RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
ALDH1A3-206ENST00000560555 DHX29Q7Z478 1369 aaKnown RBP18.86■□□□□ 0.61
ALDH1A3-206ENST00000560555 DAPK1P53355 1430 aa18.85■□□□□ 0.61
ALDH1A3-206ENST00000560555 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
ALDH1A3-206ENST00000560555 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
ALDH1A3-206ENST00000560555 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
ALDH1A3-206ENST00000560555 HSPA1LP34931 641 aa18.84■□□□□ 0.61
ALDH1A3-206ENST00000560555 C3P01024 1663 aa18.83■□□□□ 0.61
ALDH1A3-206ENST00000560555 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
ALDH1A3-206ENST00000560555 SHANK2Q9UPX8 1470 aa18.8■□□□□ 0.6
ALDH1A3-206ENST00000560555 PKD2Q13563 968 aa18.8■□□□□ 0.6
ALDH1A3-206ENST00000560555 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
ALDH1A3-206ENST00000560555 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
ALDH1A3-206ENST00000560555 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
ALDH1A3-206ENST00000560555 MED1Q15648 1581 aaPredicted RBP18.78■□□□□ 0.6
ALDH1A3-206ENST00000560555 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
ALDH1A3-206ENST00000560555 NPATQ14207 1427 aa18.77■□□□□ 0.6
ALDH1A3-206ENST00000560555 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.6
ALDH1A3-206ENST00000560555 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
ALDH1A3-206ENST00000560555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.77■□□□□ 0.6
ALDH1A3-206ENST00000560555 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
ALDH1A3-206ENST00000560555 KIF3BO15066 747 aa18.75■□□□□ 0.59
ALDH1A3-206ENST00000560555 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
ALDH1A3-206ENST00000560555 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
ALDH1A3-206ENST00000560555 GGT6Q6P531 493 aa18.74■□□□□ 0.59
ALDH1A3-206ENST00000560555 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
ALDH1A3-206ENST00000560555 TOM1O60784 492 aa18.73■□□□□ 0.59
ALDH1A3-206ENST00000560555 MROH1Q8NDA8 1641 aa18.72■□□□□ 0.59
ALDH1A3-206ENST00000560555 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
ALDH1A3-206ENST00000560555 DUOX2Q9NRD8 1548 aa18.72■□□□□ 0.59
ALDH1A3-206ENST00000560555 KIF15Q9NS87 1388 aa18.71■□□□□ 0.59
ALDH1A3-206ENST00000560555 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
ALDH1A3-206ENST00000560555 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
ALDH1A3-206ENST00000560555 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
ALDH1A3-206ENST00000560555 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
ALDH1A3-206ENST00000560555 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
ALDH1A3-206ENST00000560555 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
ALDH1A3-206ENST00000560555 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
ALDH1A3-206ENST00000560555 ITGAEP38570 1179 aa18.64■□□□□ 0.57
ALDH1A3-206ENST00000560555 ROCK1Q13464 1354 aa18.64■□□□□ 0.57
ALDH1A3-206ENST00000560555 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
ALDH1A3-206ENST00000560555 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
ALDH1A3-206ENST00000560555 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
ALDH1A3-206ENST00000560555 VWDEQ8N2E2 1590 aa18.6■□□□□ 0.57
ALDH1A3-206ENST00000560555 ABCC3O15438 1527 aa18.6■□□□□ 0.57
ALDH1A3-206ENST00000560555 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
ALDH1A3-206ENST00000560555 CEP170BQ9Y4F5 1589 aaPredicted RBP18.59■□□□□ 0.57
ALDH1A3-206ENST00000560555 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
ALDH1A3-206ENST00000560555 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
ALDH1A3-206ENST00000560555 CEP152O94986 1710 aa18.58■□□□□ 0.57
ALDH1A3-206ENST00000560555 CPS1P31327 1500 aa18.58■□□□□ 0.56
ALDH1A3-206ENST00000560555 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
ALDH1A3-206ENST00000560555 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
ALDH1A3-206ENST00000560555 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
ALDH1A3-206ENST00000560555 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
ALDH1A3-206ENST00000560555 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
ALDH1A3-206ENST00000560555 PZPP20742 1482 aa18.54■□□□□ 0.56
ALDH1A3-206ENST00000560555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.56
ALDH1A3-206ENST00000560555 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
ALDH1A3-206ENST00000560555 NAIPQ13075 1403 aa18.54■□□□□ 0.56
ALDH1A3-206ENST00000560555 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
ALDH1A3-206ENST00000560555 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.56
ALDH1A3-206ENST00000560555 LMTK2Q8IWU2 1503 aa18.52■□□□□ 0.56
ALDH1A3-206ENST00000560555 UNC13BO14795 1591 aa18.51■□□□□ 0.55
ALDH1A3-206ENST00000560555 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
ALDH1A3-206ENST00000560555 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
ALDH1A3-206ENST00000560555 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
ALDH1A3-206ENST00000560555 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
ALDH1A3-206ENST00000560555 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
ALDH1A3-206ENST00000560555 ERVK-7P63135 1459 aa18.46■□□□□ 0.54
ALDH1A3-206ENST00000560555 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
ALDH1A3-206ENST00000560555 TNRQ92752 1358 aa18.44■□□□□ 0.54
ALDH1A3-206ENST00000560555 IQGAP3Q86VI3 1631 aa18.43■□□□□ 0.54
ALDH1A3-206ENST00000560555 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
ALDH1A3-206ENST00000560555 KANK1Q14678 1352 aa18.42■□□□□ 0.54
ALDH1A3-206ENST00000560555 NOS1P29475 1434 aa18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 TET3O43151 1660 aa18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 THEMISQ8N1K5 641 aaPredicted RBP18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 NUP155O75694 1391 aa18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 E9PCH4 1651 aa18.41■□□□□ 0.54
ALDH1A3-206ENST00000560555 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
ALDH1A3-206ENST00000560555 SYNMO15061 1565 aa18.39■□□□□ 0.53
ALDH1A3-206ENST00000560555 IDI1Q13907 227 aa18.37■□□□□ 0.53
ALDH1A3-206ENST00000560555 MED14O60244 1454 aa18.37■□□□□ 0.53
ALDH1A3-206ENST00000560555 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
ALDH1A3-206ENST00000560555 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
ALDH1A3-206ENST00000560555 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
ALDH1A3-206ENST00000560555 RPRD2Q5VT52 1461 aaKnown RBP18.34■□□□□ 0.53
ALDH1A3-206ENST00000560555 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
ALDH1A3-206ENST00000560555 PIK3C2BO00750 1634 aa18.32■□□□□ 0.52
ALDH1A3-206ENST00000560555 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
ALDH1A3-206ENST00000560555 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
ALDH1A3-206ENST00000560555 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
ALDH1A3-206ENST00000560555 RAB3GAP2Q9H2M9 1393 aa18.27■□□□□ 0.51
ALDH1A3-206ENST00000560555 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
ALDH1A3-206ENST00000560555 LTKP29376 864 aa18.26■□□□□ 0.51
ALDH1A3-206ENST00000560555 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
ALDH1A3-206ENST00000560555 SLC52A1Q9NWF4 448 aa18.26■□□□□ 0.51
ALDH1A3-206ENST00000560555 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms