RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-214ENST00000560987 DAPK1P53355 1430 aa13.73□□□□□ -0.21
SNRPA1-214ENST00000560987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNRPA1-214ENST00000560987 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
SNRPA1-214ENST00000560987 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
SNRPA1-214ENST00000560987 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
SNRPA1-214ENST00000560987 HSPA2P54652 639 aa13.71□□□□□ -0.21
SNRPA1-214ENST00000560987 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
SNRPA1-214ENST00000560987 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
SNRPA1-214ENST00000560987 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
SNRPA1-214ENST00000560987 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-214ENST00000560987 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
SNRPA1-214ENST00000560987 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
SNRPA1-214ENST00000560987 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
SNRPA1-214ENST00000560987 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
SNRPA1-214ENST00000560987 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
SNRPA1-214ENST00000560987 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
SNRPA1-214ENST00000560987 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
SNRPA1-214ENST00000560987 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
SNRPA1-214ENST00000560987 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-214ENST00000560987 KANK1Q14678 1352 aa13.63□□□□□ -0.23
SNRPA1-214ENST00000560987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNRPA1-214ENST00000560987 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-214ENST00000560987 PTPRKQ15262 1439 aa13.62□□□□□ -0.23
SNRPA1-214ENST00000560987 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
SNRPA1-214ENST00000560987 C3P01024 1663 aa13.61□□□□□ -0.23
SNRPA1-214ENST00000560987 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-214ENST00000560987 ERBINQ96RT1 1412 aa13.6□□□□□ -0.23
SNRPA1-214ENST00000560987 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-214ENST00000560987 ANKRD50Q9ULJ7 1429 aa13.58□□□□□ -0.24
SNRPA1-214ENST00000560987 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
SNRPA1-214ENST00000560987 ADGRL2O95490 1459 aa13.58□□□□□ -0.24
SNRPA1-214ENST00000560987 ROCK1Q13464 1354 aa13.58□□□□□ -0.24
SNRPA1-214ENST00000560987 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-214ENST00000560987 MROH2AA6NES4 1674 aa13.57□□□□□ -0.24
SNRPA1-214ENST00000560987 KDM5DQ9BY66 1539 aa13.56□□□□□ -0.24
SNRPA1-214ENST00000560987 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-214ENST00000560987 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
SNRPA1-214ENST00000560987 NPATQ14207 1427 aa13.55□□□□□ -0.24
SNRPA1-214ENST00000560987 PREX1Q8TCU6 1659 aa13.54□□□□□ -0.24
SNRPA1-214ENST00000560987 POTEHQ6S545 545 aa13.54□□□□□ -0.24
SNRPA1-214ENST00000560987 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-214ENST00000560987 TNRQ92752 1358 aa13.53□□□□□ -0.24
SNRPA1-214ENST00000560987 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
SNRPA1-214ENST00000560987 NUP155O75694 1391 aa13.52□□□□□ -0.25
SNRPA1-214ENST00000560987 ABCC3O15438 1527 aa13.52□□□□□ -0.25
SNRPA1-214ENST00000560987 CEP152O94986 1710 aa13.51□□□□□ -0.25
SNRPA1-214ENST00000560987 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
SNRPA1-214ENST00000560987 PZPP20742 1482 aa13.51□□□□□ -0.25
SNRPA1-214ENST00000560987 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-214ENST00000560987 MROH1Q8NDA8 1641 aa13.49□□□□□ -0.25
SNRPA1-214ENST00000560987 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
SNRPA1-214ENST00000560987 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-214ENST00000560987 PTPRTO14522 1441 aa13.47□□□□□ -0.25
SNRPA1-214ENST00000560987 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
SNRPA1-214ENST00000560987 PKD2Q13563 968 aa13.47□□□□□ -0.25
SNRPA1-214ENST00000560987 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-214ENST00000560987 NAIPQ13075 1403 aa13.46□□□□□ -0.26
SNRPA1-214ENST00000560987 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
SNRPA1-214ENST00000560987 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-214ENST00000560987 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
SNRPA1-214ENST00000560987 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
SNRPA1-214ENST00000560987 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
SNRPA1-214ENST00000560987 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
SNRPA1-214ENST00000560987 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
SNRPA1-214ENST00000560987 IDI1Q13907 227 aa13.44□□□□□ -0.26
SNRPA1-214ENST00000560987 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-214ENST00000560987 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-214ENST00000560987 MYO3AQ8NEV4 1616 aa13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 HFM1A2PYH4 1435 aa13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 LMTK2Q8IWU2 1503 aa13.42□□□□□ -0.26
SNRPA1-214ENST00000560987 VWDEQ8N2E2 1590 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 UNC13BO14795 1591 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
SNRPA1-214ENST00000560987 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
SNRPA1-214ENST00000560987 BCANQ96GW7 911 aa13.39□□□□□ -0.27
SNRPA1-214ENST00000560987 SETD5Q9C0A6 1442 aa13.39□□□□□ -0.27
SNRPA1-214ENST00000560987 TET3O43151 1660 aa13.38□□□□□ -0.27
SNRPA1-214ENST00000560987 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
SNRPA1-214ENST00000560987 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-214ENST00000560987 GCC2Q8IWJ2 1684 aa13.37□□□□□ -0.27
SNRPA1-214ENST00000560987 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-214ENST00000560987 HDGFP51858 240 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-214ENST00000560987 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
SNRPA1-214ENST00000560987 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-214ENST00000560987 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
SNRPA1-214ENST00000560987 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
SNRPA1-214ENST00000560987 NOS1P29475 1434 aa13.36□□□□□ -0.27
SNRPA1-214ENST00000560987 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
SNRPA1-214ENST00000560987 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-214ENST00000560987 E9PCH4 1651 aa13.34□□□□□ -0.27
SNRPA1-214ENST00000560987 PPP1R15AO75807 674 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-214ENST00000560987 LTKP29376 864 aa13.34□□□□□ -0.27
SNRPA1-214ENST00000560987 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms