RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
RPL28-210ENST00000560583 MIA2Q96PC5 1412 aa28.36■■■□□ 2.13
RPL28-210ENST00000560583 PLA2R1Q13018 1463 aa28.35■■■□□ 2.13
RPL28-210ENST00000560583 KIF3BO15066 747 aa28.34■■■□□ 2.13
RPL28-210ENST00000560583 CROCC2H7BZ55 1655 aa28.33■■■□□ 2.13
RPL28-210ENST00000560583 PZPP20742 1482 aa28.33■■■□□ 2.13
RPL28-210ENST00000560583 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
RPL28-210ENST00000560583 EIF2AK4Q9P2K8 1649 aaKnown RBP28.32■■■□□ 2.12
RPL28-210ENST00000560583 TCOF1Q13428 1488 aaKnown RBP28.32■■■□□ 2.12
RPL28-210ENST00000560583 MROH1Q8NDA8 1641 aa28.3■■■□□ 2.12
RPL28-210ENST00000560583 A2ML1A8K2U0 1454 aa28.3■■■□□ 2.12
RPL28-210ENST00000560583 ZC3H13Q5T200 1668 aaKnown RBP28.29■■■□□ 2.12
RPL28-210ENST00000560583 TSPY4P0CV99 314 aa28.28■■■□□ 2.12
RPL28-210ENST00000560583 TSPY10P0CW01 314 aa28.28■■■□□ 2.12
RPL28-210ENST00000560583 PTPN23Q9H3S7 1636 aa28.27■■■□□ 2.12
RPL28-210ENST00000560583 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
RPL28-210ENST00000560583 ABCC3O15438 1527 aa28.25■■■□□ 2.11
RPL28-210ENST00000560583 POLR1AO95602 1720 aaPredicted RBP28.25■■■□□ 2.11
RPL28-210ENST00000560583 TNRQ92752 1358 aa28.24■■■□□ 2.11
RPL28-210ENST00000560583 FBXO31Q5XUX0 539 aaPredicted RBP28.23■■■□□ 2.11
RPL28-210ENST00000560583 SHANK2Q9UPX8 1470 aa28.22■■■□□ 2.11
RPL28-210ENST00000560583 CEP152O94986 1710 aa28.22■■■□□ 2.11
RPL28-210ENST00000560583 WASHC2CQ9Y4E1 1318 aa28.2■■■□□ 2.11
RPL28-210ENST00000560583 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.11
RPL28-210ENST00000560583 DUOX2Q9NRD8 1548 aa28.2■■■□□ 2.1
RPL28-210ENST00000560583 IQSEC2Q5JU85 1478 aa28.19■■■□□ 2.1
RPL28-210ENST00000560583 ABCC5O15440 1437 aa28.18■■■□□ 2.1
RPL28-210ENST00000560583 SPATA31D1Q6ZQQ2 1576 aa28.17■■■□□ 2.1
RPL28-210ENST00000560583 PKD2Q13563 968 aa28.17■■■□□ 2.1
RPL28-210ENST00000560583 FGD6Q6ZV73 1430 aa28.17■■■□□ 2.1
RPL28-210ENST00000560583 PRDM15P57071 1507 aaPredicted RBP28.15■■■□□ 2.1
RPL28-210ENST00000560583 NLRP1Q9C000 1473 aa28.15■■■□□ 2.1
RPL28-210ENST00000560583 ZNF335Q9H4Z2 1342 aaPredicted RBP28.14■■■□□ 2.09
RPL28-210ENST00000560583 DAPK1P53355 1430 aa28.13■■■□□ 2.09
RPL28-210ENST00000560583 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
RPL28-210ENST00000560583 ERVK-7P63135 1459 aa28.11■■■□□ 2.09
RPL28-210ENST00000560583 UGGT1Q9NYU2 1555 aa28.11■■■□□ 2.09
RPL28-210ENST00000560583 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
RPL28-210ENST00000560583 APLP2Q06481 763 aa28.1■■■□□ 2.09
RPL28-210ENST00000560583 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
RPL28-210ENST00000560583 CFAP65Q6ZU64 1925 aaKnown RBP28.06■■■□□ 2.08
RPL28-210ENST00000560583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
RPL28-210ENST00000560583 UBR1Q8IWV7 1749 aa28.03■■■□□ 2.08
RPL28-210ENST00000560583 MED14O60244 1454 aa28■■■□□ 2.07
RPL28-210ENST00000560583 IQGAP1P46940 1657 aa28■■■□□ 2.07
RPL28-210ENST00000560583 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
RPL28-210ENST00000560583 RRP7BPQ9NSQ0 103 aa27.99■■■□□ 2.07
RPL28-210ENST00000560583 ARHGAP31Q2M1Z3 1444 aa27.98■■■□□ 2.07
RPL28-210ENST00000560583 ADGRL2O95490 1459 aa27.95■■■□□ 2.07
RPL28-210ENST00000560583 THEMISQ8N1K5 641 aaPredicted RBP27.95■■■□□ 2.06
RPL28-210ENST00000560583 NPHP4O75161 1426 aaPredicted RBP27.94■■■□□ 2.06
RPL28-210ENST00000560583 CPS1P31327 1500 aa27.93■■■□□ 2.06
RPL28-210ENST00000560583 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
RPL28-210ENST00000560583 ANKRD30AQ9BXX3 1397 aa27.93■■■□□ 2.06
RPL28-210ENST00000560583 ANKLE2Q86XL3 938 aa27.92■■■□□ 2.06
RPL28-210ENST00000560583 CHIC2Q9UKJ5 165 aa27.91■■■□□ 2.06
RPL28-210ENST00000560583 PIK3C2BO00750 1634 aa27.91■■■□□ 2.06
RPL28-210ENST00000560583 STRCP1A6NGW2 1772 aa27.91■■■□□ 2.06
RPL28-210ENST00000560583 ARHGAP23Q9P227 1491 aa27.88■■■□□ 2.05
RPL28-210ENST00000560583 EFCAB6Q5THR3 1501 aa27.87■■■□□ 2.05
RPL28-210ENST00000560583 SLIT1O75093 1534 aa27.87■■■□□ 2.05
RPL28-210ENST00000560583 SYNMO15061 1565 aa27.86■■■□□ 2.05
RPL28-210ENST00000560583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.85■■■□□ 2.05
RPL28-210ENST00000560583 UBAP1LF5GYI3 381 aa27.84■■■□□ 2.05
RPL28-210ENST00000560583 KDM5AP29375 1690 aaKnown RBP27.84■■■□□ 2.05
RPL28-210ENST00000560583 KANK1Q14678 1352 aa27.84■■■□□ 2.05
RPL28-210ENST00000560583 SCAF11Q99590 1463 aaKnown RBP27.83■■■□□ 2.04
RPL28-210ENST00000560583 ALKQ9UM73 1620 aa27.81■■■□□ 2.04
RPL28-210ENST00000560583 FAM50AQ14320 339 aaKnown RBP27.8■■■□□ 2.04
RPL28-210ENST00000560583 ANKRD50Q9ULJ7 1429 aa27.77■■■□□ 2.04
RPL28-210ENST00000560583 UNC13BO14795 1591 aa27.77■■■□□ 2.04
RPL28-210ENST00000560583 NOS1P29475 1434 aa27.76■■■□□ 2.04
RPL28-210ENST00000560583 DISP3Q9P2K9 1392 aa27.75■■■□□ 2.03
RPL28-210ENST00000560583 TET3O43151 1660 aa27.75■■■□□ 2.03
RPL28-210ENST00000560583 LTKP29376 864 aa27.74■■■□□ 2.03
RPL28-210ENST00000560583 ADGRB3O60242 1522 aa27.73■■■□□ 2.03
RPL28-210ENST00000560583 LRRC7Q96NW7 1537 aa27.73■■■□□ 2.03
RPL28-210ENST00000560583 GCC2Q8IWJ2 1684 aa27.72■■■□□ 2.03
RPL28-210ENST00000560583 TMEM2Q9UHN6 1383 aa27.71■■■□□ 2.03
RPL28-210ENST00000560583 XIRP1Q702N8 1843 aaKnown RBP27.7■■■□□ 2.02
RPL28-210ENST00000560583 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.02
RPL28-210ENST00000560583 MYO5BQ9ULV0 1848 aa27.68■■■□□ 2.02
RPL28-210ENST00000560583 TXNDC2Q86VQ3 553 aa27.67■■■□□ 2.02
RPL28-210ENST00000560583 IDI1Q13907 227 aa27.66■■■□□ 2.02
RPL28-210ENST00000560583 E9PCH4 1651 aa27.65■■■□□ 2.02
RPL28-210ENST00000560583 ROCK1Q13464 1354 aa27.64■■■□□ 2.02
RPL28-210ENST00000560583 IQGAP3Q86VI3 1631 aa27.64■■■□□ 2.02
RPL28-210ENST00000560583 ILDR2Q71H61 639 aa27.63■■■□□ 2.01
RPL28-210ENST00000560583 TOM1O60784 492 aa27.62■■■□□ 2.01
RPL28-210ENST00000560583 PIP4K2BP78356 416 aa27.62■■■□□ 2.01
RPL28-210ENST00000560583 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
RPL28-210ENST00000560583 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
RPL28-210ENST00000560583 HSPA1LP34931 641 aa27.59■■■□□ 2.01
RPL28-210ENST00000560583 TMEM131LA2VDJ0 1609 aa27.59■■■□□ 2.01
RPL28-210ENST00000560583 STAG3Q9UJ98 1225 aa27.58■■■□□ 2.01
RPL28-210ENST00000560583 SLC52A1Q9NWF4 448 aa27.55■■■□□ 2
RPL28-210ENST00000560583 ZFYVE9O95405 1425 aa27.55■■■□□ 2
RPL28-210ENST00000560583 NWD1Q149M9 1564 aa27.55■■■□□ 2
RPL28-210ENST00000560583 MED1Q15648 1581 aaPredicted RBP27.54■■■□□ 2
RPL28-210ENST00000560583 PPARGC1BQ86YN6 1023 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms