RNA–Protein interactions for RNA: ENST00000560783.1

LINS1-209, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-209ENST00000560783 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
LINS1-209ENST00000560783 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
LINS1-209ENST00000560783 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
LINS1-209ENST00000560783 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
LINS1-209ENST00000560783 PHF14O94880 888 aa10.12□□□□□ -0.79
LINS1-209ENST00000560783 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
LINS1-209ENST00000560783 LAMC3Q9Y6N6 1575 aa10.11□□□□□ -0.79
LINS1-209ENST00000560783 DDX12PQ92771 950 aa10.1□□□□□ -0.79
LINS1-209ENST00000560783 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
LINS1-209ENST00000560783 PBX2P40425 430 aa10.08□□□□□ -0.8
LINS1-209ENST00000560783 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
LINS1-209ENST00000560783 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
LINS1-209ENST00000560783 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
LINS1-209ENST00000560783 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
LINS1-209ENST00000560783 EPAS1Q99814 870 aa10.07□□□□□ -0.8
LINS1-209ENST00000560783 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
LINS1-209ENST00000560783 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
LINS1-209ENST00000560783 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
LINS1-209ENST00000560783 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
LINS1-209ENST00000560783 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
LINS1-209ENST00000560783 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 SEMA3EO15041 775 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 OSBPP22059 807 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 CYB5RLQ6IPT4 315 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 WDR62O43379 1518 aa10.05□□□□□ -0.8
LINS1-209ENST00000560783 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
LINS1-209ENST00000560783 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
LINS1-209ENST00000560783 PSEN2P49810 448 aa10.03□□□□□ -0.8
LINS1-209ENST00000560783 NBR1Q14596 966 aa10.03□□□□□ -0.8
LINS1-209ENST00000560783 TESPA1A2RU30 521 aaPredicted RBP10.02□□□□□ -0.81
LINS1-209ENST00000560783 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
LINS1-209ENST00000560783 ZCCHC6Q5VYS8 1495 aaKnown RBP10.02□□□□□ -0.81
LINS1-209ENST00000560783 LSM11P83369 360 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINS1-209ENST00000560783 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
LINS1-209ENST00000560783 KCNK17Q96T54 332 aa10.01□□□□□ -0.81
LINS1-209ENST00000560783 ATAD2BQ9ULI0 1458 aa10□□□□□ -0.81
LINS1-209ENST00000560783 PTPREP23469 700 aa10□□□□□ -0.81
LINS1-209ENST00000560783 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
LINS1-209ENST00000560783 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
LINS1-209ENST00000560783 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
LINS1-209ENST00000560783 COL9A1P20849 921 aa9.97□□□□□ -0.81
LINS1-209ENST00000560783 TSR1Q2NL82 804 aaKnown RBP9.97□□□□□ -0.81
LINS1-209ENST00000560783 SLC4A5Q9BY07 1137 aa9.96□□□□□ -0.82
LINS1-209ENST00000560783 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
LINS1-209ENST00000560783 MAP3K7O43318 606 aa9.95□□□□□ -0.82
LINS1-209ENST00000560783 ANKRD13DQ6ZTN6 518 aa9.95□□□□□ -0.82
LINS1-209ENST00000560783 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
LINS1-209ENST00000560783 ZBED2Q9BTP6 218 aa9.95□□□□□ -0.82
LINS1-209ENST00000560783 TK2O00142 265 aa9.94□□□□□ -0.82
LINS1-209ENST00000560783 ADGRD1Q6QNK2 874 aa9.93□□□□□ -0.82
LINS1-209ENST00000560783 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
LINS1-209ENST00000560783 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
LINS1-209ENST00000560783 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
LINS1-209ENST00000560783 HRO43593 1189 aa9.91□□□□□ -0.82
LINS1-209ENST00000560783 NPDC1Q9NQX5 325 aaPredicted RBP9.91□□□□□ -0.82
LINS1-209ENST00000560783 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
LINS1-209ENST00000560783 BAZ1BQ9UIG0 1483 aaKnown RBP9.89□□□□□ -0.83
LINS1-209ENST00000560783 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
LINS1-209ENST00000560783 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
LINS1-209ENST00000560783 RBM26Q5T8P6 1007 aaKnown RBP9.88□□□□□ -0.83
LINS1-209ENST00000560783 ONECUT3O60422 494 aaPredicted RBP9.86□□□□□ -0.83
LINS1-209ENST00000560783 CERKQ8TCT0 537 aa9.86□□□□□ -0.83
LINS1-209ENST00000560783 RSF1Q96T23 1441 aaPredicted RBP9.85□□□□□ -0.83
LINS1-209ENST00000560783 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
LINS1-209ENST00000560783 PTGDRQ13258 359 aa9.85□□□□□ -0.83
LINS1-209ENST00000560783 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
LINS1-209ENST00000560783 PRSS12P56730 875 aa9.84□□□□□ -0.83
LINS1-209ENST00000560783 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
LINS1-209ENST00000560783 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
LINS1-209ENST00000560783 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
LINS1-209ENST00000560783 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
LINS1-209ENST00000560783 RABGEF1Q9UJ41 708 aa9.83□□□□□ -0.84
LINS1-209ENST00000560783 CEP164Q9UPV0 1460 aa9.83□□□□□ -0.84
LINS1-209ENST00000560783 NUTM2FA1L443 756 aa9.82□□□□□ -0.84
LINS1-209ENST00000560783 GPR37O15354 613 aa9.82□□□□□ -0.84
LINS1-209ENST00000560783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINS1-209ENST00000560783 KIAA1468Q9P260 1216 aa9.82□□□□□ -0.84
LINS1-209ENST00000560783 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
LINS1-209ENST00000560783 LMTK3Q96Q04 1460 aa9.82□□□□□ -0.84
LINS1-209ENST00000560783 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
LINS1-209ENST00000560783 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
LINS1-209ENST00000560783 SMARCA4P51532 1647 aa9.79□□□□□ -0.84
LINS1-209ENST00000560783 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
LINS1-209ENST00000560783 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
LINS1-209ENST00000560783 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
LINS1-209ENST00000560783 FCHSD2O94868 740 aa9.78□□□□□ -0.84
LINS1-209ENST00000560783 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
LINS1-209ENST00000560783 SOCS7O14512 581 aa9.76□□□□□ -0.85
LINS1-209ENST00000560783 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
LINS1-209ENST00000560783 FBXO41Q8TF61 875 aa9.76□□□□□ -0.85
LINS1-209ENST00000560783 NBPF3Q9H094 633 aa9.76□□□□□ -0.85
LINS1-209ENST00000560783 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
LINS1-209ENST00000560783 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
LINS1-209ENST00000560783 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
LINS1-209ENST00000560783 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
LINS1-209ENST00000560783 HIC1Q14526 733 aa9.74□□□□□ -0.85
LINS1-209ENST00000560783 LMOD2Q6P5Q4 547 aa9.74□□□□□ -0.85
LINS1-209ENST00000560783 MRPL50Q8N5N7 158 aaKnown RBP9.74□□□□□ -0.85
LINS1-209ENST00000560783 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms