RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 A2ML1A8K2U0 1454 aa21.49■■□□□ 1.03
SMAD3-214ENST00000560402 PZPP20742 1482 aa21.49■■□□□ 1.03
SMAD3-214ENST00000560402 TCOF1Q13428 1488 aaKnown RBP21.49■■□□□ 1.03
SMAD3-214ENST00000560402 ZC3H13Q5T200 1668 aaKnown RBP21.49■■□□□ 1.03
SMAD3-214ENST00000560402 RNF17Q9BXT8 1623 aaKnown RBP21.48■■□□□ 1.03
SMAD3-214ENST00000560402 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
SMAD3-214ENST00000560402 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
SMAD3-214ENST00000560402 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
SMAD3-214ENST00000560402 MYOM3Q5VTT5 1437 aa21.46■■□□□ 1.03
SMAD3-214ENST00000560402 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
SMAD3-214ENST00000560402 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
SMAD3-214ENST00000560402 KIF3BO15066 747 aa21.44■■□□□ 1.02
SMAD3-214ENST00000560402 PKD2Q13563 968 aa21.44■■□□□ 1.02
SMAD3-214ENST00000560402 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
SMAD3-214ENST00000560402 TNRQ92752 1358 aa21.42■■□□□ 1.02
SMAD3-214ENST00000560402 CROCC2H7BZ55 1655 aa21.41■■□□□ 1.02
SMAD3-214ENST00000560402 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
SMAD3-214ENST00000560402 NCKAP5LQ9HCH0 1330 aa21.38■■□□□ 1.01
SMAD3-214ENST00000560402 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
SMAD3-214ENST00000560402 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
SMAD3-214ENST00000560402 ABCC3O15438 1527 aa21.37■■□□□ 1.01
SMAD3-214ENST00000560402 DUOX2Q9NRD8 1548 aa21.36■■□□□ 1.01
SMAD3-214ENST00000560402 MROH1Q8NDA8 1641 aa21.36■■□□□ 1.01
SMAD3-214ENST00000560402 NEURL4Q96JN8 1562 aa21.36■■□□□ 1.01
SMAD3-214ENST00000560402 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
SMAD3-214ENST00000560402 SPATA31D1Q6ZQQ2 1576 aa21.35■■□□□ 1.01
SMAD3-214ENST00000560402 PTPN23Q9H3S7 1636 aa21.34■■□□□ 1.01
SMAD3-214ENST00000560402 CEP152O94986 1710 aa21.33■■□□□ 1.01
SMAD3-214ENST00000560402 DEPDC5O75140 1603 aa21.33■■□□□ 1
SMAD3-214ENST00000560402 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
SMAD3-214ENST00000560402 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
SMAD3-214ENST00000560402 PRDM15P57071 1507 aaPredicted RBP21.31■■□□□ 1
SMAD3-214ENST00000560402 FBXO31Q5XUX0 539 aaPredicted RBP21.3■■□□□ 1
SMAD3-214ENST00000560402 ERBINQ96RT1 1412 aa21.29■■□□□ 1
SMAD3-214ENST00000560402 APLP2Q06481 763 aa21.29■■□□□ 1
SMAD3-214ENST00000560402 ERVK-7P63135 1459 aa21.28■■□□□ 1
SMAD3-214ENST00000560402 CPS1P31327 1500 aa21.28■■□□□ 1
SMAD3-214ENST00000560402 MED14O60244 1454 aa21.26■□□□□ 0.99
SMAD3-214ENST00000560402 KIF15Q9NS87 1388 aa21.26■□□□□ 0.99
SMAD3-214ENST00000560402 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
SMAD3-214ENST00000560402 ABCC5O15440 1437 aa21.25■□□□□ 0.99
SMAD3-214ENST00000560402 THEMISQ8N1K5 641 aaPredicted RBP21.25■□□□□ 0.99
SMAD3-214ENST00000560402 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
SMAD3-214ENST00000560402 DAPK1P53355 1430 aa21.24■□□□□ 0.99
SMAD3-214ENST00000560402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMAD3-214ENST00000560402 ARHGAP31Q2M1Z3 1444 aa21.22■□□□□ 0.99
SMAD3-214ENST00000560402 UBR1Q8IWV7 1749 aa21.22■□□□□ 0.99
SMAD3-214ENST00000560402 ANKLE2Q86XL3 938 aa21.22■□□□□ 0.99
SMAD3-214ENST00000560402 VWDEQ8N2E2 1590 aa21.21■□□□□ 0.99
SMAD3-214ENST00000560402 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
SMAD3-214ENST00000560402 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
SMAD3-214ENST00000560402 UBAP1LF5GYI3 381 aa21.17■□□□□ 0.98
SMAD3-214ENST00000560402 SYNMO15061 1565 aa21.17■□□□□ 0.98
SMAD3-214ENST00000560402 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
SMAD3-214ENST00000560402 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
SMAD3-214ENST00000560402 DISP3Q9P2K9 1392 aa21.16■□□□□ 0.98
SMAD3-214ENST00000560402 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
SMAD3-214ENST00000560402 KANK1Q14678 1352 aa21.15■□□□□ 0.98
SMAD3-214ENST00000560402 ADGRL2O95490 1459 aa21.14■□□□□ 0.98
SMAD3-214ENST00000560402 SLIT1O75093 1534 aa21.14■□□□□ 0.97
SMAD3-214ENST00000560402 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
SMAD3-214ENST00000560402 SCAF11Q99590 1463 aaKnown RBP21.12■□□□□ 0.97
SMAD3-214ENST00000560402 ARHGAP23Q9P227 1491 aa21.12■□□□□ 0.97
SMAD3-214ENST00000560402 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
SMAD3-214ENST00000560402 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
SMAD3-214ENST00000560402 STRCP1A6NGW2 1772 aa21.08■□□□□ 0.97
SMAD3-214ENST00000560402 TOM1O60784 492 aa21.06■□□□□ 0.96
SMAD3-214ENST00000560402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.962e-7■■□□□ 12.5
SMAD3-214ENST00000560402 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
SMAD3-214ENST00000560402 RPRD2Q5VT52 1461 aaKnown RBP21.02■□□□□ 0.96
SMAD3-214ENST00000560402 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
SMAD3-214ENST00000560402 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
SMAD3-214ENST00000560402 ALKQ9UM73 1620 aa21.01■□□□□ 0.95
SMAD3-214ENST00000560402 TET3O43151 1660 aa21.01■□□□□ 0.95
SMAD3-214ENST00000560402 NOS1P29475 1434 aa21.01■□□□□ 0.95
SMAD3-214ENST00000560402 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
SMAD3-214ENST00000560402 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
SMAD3-214ENST00000560402 TMEM2Q9UHN6 1383 aa20.99■□□□□ 0.95
SMAD3-214ENST00000560402 UNC13BO14795 1591 aa20.99■□□□□ 0.95
SMAD3-214ENST00000560402 EID1Q9Y6B2 187 aa20.99■□□□□ 0.95
SMAD3-214ENST00000560402 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
SMAD3-214ENST00000560402 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
SMAD3-214ENST00000560402 FAM50AQ14320 339 aaKnown RBP20.96■□□□□ 0.95
SMAD3-214ENST00000560402 ILDR2Q71H61 639 aa20.96■□□□□ 0.95
SMAD3-214ENST00000560402 XIRP1Q702N8 1843 aaKnown RBP20.95■□□□□ 0.94
SMAD3-214ENST00000560402 LTKP29376 864 aa20.95■□□□□ 0.94
SMAD3-214ENST00000560402 PIP4K2BP78356 416 aa20.95■□□□□ 0.94
SMAD3-214ENST00000560402 STAG3Q9UJ98 1225 aa20.95■□□□□ 0.94
SMAD3-214ENST00000560402 MED1Q15648 1581 aaPredicted RBP20.94■□□□□ 0.94
SMAD3-214ENST00000560402 SOCS7O14512 581 aa20.92■□□□□ 0.94
SMAD3-214ENST00000560402 HSPA1LP34931 641 aa20.92■□□□□ 0.94
SMAD3-214ENST00000560402 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
SMAD3-214ENST00000560402 IDI1Q13907 227 aa20.91■□□□□ 0.94
SMAD3-214ENST00000560402 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
SMAD3-214ENST00000560402 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
SMAD3-214ENST00000560402 NWD1Q149M9 1564 aa20.9■□□□□ 0.94
SMAD3-214ENST00000560402 MYO5BQ9ULV0 1848 aa20.89■□□□□ 0.93
SMAD3-214ENST00000560402 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
SMAD3-214ENST00000560402 E9PCH4 1651 aa20.87■□□□□ 0.93
SMAD3-214ENST00000560402 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms