RNA–Protein interactions for RNA: ENST00000559806.5

LRRC49-220, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-220ENST00000559806 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
LRRC49-220ENST00000559806 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
LRRC49-220ENST00000559806 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
LRRC49-220ENST00000559806 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
LRRC49-220ENST00000559806 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
LRRC49-220ENST00000559806 PDE4AP27815 886 aa11.44□□□□□ -0.58
LRRC49-220ENST00000559806 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
LRRC49-220ENST00000559806 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
LRRC49-220ENST00000559806 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
LRRC49-220ENST00000559806 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
LRRC49-220ENST00000559806 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
LRRC49-220ENST00000559806 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
LRRC49-220ENST00000559806 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
LRRC49-220ENST00000559806 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
LRRC49-220ENST00000559806 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
LRRC49-220ENST00000559806 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
LRRC49-220ENST00000559806 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
LRRC49-220ENST00000559806 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
LRRC49-220ENST00000559806 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
LRRC49-220ENST00000559806 PHF14O94880 888 aa11.32□□□□□ -0.6
LRRC49-220ENST00000559806 FAM98CQ17RN3 349 aaKnown RBP11.32□□□□□ -0.6
LRRC49-220ENST00000559806 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
LRRC49-220ENST00000559806 ZNF787Q6DD87 383 aa11.32□□□□□ -0.6
LRRC49-220ENST00000559806 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
LRRC49-220ENST00000559806 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
LRRC49-220ENST00000559806 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
LRRC49-220ENST00000559806 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
LRRC49-220ENST00000559806 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
LRRC49-220ENST00000559806 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
LRRC49-220ENST00000559806 MFSD10Q14728 455 aa11.26□□□□□ -0.61
LRRC49-220ENST00000559806 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
LRRC49-220ENST00000559806 PPP4CP60510 307 aa11.25□□□□□ -0.61
LRRC49-220ENST00000559806 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
LRRC49-220ENST00000559806 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
LRRC49-220ENST00000559806 MTRQ99707 1265 aa11.21□□□□□ -0.61
LRRC49-220ENST00000559806 EPAS1Q99814 870 aa11.21□□□□□ -0.61
LRRC49-220ENST00000559806 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
LRRC49-220ENST00000559806 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
LRRC49-220ENST00000559806 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
LRRC49-220ENST00000559806 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
LRRC49-220ENST00000559806 ZNF516Q92618 1163 aa11.19□□□□□ -0.62
LRRC49-220ENST00000559806 SMAPO00193 183 aa11.18□□□□□ -0.62
LRRC49-220ENST00000559806 SAMD7Q7Z3H4 446 aa11.17□□□□□ -0.62
LRRC49-220ENST00000559806 DDX12PQ92771 950 aa11.17□□□□□ -0.62
LRRC49-220ENST00000559806 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
LRRC49-220ENST00000559806 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
LRRC49-220ENST00000559806 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
LRRC49-220ENST00000559806 DPYSL4O14531 572 aa11.15□□□□□ -0.62
LRRC49-220ENST00000559806 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
LRRC49-220ENST00000559806 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
LRRC49-220ENST00000559806 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
LRRC49-220ENST00000559806 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
LRRC49-220ENST00000559806 MAP3K7O43318 606 aa11.09□□□□□ -0.63
LRRC49-220ENST00000559806 NBR1Q14596 966 aa11.08□□□□□ -0.64
LRRC49-220ENST00000559806 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
LRRC49-220ENST00000559806 RNF40O75150 1001 aa11.07□□□□□ -0.64
LRRC49-220ENST00000559806 APLP1P51693 650 aa11.06□□□□□ -0.64
LRRC49-220ENST00000559806 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
LRRC49-220ENST00000559806 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
LRRC49-220ENST00000559806 POTECB2RU33 542 aa11.05□□□□□ -0.64
LRRC49-220ENST00000559806 CAMK2BQ13554 666 aa11.04□□□□□ -0.64
LRRC49-220ENST00000559806 COPS2P61201 443 aa11.02□□□□□ -0.65
LRRC49-220ENST00000559806 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
LRRC49-220ENST00000559806 PRSS12P56730 875 aa11.01□□□□□ -0.65
LRRC49-220ENST00000559806 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
LRRC49-220ENST00000559806 TATDN2Q93075 761 aa11.01□□□□□ -0.65
LRRC49-220ENST00000559806 GGCXP38435 758 aa10.99□□□□□ -0.65
LRRC49-220ENST00000559806 MYT1Q01538 1121 aa10.99□□□□□ -0.65
LRRC49-220ENST00000559806 PKDCCQ504Y2 493 aa10.98□□□□□ -0.65
LRRC49-220ENST00000559806 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
LRRC49-220ENST00000559806 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
LRRC49-220ENST00000559806 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
LRRC49-220ENST00000559806 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
LRRC49-220ENST00000559806 SLC19A1P41440 591 aa10.94□□□□□ -0.66
LRRC49-220ENST00000559806 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
LRRC49-220ENST00000559806 TMUB1Q9BVT8 246 aa10.93□□□□□ -0.66
LRRC49-220ENST00000559806 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
LRRC49-220ENST00000559806 ZPR1O75312 459 aa10.91□□□□□ -0.66
LRRC49-220ENST00000559806 DGAT1O75907 488 aa10.91□□□□□ -0.66
LRRC49-220ENST00000559806 PDIA6Q15084 440 aa10.89□□□□□ -0.67
LRRC49-220ENST00000559806 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
LRRC49-220ENST00000559806 FAM187AA6NFU0 413 aa10.88□□□□□ -0.67
LRRC49-220ENST00000559806 SPRYD7Q5W111 196 aa10.88□□□□□ -0.67
LRRC49-220ENST00000559806 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
LRRC49-220ENST00000559806 CERKQ8TCT0 537 aa10.88□□□□□ -0.67
LRRC49-220ENST00000559806 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
LRRC49-220ENST00000559806 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
LRRC49-220ENST00000559806 LCE2AQ5TA79 106 aaPredicted RBP10.86□□□□□ -0.67
LRRC49-220ENST00000559806 TNFRSF10AO00220 468 aa10.85□□□□□ -0.67
LRRC49-220ENST00000559806 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
LRRC49-220ENST00000559806 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
LRRC49-220ENST00000559806 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
LRRC49-220ENST00000559806 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
LRRC49-220ENST00000559806 TLL1O43897 1013 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 PRR20EP86478 221 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 PRR20CP86479 221 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 PRR20DP86480 221 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 PRR20BP86481 221 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 PRR20AP86496 221 aa10.83□□□□□ -0.68
LRRC49-220ENST00000559806 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms