RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 CCER2I3L3R5 266 aa26.78■■□□□ 1.88
HMBOX1-215ENST00000560599 SCAPERQ9BY12 1400 aa26.77■■□□□ 1.88
HMBOX1-215ENST00000560599 WASHC2AQ641Q2 1341 aa26.76■■□□□ 1.87
HMBOX1-215ENST00000560599 KDM5CP41229 1560 aa26.76■■□□□ 1.87
HMBOX1-215ENST00000560599 CNTLNQ9NXG0 1405 aa26.75■■□□□ 1.87
HMBOX1-215ENST00000560599 CCDC7Q96M83 1385 aa26.75■■□□□ 1.87
HMBOX1-215ENST00000560599 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
HMBOX1-215ENST00000560599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.73■■□□□ 1.872e-10■□□□□ 10.7
HMBOX1-215ENST00000560599 ZNF518AQ6AHZ1 1483 aa26.72■■□□□ 1.87
HMBOX1-215ENST00000560599 TET3O43151 1660 aa26.72■■□□□ 1.87
HMBOX1-215ENST00000560599 AFAP1Q8N556 730 aa26.71■■□□□ 1.87
HMBOX1-215ENST00000560599 USP47Q96K76 1375 aa26.71■■□□□ 1.87
HMBOX1-215ENST00000560599 VWDEQ8N2E2 1590 aa26.7■■□□□ 1.86
HMBOX1-215ENST00000560599 PRDM15P57071 1507 aaPredicted RBP26.69■■□□□ 1.86
HMBOX1-215ENST00000560599 CD109Q6YHK3 1445 aa26.69■■□□□ 1.86
HMBOX1-215ENST00000560599 E9PCH4 1651 aa26.68■■□□□ 1.86
HMBOX1-215ENST00000560599 KANK1Q14678 1352 aa26.67■■□□□ 1.86
HMBOX1-215ENST00000560599 TRPM2O94759 1503 aa26.67■■□□□ 1.86
HMBOX1-215ENST00000560599 KIDINS220Q9ULH0 1771 aa26.66■■□□□ 1.86
HMBOX1-215ENST00000560599 POGZQ7Z3K3 1410 aa26.66■■□□□ 1.86
HMBOX1-215ENST00000560599 TRPM1Q7Z4N2 1603 aa26.66■■□□□ 1.86
HMBOX1-215ENST00000560599 GTF3C3Q9Y5Q9 886 aa26.65■■□□□ 1.86
HMBOX1-215ENST00000560599 LAMC1P11047 1609 aa26.65■■□□□ 1.86
HMBOX1-215ENST00000560599 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
HMBOX1-215ENST00000560599 DHX29Q7Z478 1369 aaKnown RBP26.64■■□□□ 1.86
HMBOX1-215ENST00000560599 SPHKAPQ2M3C7 1700 aa26.64■■□□□ 1.85
HMBOX1-215ENST00000560599 A2MP01023 1474 aa26.64■■□□□ 1.85
HMBOX1-215ENST00000560599 NEO1Q92859 1461 aa26.64■■□□□ 1.85
HMBOX1-215ENST00000560599 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
HMBOX1-215ENST00000560599 HECW2Q9P2P5 1572 aa26.62■■□□□ 1.85
HMBOX1-215ENST00000560599 MROH1Q8NDA8 1641 aa26.61■■□□□ 1.85
HMBOX1-215ENST00000560599 ARID4BQ4LE39 1312 aaPredicted RBP26.6■■□□□ 1.85
HMBOX1-215ENST00000560599 RNF17Q9BXT8 1623 aaKnown RBP26.6■■□□□ 1.85
HMBOX1-215ENST00000560599 CEP152O94986 1710 aa26.59■■□□□ 1.85
HMBOX1-215ENST00000560599 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
HMBOX1-215ENST00000560599 MLH3Q9UHC1 1453 aa26.59■■□□□ 1.85
HMBOX1-215ENST00000560599 KIF7Q2M1P5 1343 aa26.59■■□□□ 1.85
HMBOX1-215ENST00000560599 BCORL1Q5H9F3 1711 aa26.58■■□□□ 1.85
HMBOX1-215ENST00000560599 PTPRTO14522 1441 aa26.58■■□□□ 1.85
HMBOX1-215ENST00000560599 LMTK2Q8IWU2 1503 aa26.56■■□□□ 1.84
HMBOX1-215ENST00000560599 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
HMBOX1-215ENST00000560599 MYT1LQ9UL68 1186 aa26.56■■□□□ 1.84
HMBOX1-215ENST00000560599 NEURL4Q96JN8 1562 aa26.55■■□□□ 1.84
HMBOX1-215ENST00000560599 C11orf95C9JLR9 678 aaPredicted RBP26.55■■□□□ 1.84
HMBOX1-215ENST00000560599 GLI2P10070 1586 aa26.55■■□□□ 1.84
HMBOX1-215ENST00000560599 MAP3K4Q9Y6R4 1608 aa26.54■■□□□ 1.84
HMBOX1-215ENST00000560599 ROCK2O75116 1388 aaKnown RBP26.54■■□□□ 1.84
HMBOX1-215ENST00000560599 EFCAB6Q5THR3 1501 aa26.53■■□□□ 1.84
HMBOX1-215ENST00000560599 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
HMBOX1-215ENST00000560599 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
HMBOX1-215ENST00000560599 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
HMBOX1-215ENST00000560599 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
HMBOX1-215ENST00000560599 GPRASP1Q5JY77 1395 aa26.52■■□□□ 1.84
HMBOX1-215ENST00000560599 CLTCL1P53675 1640 aa26.52■■□□□ 1.84
HMBOX1-215ENST00000560599 KIF3BO15066 747 aa26.48■■□□□ 1.83
HMBOX1-215ENST00000560599 ABCA6Q8N139 1617 aa26.48■■□□□ 1.83
HMBOX1-215ENST00000560599 FRMPD1Q5SYB0 1578 aa26.47■■□□□ 1.83
HMBOX1-215ENST00000560599 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
HMBOX1-215ENST00000560599 PPRC1Q5VV67 1664 aaKnown RBP26.45■■□□□ 1.82
HMBOX1-215ENST00000560599 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
HMBOX1-215ENST00000560599 RGL3Q3MIN7 710 aa26.43■■□□□ 1.82
HMBOX1-215ENST00000560599 RICTORQ6R327 1708 aa26.42■■□□□ 1.82
HMBOX1-215ENST00000560599 DIP2CQ9Y2E4 1556 aa26.39■■□□□ 1.82
HMBOX1-215ENST00000560599 PRKRIP1Q9H875 184 aaPredicted RBP26.37■■□□□ 1.81
HMBOX1-215ENST00000560599 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
HMBOX1-215ENST00000560599 KIAA1210Q9ULL0 1709 aa26.35■■□□□ 1.81
HMBOX1-215ENST00000560599 KIF1BO60333 1816 aa26.35■■□□□ 1.81
HMBOX1-215ENST00000560599 MYOM2P54296 1465 aa26.34■■□□□ 1.81
HMBOX1-215ENST00000560599 ST20-MTHFSA0A0A6YYL1 179 aa26.34■■□□□ 1.81
HMBOX1-215ENST00000560599 COL17A1Q9UMD9 1497 aaPredicted RBP26.33■■□□□ 1.81
HMBOX1-215ENST00000560599 IQGAP1P46940 1657 aa26.33■■□□□ 1.81
HMBOX1-215ENST00000560599 ABCC3O15438 1527 aa26.32■■□□□ 1.8
HMBOX1-215ENST00000560599 ZC3H13Q5T200 1668 aaKnown RBP26.32■■□□□ 1.8
HMBOX1-215ENST00000560599 ZMYM4Q5VZL5 1548 aa26.32■■□□□ 1.8
HMBOX1-215ENST00000560599 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
HMBOX1-215ENST00000560599 IFT172Q9UG01 1749 aa26.3■■□□□ 1.8
HMBOX1-215ENST00000560599 CAMSAP1Q5T5Y3 1602 aa26.29■■□□□ 1.8
HMBOX1-215ENST00000560599 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
HMBOX1-215ENST00000560599 POLR3GLQ9BT43 218 aa26.28■■□□□ 1.8
HMBOX1-215ENST00000560599 NBPF1Q3BBV0 1214 aa26.27■■□□□ 1.8
HMBOX1-215ENST00000560599 UGGT1Q9NYU2 1555 aa26.26■■□□□ 1.79
HMBOX1-215ENST00000560599 MROH2AA6NES4 1674 aa26.26■■□□□ 1.79
HMBOX1-215ENST00000560599 KTN1Q86UP2 1357 aaKnown RBP26.24■■□□□ 1.79
HMBOX1-215ENST00000560599 NPATQ14207 1427 aa26.24■■□□□ 1.79
HMBOX1-215ENST00000560599 SCAF11Q99590 1463 aaKnown RBP26.23■■□□□ 1.79
HMBOX1-215ENST00000560599 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
HMBOX1-215ENST00000560599 MRS2Q9HD23 443 aa26.19■■□□□ 1.78
HMBOX1-215ENST00000560599 EIF3AQ14152 1382 aaKnown RBP26.18■■□□□ 1.78
HMBOX1-215ENST00000560599 NRXN1Q9ULB1 1477 aa26.18■■□□□ 1.78
HMBOX1-215ENST00000560599 ARHGAP31Q2M1Z3 1444 aa26.17■■□□□ 1.78
HMBOX1-215ENST00000560599 REREQ9P2R6 1566 aa26.17■■□□□ 1.78
HMBOX1-215ENST00000560599 TESK2Q96S53 571 aa26.16■■□□□ 1.78
HMBOX1-215ENST00000560599 TMF1P82094 1093 aa26.15■■□□□ 1.78
HMBOX1-215ENST00000560599 GGT6Q6P531 493 aa26.15■■□□□ 1.78
HMBOX1-215ENST00000560599 PIK3C2BO00750 1634 aa26.15■■□□□ 1.78
HMBOX1-215ENST00000560599 NOS1P29475 1434 aa26.15■■□□□ 1.78
HMBOX1-215ENST00000560599 YEATS2Q9ULM3 1422 aa26.15■■□□□ 1.78
HMBOX1-215ENST00000560599 FAM69CQ0P6D2 419 aa26.14■■□□□ 1.78
HMBOX1-215ENST00000560599 DISP3Q9P2K9 1392 aa26.14■■□□□ 1.78
HMBOX1-215ENST00000560599 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms