RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
HDDC3-206ENST00000561036 MYT1LQ9UL68 1186 aa24.61■■□□□ 1.53
HDDC3-206ENST00000561036 RICTORQ6R327 1708 aa24.58■■□□□ 1.52
HDDC3-206ENST00000561036 A2MP01023 1474 aa24.57■■□□□ 1.52
HDDC3-206ENST00000561036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
HDDC3-206ENST00000561036 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
HDDC3-206ENST00000561036 KANK1Q14678 1352 aa24.54■■□□□ 1.52
HDDC3-206ENST00000561036 VWDEQ8N2E2 1590 aa24.53■■□□□ 1.52
HDDC3-206ENST00000561036 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 ATP10AO60312 1499 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 PRDM15P57071 1507 aaPredicted RBP24.51■■□□□ 1.51
HDDC3-206ENST00000561036 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 RAPGEF3O95398 923 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 L3MBTL2Q969R5 705 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 BCORL1Q5H9F3 1711 aa24.51■■□□□ 1.51
HDDC3-206ENST00000561036 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
HDDC3-206ENST00000561036 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
HDDC3-206ENST00000561036 KIF3BO15066 747 aa24.49■■□□□ 1.51
HDDC3-206ENST00000561036 FRMPD1Q5SYB0 1578 aa24.48■■□□□ 1.51
HDDC3-206ENST00000561036 TET3O43151 1660 aa24.47■■□□□ 1.51
HDDC3-206ENST00000561036 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
HDDC3-206ENST00000561036 MROH1Q8NDA8 1641 aa24.46■■□□□ 1.51
HDDC3-206ENST00000561036 DIP2CQ9Y2E4 1556 aa24.46■■□□□ 1.51
HDDC3-206ENST00000561036 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
HDDC3-206ENST00000561036 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
HDDC3-206ENST00000561036 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
HDDC3-206ENST00000561036 LMTK2Q8IWU2 1503 aa24.43■■□□□ 1.5
HDDC3-206ENST00000561036 E9PCH4 1651 aa24.4■■□□□ 1.5
HDDC3-206ENST00000561036 PTPRTO14522 1441 aa24.39■■□□□ 1.5
HDDC3-206ENST00000561036 YEATS2Q9ULM3 1422 aa24.36■■□□□ 1.49
HDDC3-206ENST00000561036 REREQ9P2R6 1566 aa24.36■■□□□ 1.49
HDDC3-206ENST00000561036 TRPM2O94759 1503 aa24.35■■□□□ 1.49
HDDC3-206ENST00000561036 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
HDDC3-206ENST00000561036 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
HDDC3-206ENST00000561036 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
HDDC3-206ENST00000561036 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
HDDC3-206ENST00000561036 ABCC3O15438 1527 aa24.28■■□□□ 1.48
HDDC3-206ENST00000561036 AGLP35573 1532 aa24.28■■□□□ 1.48
HDDC3-206ENST00000561036 CEP152O94986 1710 aa24.27■■□□□ 1.48
HDDC3-206ENST00000561036 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
HDDC3-206ENST00000561036 NEURL4Q96JN8 1562 aa24.26■■□□□ 1.47
HDDC3-206ENST00000561036 GGT6Q6P531 493 aa24.26■■□□□ 1.47
HDDC3-206ENST00000561036 COL17A1Q9UMD9 1497 aaPredicted RBP24.26■■□□□ 1.47
HDDC3-206ENST00000561036 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
HDDC3-206ENST00000561036 WASHC2CQ9Y4E1 1318 aa24.24■■□□□ 1.47
HDDC3-206ENST00000561036 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
HDDC3-206ENST00000561036 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
HDDC3-206ENST00000561036 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
HDDC3-206ENST00000561036 ARHGEF40Q8TER5 1519 aa24.23■■□□□ 1.47
HDDC3-206ENST00000561036 RALGAPBQ86X10 1494 aa24.22■■□□□ 1.47
HDDC3-206ENST00000561036 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
HDDC3-206ENST00000561036 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
HDDC3-206ENST00000561036 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
HDDC3-206ENST00000561036 DCAF11Q8TEB1 546 aa24.21■■□□□ 1.47
HDDC3-206ENST00000561036 CAMSAP1Q5T5Y3 1602 aa24.2■■□□□ 1.46
HDDC3-206ENST00000561036 NPATQ14207 1427 aa24.18■■□□□ 1.46
HDDC3-206ENST00000561036 CNTLNQ9NXG0 1405 aa24.18■■□□□ 1.46
HDDC3-206ENST00000561036 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
HDDC3-206ENST00000561036 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
HDDC3-206ENST00000561036 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
HDDC3-206ENST00000561036 KDM2AQ9Y2K7 1162 aa24.14■■□□□ 1.45
HDDC3-206ENST00000561036 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
HDDC3-206ENST00000561036 NOS1P29475 1434 aa24.12■■□□□ 1.45
HDDC3-206ENST00000561036 KIF1BO60333 1816 aa24.1■■□□□ 1.45
HDDC3-206ENST00000561036 HIRIP3Q9BW71 556 aaPredicted RBP24.09■■□□□ 1.45
HDDC3-206ENST00000561036 TRPM1Q7Z4N2 1603 aa24.09■■□□□ 1.45
HDDC3-206ENST00000561036 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
HDDC3-206ENST00000561036 TRHP20396 242 aaPredicted RBP24.06■■□□□ 1.44
HDDC3-206ENST00000561036 LAMC1P11047 1609 aa24.06■■□□□ 1.44
HDDC3-206ENST00000561036 USP47Q96K76 1375 aa24.05■■□□□ 1.44
HDDC3-206ENST00000561036 UGGT1Q9NYU2 1555 aa24.05■■□□□ 1.44
HDDC3-206ENST00000561036 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
HDDC3-206ENST00000561036 PIK3C2BO00750 1634 aa24.04■■□□□ 1.44
HDDC3-206ENST00000561036 CARD11Q9BXL7 1154 aa24.04■■□□□ 1.44
HDDC3-206ENST00000561036 SIGLEC1Q9BZZ2 1709 aa24.04■■□□□ 1.44
HDDC3-206ENST00000561036 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
HDDC3-206ENST00000561036 MYOM2P54296 1465 aa24.03■■□□□ 1.44
HDDC3-206ENST00000561036 SYNMO15061 1565 aa24.02■■□□□ 1.44
HDDC3-206ENST00000561036 MADDQ8WXG6 1647 aa24.02■■□□□ 1.44
HDDC3-206ENST00000561036 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
HDDC3-206ENST00000561036 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
HDDC3-206ENST00000561036 MIER1Q8N108 512 aa24■■□□□ 1.43
HDDC3-206ENST00000561036 RPGRIP1LQ68CZ1 1315 aa24■■□□□ 1.43
HDDC3-206ENST00000561036 PREX1Q8TCU6 1659 aa23.99■■□□□ 1.43
HDDC3-206ENST00000561036 IFT172Q9UG01 1749 aa23.98■■□□□ 1.43
HDDC3-206ENST00000561036 MROH2AA6NES4 1674 aa23.97■■□□□ 1.43
HDDC3-206ENST00000561036 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
HDDC3-206ENST00000561036 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
HDDC3-206ENST00000561036 CFAP65Q6ZU64 1925 aaKnown RBP23.96■■□□□ 1.43
HDDC3-206ENST00000561036 KIAA1210Q9ULL0 1709 aa23.96■■□□□ 1.43
HDDC3-206ENST00000561036 CLTCQ00610 1675 aaKnown RBP23.96■■□□□ 1.43
HDDC3-206ENST00000561036 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
HDDC3-206ENST00000561036 ERVK-7P63135 1459 aa23.95■■□□□ 1.42
HDDC3-206ENST00000561036 CCDC7Q96M83 1385 aa23.95■■□□□ 1.42
HDDC3-206ENST00000561036 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
HDDC3-206ENST00000561036 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
HDDC3-206ENST00000561036 ESF1Q9H501 851 aaKnown RBP23.91■■□□□ 1.42
HDDC3-206ENST00000561036 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
HDDC3-206ENST00000561036 PPLO60437 1756 aa23.9■■□□□ 1.42
HDDC3-206ENST00000561036 C11orf95C9JLR9 678 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms