RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.77	■■■■□ 3
TM2D3-209	ENST00000560013	TSPOAP1	O95153	1857 aa		33.76	■■■□□ 2.99
TM2D3-209	ENST00000560013	DEPDC5	O75140	1603 aa		33.75	■■■□□ 2.99
TM2D3-209	ENST00000560013	RICTOR	Q6R327	1708 aa		33.75	■■■□□ 2.99
TM2D3-209	ENST00000560013	PPRC1	Q5VV67	1664 aa	Known RBP	33.73	■■■□□ 2.99
TM2D3-209	ENST00000560013	KIF13A	Q9H1H9	1805 aa		33.73	■■■□□ 2.99
TM2D3-209	ENST00000560013	RAPGEF3	O95398	923 aa		33.72	■■■□□ 2.99
TM2D3-209	ENST00000560013	L3MBTL2	Q969R5	705 aa		33.7	■■■□□ 2.99
TM2D3-209	ENST00000560013	TEX14	Q8IWB6	1497 aa		33.7	■■■□□ 2.99
TM2D3-209	ENST00000560013	A2M	P01023	1474 aa		33.69	■■■□□ 2.98
TM2D3-209	ENST00000560013	KIF3B	O15066	747 aa		33.67	■■■□□ 2.98
TM2D3-209	ENST00000560013	ABCA6	Q8N139	1617 aa		33.64	■■■□□ 2.98
TM2D3-209	ENST00000560013	DIEXF	Q68CQ4	756 aa	Known RBP	33.64	■■■□□ 2.98
TM2D3-209	ENST00000560013	KANK1	Q14678	1352 aa		33.61	■■■□□ 2.97
TM2D3-209	ENST00000560013	VWDE	Q8N2E2	1590 aa		33.61	■■■□□ 2.97
TM2D3-209	ENST00000560013	PRDM15	P57071	1507 aa	Predicted RBP	33.61	■■■□□ 2.97
TM2D3-209	ENST00000560013	FRMPD1	Q5SYB0	1578 aa		33.6	■■■□□ 2.97
TM2D3-209	ENST00000560013	MROH1	Q8NDA8	1641 aa		33.59	■■■□□ 2.97
TM2D3-209	ENST00000560013	DIP2C	Q9Y2E4	1556 aa		33.56	■■■□□ 2.96
TM2D3-209	ENST00000560013	TET3	O43151	1660 aa		33.56	■■■□□ 2.96
TM2D3-209	ENST00000560013	RNF17	Q9BXT8	1623 aa	Known RBP	33.55	■■■□□ 2.96
TM2D3-209	ENST00000560013	BCORL1	Q5H9F3	1711 aa		33.55	■■■□□ 2.96
TM2D3-209	ENST00000560013		E9PCH4	1651 aa		33.55	■■■□□ 2.96
TM2D3-209	ENST00000560013	PLA2R1	Q13018	1463 aa		33.55	■■■□□ 2.96
TM2D3-209	ENST00000560013	ATP10A	O60312	1499 aa		33.55	■■■□□ 2.96
TM2D3-209	ENST00000560013	ZMYM4	Q5VZL5	1548 aa		33.54	■■■□□ 2.96
TM2D3-209	ENST00000560013	CCDC144A	A2RUR9	1427 aa		33.54	■■■□□ 2.96
TM2D3-209	ENST00000560013	YEATS2	Q9ULM3	1422 aa		33.48	■■■□□ 2.95
TM2D3-209	ENST00000560013	NBPF8	Q3BBV2	869 aa		33.44	■■■□□ 2.94
TM2D3-209	ENST00000560013	LMTK2	Q8IWU2	1503 aa		33.43	■■■□□ 2.94
TM2D3-209	ENST00000560013	SPHKAP	Q2M3C7	1700 aa		33.43	■■■□□ 2.94
TM2D3-209	ENST00000560013	CEP152	O94986	1710 aa		33.41	■■■□□ 2.94
TM2D3-209	ENST00000560013	PTPRT	O14522	1441 aa		33.4	■■■□□ 2.94
TM2D3-209	ENST00000560013	GGT6	Q6P531	493 aa		33.39	■■■□□ 2.94
TM2D3-209	ENST00000560013	EFCAB6	Q5THR3	1501 aa		33.39	■■■□□ 2.94
TM2D3-209	ENST00000560013	TRPM2	O94759	1503 aa		33.38	■■■□□ 2.93
TM2D3-209	ENST00000560013	UHRF1BP1	Q6BDS2	1440 aa		33.34	■■■□□ 2.93
TM2D3-209	ENST00000560013	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.34	■■■□□ 2.93
TM2D3-209	ENST00000560013	DCAF11	Q8TEB1	546 aa		33.32	■■■□□ 2.92
TM2D3-209	ENST00000560013	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.31	■■■□□ 2.92
TM2D3-209	ENST00000560013	RERE	Q9P2R6	1566 aa		33.29	■■■□□ 2.92
TM2D3-209	ENST00000560013	ABCC3	O15438	1527 aa		33.29	■■■□□ 2.92
TM2D3-209	ENST00000560013	WASHC2C	Q9Y4E1	1318 aa		33.29	■■■□□ 2.92
TM2D3-209	ENST00000560013	RGL3	Q3MIN7	710 aa		33.28	■■■□□ 2.92
TM2D3-209	ENST00000560013	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
TM2D3-209	ENST00000560013	ZNF326	Q5BKZ1	582 aa	Known RBP	33.27	■■■□□ 2.92
TM2D3-209	ENST00000560013	CLTCL1	P53675	1640 aa		33.27	■■■□□ 2.92
TM2D3-209	ENST00000560013	KDM2A	Q9Y2K7	1162 aa		33.27	■■■□□ 2.92
TM2D3-209	ENST00000560013	ZC3H13	Q5T200	1668 aa	Known RBP	33.24	■■■□□ 2.91
TM2D3-209	ENST00000560013	SPATA31E1	Q6ZUB1	1445 aa		33.24	■■■□□ 2.91
TM2D3-209	ENST00000560013	HSPA5	P11021	654 aa	Known RBP	33.23	■■■□□ 2.91
TM2D3-209	ENST00000560013	CAMSAP1	Q5T5Y3	1602 aa		33.23	■■■□□ 2.91
TM2D3-209	ENST00000560013	NPAT	Q14207	1427 aa		33.21	■■■□□ 2.91
TM2D3-209	ENST00000560013	DNAJC5	Q9H3Z4	198 aa		33.21	■■■□□ 2.91
TM2D3-209	ENST00000560013	AGL	P35573	1532 aa		33.21	■■■□□ 2.91
TM2D3-209	ENST00000560013	RALGAPB	Q86X10	1494 aa		33.2	■■■□□ 2.91
TM2D3-209	ENST00000560013	ARHGEF40	Q8TER5	1519 aa		33.19	■■■□□ 2.9
TM2D3-209	ENST00000560013	CFAP65	Q6ZU64	1925 aa	Known RBP	33.18	■■■□□ 2.9
TM2D3-209	ENST00000560013	NEURL4	Q96JN8	1562 aa		33.16	■■■□□ 2.9
TM2D3-209	ENST00000560013	PRAG1	Q86YV5	1406 aa		33.15	■■■□□ 2.9
TM2D3-209	ENST00000560013	KIF1B	O60333	1816 aa		33.15	■■■□□ 2.9
TM2D3-209	ENST00000560013	ARHGAP31	Q2M1Z3	1444 aa		33.13	■■■□□ 2.89
TM2D3-209	ENST00000560013	TRH	P20396	242 aa	Predicted RBP	33.12	■■■□□ 2.89
TM2D3-209	ENST00000560013	UGGT1	Q9NYU2	1555 aa		33.12	■■■□□ 2.89
TM2D3-209	ENST00000560013	CNTLN	Q9NXG0	1405 aa		33.11	■■■□□ 2.89
TM2D3-209	ENST00000560013	SIGLEC1	Q9BZZ2	1709 aa		33.1	■■■□□ 2.89
TM2D3-209	ENST00000560013	TRPM1	Q7Z4N2	1603 aa		33.1	■■■□□ 2.89
TM2D3-209	ENST00000560013	MIER1	Q8N108	512 aa		33.08	■■■□□ 2.89
TM2D3-209	ENST00000560013	STAC3	Q96MF2	364 aa		33.08	■■■□□ 2.89
TM2D3-209	ENST00000560013	PPP6R1	Q9UPN7	881 aa		33.08	■■■□□ 2.89
TM2D3-209	ENST00000560013	DDX10	Q13206	875 aa	Known RBP	33.07	■■■□□ 2.88
TM2D3-209	ENST00000560013	NOS1	P29475	1434 aa		33.06	■■■□□ 2.88
TM2D3-209	ENST00000560013	CARD11	Q9BXL7	1154 aa		33.05	■■■□□ 2.88
TM2D3-209	ENST00000560013	USP47	Q96K76	1375 aa		33.04	■■■□□ 2.88
TM2D3-209	ENST00000560013	ROCK2	O75116	1388 aa	Known RBP	33.03	■■■□□ 2.88
TM2D3-209	ENST00000560013	MROH2A	A6NES4	1674 aa		33	■■■□□ 2.87
TM2D3-209	ENST00000560013	MADD	Q8WXG6	1647 aa		32.98	■■■□□ 2.87
TM2D3-209	ENST00000560013	SYNM	O15061	1565 aa		32.98	■■■□□ 2.87
TM2D3-209	ENST00000560013	ADGRB3	O60242	1522 aa		32.97	■■■□□ 2.87
TM2D3-209	ENST00000560013	PIK3C2B	O00750	1634 aa		32.97	■■■□□ 2.87
TM2D3-209	ENST00000560013	POLR1A	O95602	1720 aa	Predicted RBP	32.97	■■■□□ 2.87
TM2D3-209	ENST00000560013	WASHC2A	Q641Q2	1341 aa		32.97	■■■□□ 2.87
TM2D3-209	ENST00000560013	PREX1	Q8TCU6	1659 aa		32.96	■■■□□ 2.87
TM2D3-209	ENST00000560013	CLTC	Q00610	1675 aa	Known RBP	32.96	■■■□□ 2.87
TM2D3-209	ENST00000560013	GPRASP1	Q5JY77	1395 aa		32.95	■■■□□ 2.87
TM2D3-209	ENST00000560013	LAMC1	P11047	1609 aa		32.95	■■■□□ 2.87
TM2D3-209	ENST00000560013	IFT172	Q9UG01	1749 aa		32.95	■■■□□ 2.87
TM2D3-209	ENST00000560013	NBPF1	Q3BBV0	1214 aa		32.93	■■■□□ 2.86
TM2D3-209	ENST00000560013	MLEC	Q14165	292 aa		32.92	■■■□□ 2.86
TM2D3-209	ENST00000560013	C11orf95	C9JLR9	678 aa	Predicted RBP	32.91	■■■□□ 2.86
TM2D3-209	ENST00000560013	CHGA	P10645	457 aa	Known RBP	32.91	■■■□□ 2.86
TM2D3-209	ENST00000560013	MYOM2	P54296	1465 aa		32.9	■■■□□ 2.86
TM2D3-209	ENST00000560013	SLC52A1	Q9NWF4	448 aa		32.88	■■■□□ 2.85
TM2D3-209	ENST00000560013	CCDC7	Q96M83	1385 aa		32.88	■■■□□ 2.85
TM2D3-209	ENST00000560013	PPL	O60437	1756 aa		32.85	■■■□□ 2.85
TM2D3-209	ENST00000560013	KIAA1210	Q9ULL0	1709 aa		32.85	■■■□□ 2.85
TM2D3-209	ENST00000560013	ERVK-7	P63135	1459 aa		32.84	■■■□□ 2.85
TM2D3-209	ENST00000560013	IDI1	Q13907	227 aa		32.84	■■■□□ 2.85
TM2D3-209	ENST00000560013	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.83	■■■□□ 2.85
TM2D3-209	ENST00000560013	ST20-MTHFS	A0A0A6YYL1	179 aa		32.83	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms