RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
USP8-213ENST00000560885 UHRF1BP1Q6BDS2 1440 aa10.69□□□□□ -0.7
USP8-213ENST00000560885 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
USP8-213ENST00000560885 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
USP8-213ENST00000560885 CLIP1P30622 1438 aa10.68□□□□□ -0.7
USP8-213ENST00000560885 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
USP8-213ENST00000560885 CEBPAP49715 358 aaPredicted RBP10.68□□□□□ -0.7
USP8-213ENST00000560885 PREX2Q70Z35 1606 aa10.68□□□□□ -0.7
USP8-213ENST00000560885 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
USP8-213ENST00000560885 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
USP8-213ENST00000560885 AFAP1Q8N556 730 aa10.67□□□□□ -0.7
USP8-213ENST00000560885 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
USP8-213ENST00000560885 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
USP8-213ENST00000560885 AGLP35573 1532 aa10.66□□□□□ -0.7
USP8-213ENST00000560885 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
USP8-213ENST00000560885 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
USP8-213ENST00000560885 PTPRTO14522 1441 aa10.65□□□□□ -0.7
USP8-213ENST00000560885 KIDINS220Q9ULH0 1771 aa10.65□□□□□ -0.71
USP8-213ENST00000560885 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
USP8-213ENST00000560885 ABCC1P33527 1531 aa10.64□□□□□ -0.71
USP8-213ENST00000560885 MROH2AA6NES4 1674 aa10.64□□□□□ -0.71
USP8-213ENST00000560885 POTEMA6NI47 508 aa10.64□□□□□ -0.71
USP8-213ENST00000560885 POTEB2H3BUK9 544 aa10.64□□□□□ -0.71
USP8-213ENST00000560885 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
USP8-213ENST00000560885 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
USP8-213ENST00000560885 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
USP8-213ENST00000560885 IQSEC2Q5JU85 1478 aa10.62□□□□□ -0.71
USP8-213ENST00000560885 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
USP8-213ENST00000560885 TRAPPC8Q9Y2L5 1435 aa10.62□□□□□ -0.71
USP8-213ENST00000560885 LTBP4Q8N2S1 1624 aa10.62□□□□□ -0.71
USP8-213ENST00000560885 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
USP8-213ENST00000560885 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
USP8-213ENST00000560885 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
USP8-213ENST00000560885 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
USP8-213ENST00000560885 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
USP8-213ENST00000560885 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 SOCS7O14512 581 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 ASTLQ6HA08 431 aaPredicted RBP10.59□□□□□ -0.71
USP8-213ENST00000560885 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
USP8-213ENST00000560885 NPATQ14207 1427 aa10.58□□□□□ -0.72
USP8-213ENST00000560885 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
USP8-213ENST00000560885 SAMD9LQ8IVG5 1584 aa10.58□□□□□ -0.72
USP8-213ENST00000560885 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
USP8-213ENST00000560885 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
USP8-213ENST00000560885 ZNF142P52746 1687 aaPredicted RBP10.57□□□□□ -0.72
USP8-213ENST00000560885 C7P10643 843 aa10.57□□□□□ -0.72
USP8-213ENST00000560885 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
USP8-213ENST00000560885 METRNQ9UJH8 293 aa10.56□□□□□ -0.72
USP8-213ENST00000560885 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
USP8-213ENST00000560885 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
USP8-213ENST00000560885 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
USP8-213ENST00000560885 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
USP8-213ENST00000560885 ATP7AQ04656 1500 aa10.54□□□□□ -0.72
USP8-213ENST00000560885 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
USP8-213ENST00000560885 PLXNC1O60486 1568 aa10.54□□□□□ -0.72
USP8-213ENST00000560885 INO80Q9ULG1 1556 aaPredicted RBP10.54□□□□□ -0.72
USP8-213ENST00000560885 ADGBQ8N7X0 1667 aa10.53□□□□□ -0.72
USP8-213ENST00000560885 SPAG9O60271 1321 aaKnown RBP10.53□□□□□ -0.72
USP8-213ENST00000560885 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
USP8-213ENST00000560885 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
USP8-213ENST00000560885 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
USP8-213ENST00000560885 PLA2R1Q13018 1463 aa10.52□□□□□ -0.73
USP8-213ENST00000560885 PLEKHH2Q8IVE3 1493 aa10.52□□□□□ -0.73
USP8-213ENST00000560885 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.73
USP8-213ENST00000560885 KIAA1107Q9UPP5 1409 aa10.51□□□□□ -0.73
USP8-213ENST00000560885 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
USP8-213ENST00000560885 A2MP01023 1474 aa10.5□□□□□ -0.73
USP8-213ENST00000560885 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
USP8-213ENST00000560885 HNRNPMP52272 730 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP8-213ENST00000560885 PKD2Q13563 968 aa10.5□□□□□ -0.73
USP8-213ENST00000560885 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
USP8-213ENST00000560885 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
USP8-213ENST00000560885 POLR1AO95602 1720 aaPredicted RBP10.49□□□□□ -0.73
USP8-213ENST00000560885 ZNF335Q9H4Z2 1342 aaPredicted RBP10.48□□□□□ -0.73
USP8-213ENST00000560885 DNMT1P26358 1616 aaKnown RBP10.47□□□□□ -0.73
USP8-213ENST00000560885 UBAP1LF5GYI3 381 aa10.47□□□□□ -0.73
USP8-213ENST00000560885 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
USP8-213ENST00000560885 CFDP1Q9UEE9 299 aaPredicted RBP10.47□□□□□ -0.73
USP8-213ENST00000560885 CCNB3Q8WWL7 1395 aa10.47□□□□□ -0.73
USP8-213ENST00000560885 GGT6Q6P531 493 aa10.46□□□□□ -0.73
USP8-213ENST00000560885 A2ML1A8K2U0 1454 aa10.45□□□□□ -0.74
USP8-213ENST00000560885 TIAM1Q13009 1591 aa10.44□□□□□ -0.74
USP8-213ENST00000560885 FAM135AQ9P2D6 1515 aa10.43□□□□□ -0.74
USP8-213ENST00000560885 RTEL1-TNFRSF6BF6WH68 1400 aa10.43□□□□□ -0.74
USP8-213ENST00000560885 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
USP8-213ENST00000560885 CPS1P31327 1500 aa10.43□□□□□ -0.74
USP8-213ENST00000560885 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
USP8-213ENST00000560885 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
USP8-213ENST00000560885 NEURL4Q96JN8 1562 aa10.42□□□□□ -0.74
USP8-213ENST00000560885 EHBP1L1Q8N3D4 1523 aa10.42□□□□□ -0.74
USP8-213ENST00000560885 DHX29Q7Z478 1369 aaKnown RBP10.41□□□□□ -0.74
USP8-213ENST00000560885 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.74
USP8-213ENST00000560885 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
USP8-213ENST00000560885 PZPP20742 1482 aa10.4□□□□□ -0.74
USP8-213ENST00000560885 DEPDC5O75140 1603 aa10.4□□□□□ -0.75
USP8-213ENST00000560885 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
USP8-213ENST00000560885 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms