENST00000561235	EYA1	Q99502	592 aa		11.16	□□□□□ -0.62
TCF12-223	ENST00000561235	PSEN2	P49810	448 aa		11.15	□□□□□ -0.62
TCF12-223	ENST00000561235	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.15	□□□□□ -0.62
TCF12-223	ENST00000561235	C14orf37	Q86TY3	774 aa		11.14	□□□□□ -0.63
TCF12-223	ENST00000561235	RCCD1	A6NED2	376 aa		11.13	□□□□□ -0.63
TCF12-223	ENST00000561235	SMAP	O00193	183 aa		11.13	□□□□□ -0.63
TCF12-223	ENST00000561235	PNMA3	Q9UL41	463 aa		11.13	□□□□□ -0.63
TCF12-223	ENST00000561235	POTEE	Q6S8J3	1075 aa		11.12	□□□□□ -0.63
TCF12-223	ENST00000561235	PACS2	Q86VP3	889 aa		11.12	□□□□□ -0.63
TCF12-223	ENST00000561235	TATDN2	Q93075	761 aa		11.12	□□□□□ -0.63
TCF12-223	ENST00000561235	BEGAIN	Q9BUH8	593 aa		11.12	□□□□□ -0.63
TCF12-223	ENST00000561235	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.11	□□□□□ -0.63
TCF12-223	ENST00000561235	NBPF26	B4DH59	902 aa		11.11	□□□□□ -0.63
TCF12-223	ENST00000561235	KCNH8	Q96L42	1107 aa		11.11	□□□□□ -0.63
TCF12-223	ENST00000561235	AXIN2	Q9Y2T1	843 aa		11.11	□□□□□ -0.63
TCF12-223	ENST00000561235	ZBED2	Q9BTP6	218 aa		11.1	□□□□□ -0.63
TCF12-223	ENST00000561235	KIAA1468	Q9P260	1216 aa		11.09	□□□□□ -0.63
TCF12-223	ENST00000561235	ARHGAP33	O14559	1287 aa		11.08	□□□□□ -0.64
TCF12-223	ENST00000561235	DMRTA1	Q5VZB9	504 aa		11.08	□□□□□ -0.64
TCF12-223	ENST00000561235	ONECUT3	O60422	494 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF12-223	ENST00000561235	DNAJB2	P25686	324 aa		11.06	□□□□□ -0.64
TCF12-223	ENST00000561235	ERICH6	Q7L0X2	663 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms