RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 PLA2R1Q13018 1463 aa30.02■■■□□ 2.4
CDC42BPB-206ENST00000559790 TCOF1Q13428 1488 aaKnown RBP30.02■■■□□ 2.4
CDC42BPB-206ENST00000559790 EIF2AK4Q9P2K8 1649 aaKnown RBP30.01■■■□□ 2.39
CDC42BPB-206ENST00000559790 POLR1AO95602 1720 aaPredicted RBP30.01■■■□□ 2.39
CDC42BPB-206ENST00000559790 MYOM3Q5VTT5 1437 aa30■■■□□ 2.39
CDC42BPB-206ENST00000559790 PZPP20742 1482 aa29.99■■■□□ 2.39
CDC42BPB-206ENST00000559790 ZC3H13Q5T200 1668 aaKnown RBP29.98■■■□□ 2.39
CDC42BPB-206ENST00000559790 PPP6R1Q9UPN7 881 aa29.97■■■□□ 2.39
CDC42BPB-206ENST00000559790 DMRT2Q9Y5R5 561 aa29.97■■■□□ 2.39
CDC42BPB-206ENST00000559790 A2ML1A8K2U0 1454 aa29.96■■■□□ 2.39
CDC42BPB-206ENST00000559790 CEP152O94986 1710 aa29.96■■■□□ 2.39
CDC42BPB-206ENST00000559790 NEURL4Q96JN8 1562 aa29.95■■■□□ 2.39
CDC42BPB-206ENST00000559790 MIA2Q96PC5 1412 aa29.95■■■□□ 2.38
CDC42BPB-206ENST00000559790 ABCC3O15438 1527 aa29.91■■■□□ 2.38
CDC42BPB-206ENST00000559790 RSPH4AQ5TD94 716 aa29.91■■■□□ 2.38
CDC42BPB-206ENST00000559790 PTPN23Q9H3S7 1636 aa29.91■■■□□ 2.38
CDC42BPB-206ENST00000559790 KIF3BO15066 747 aa29.9■■■□□ 2.38
CDC42BPB-206ENST00000559790 IQSEC2Q5JU85 1478 aa29.87■■■□□ 2.37
CDC42BPB-206ENST00000559790 NCKAP5LQ9HCH0 1330 aa29.87■■■□□ 2.37
CDC42BPB-206ENST00000559790 SPATA31D1Q6ZQQ2 1576 aa29.85■■■□□ 2.37
CDC42BPB-206ENST00000559790 CFAP65Q6ZU64 1925 aaKnown RBP29.84■■■□□ 2.37
CDC42BPB-206ENST00000559790 FBXO31Q5XUX0 539 aaPredicted RBP29.84■■■□□ 2.37
CDC42BPB-206ENST00000559790 TNRQ92752 1358 aa29.84■■■□□ 2.37
CDC42BPB-206ENST00000559790 SHANK2Q9UPX8 1470 aa29.84■■■□□ 2.37
CDC42BPB-206ENST00000559790 DEPDC5O75140 1603 aa29.83■■■□□ 2.37
CDC42BPB-206ENST00000559790 PRDM15P57071 1507 aaPredicted RBP29.82■■■□□ 2.36
CDC42BPB-206ENST00000559790 DUOX2Q9NRD8 1548 aa29.81■■■□□ 2.36
CDC42BPB-206ENST00000559790 ABCC5O15440 1437 aa29.79■■■□□ 2.36
CDC42BPB-206ENST00000559790 ZNF335Q9H4Z2 1342 aaPredicted RBP29.77■■■□□ 2.36
CDC42BPB-206ENST00000559790 NLRP1Q9C000 1473 aa29.76■■■□□ 2.35
CDC42BPB-206ENST00000559790 TSPY4P0CV99 314 aa29.76■■■□□ 2.35
CDC42BPB-206ENST00000559790 TSPY10P0CW01 314 aa29.76■■■□□ 2.35
CDC42BPB-206ENST00000559790 ERVK-7P63135 1459 aa29.75■■■□□ 2.35
CDC42BPB-206ENST00000559790 PKD2Q13563 968 aa29.75■■■□□ 2.35
CDC42BPB-206ENST00000559790 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
CDC42BPB-206ENST00000559790 UBR1Q8IWV7 1749 aa29.75■■■□□ 2.35
CDC42BPB-206ENST00000559790 WASHC2CQ9Y4E1 1318 aa29.73■■■□□ 2.35
CDC42BPB-206ENST00000559790 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
CDC42BPB-206ENST00000559790 DAPK1P53355 1430 aa29.72■■■□□ 2.35
CDC42BPB-206ENST00000559790 VWDEQ8N2E2 1590 aa29.71■■■□□ 2.35
CDC42BPB-206ENST00000559790 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.35
CDC42BPB-206ENST00000559790 ERBINQ96RT1 1412 aa29.69■■■□□ 2.34
CDC42BPB-206ENST00000559790 IQGAP1P46940 1657 aa29.69■■■□□ 2.34
CDC42BPB-206ENST00000559790 KIF15Q9NS87 1388 aa29.68■■■□□ 2.34
CDC42BPB-206ENST00000559790 MED14O60244 1454 aa29.67■■■□□ 2.34
CDC42BPB-206ENST00000559790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
CDC42BPB-206ENST00000559790 ARHGAP31Q2M1Z3 1444 aa29.6■■■□□ 2.33
CDC42BPB-206ENST00000559790 PIK3C2BO00750 1634 aa29.59■■■□□ 2.33
CDC42BPB-206ENST00000559790 ALKQ9UM73 1620 aa29.59■■■□□ 2.33
CDC42BPB-206ENST00000559790 ADGRL2O95490 1459 aa29.58■■■□□ 2.33
CDC42BPB-206ENST00000559790 CPS1P31327 1500 aa29.57■■■□□ 2.32
CDC42BPB-206ENST00000559790 LMTK2Q8IWU2 1503 aa29.57■■■□□ 2.32
CDC42BPB-206ENST00000559790 NPHP4O75161 1426 aaPredicted RBP29.55■■■□□ 2.32
CDC42BPB-206ENST00000559790 KDM5AP29375 1690 aaKnown RBP29.54■■■□□ 2.32
CDC42BPB-206ENST00000559790 SYNMO15061 1565 aa29.54■■■□□ 2.32
CDC42BPB-206ENST00000559790 ARHGAP23Q9P227 1491 aa29.54■■■□□ 2.32
CDC42BPB-206ENST00000559790 SLIT1O75093 1534 aa29.52■■■□□ 2.32
CDC42BPB-206ENST00000559790 RRP7BPQ9NSQ0 103 aa29.52■■■□□ 2.32
CDC42BPB-206ENST00000559790 EFCAB6Q5THR3 1501 aa29.51■■■□□ 2.32
CDC42BPB-206ENST00000559790 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
CDC42BPB-206ENST00000559790 THEMISQ8N1K5 641 aaPredicted RBP29.48■■■□□ 2.31
CDC42BPB-206ENST00000559790 APLP2Q06481 763 aa29.47■■■□□ 2.31
CDC42BPB-206ENST00000559790 ANKLE2Q86XL3 938 aa29.46■■■□□ 2.31
CDC42BPB-206ENST00000559790 MYO5BQ9ULV0 1848 aa29.45■■■□□ 2.31
CDC42BPB-206ENST00000559790 ANKRD30AQ9BXX3 1397 aa29.45■■■□□ 2.31
CDC42BPB-206ENST00000559790 SCAF11Q99590 1463 aaKnown RBP29.44■■■□□ 2.3
CDC42BPB-206ENST00000559790 UNC13BO14795 1591 aa29.42■■■□□ 2.3
CDC42BPB-206ENST00000559790 CHIC2Q9UKJ5 165 aa29.41■■■□□ 2.3
CDC42BPB-206ENST00000559790 TET3O43151 1660 aa29.4■■■□□ 2.3
CDC42BPB-206ENST00000559790 UBAP1LF5GYI3 381 aa29.4■■■□□ 2.3
CDC42BPB-206ENST00000559790 GCC2Q8IWJ2 1684 aa29.4■■■□□ 2.3
CDC42BPB-206ENST00000559790 NOS1P29475 1434 aa29.39■■■□□ 2.3
CDC42BPB-206ENST00000559790 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.3
CDC42BPB-206ENST00000559790 ADGRB3O60242 1522 aa29.35■■■□□ 2.29
CDC42BPB-206ENST00000559790 DISP3Q9P2K9 1392 aa29.35■■■□□ 2.29
CDC42BPB-206ENST00000559790 LTKP29376 864 aa29.34■■■□□ 2.29
CDC42BPB-206ENST00000559790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.34■■■□□ 2.29
CDC42BPB-206ENST00000559790 ILDR2Q71H61 639 aa29.33■■■□□ 2.29
CDC42BPB-206ENST00000559790 E9PCH4 1651 aa29.32■■■□□ 2.28
CDC42BPB-206ENST00000559790 ANKRD50Q9ULJ7 1429 aa29.32■■■□□ 2.28
CDC42BPB-206ENST00000559790 KANK1Q14678 1352 aa29.32■■■□□ 2.28
CDC42BPB-206ENST00000559790 TMEM2Q9UHN6 1383 aa29.29■■■□□ 2.28
CDC42BPB-206ENST00000559790 IQGAP3Q86VI3 1631 aa29.28■■■□□ 2.28
CDC42BPB-206ENST00000559790 RPRD2Q5VT52 1461 aaKnown RBP29.28■■■□□ 2.28
CDC42BPB-206ENST00000559790 TMEM131LA2VDJ0 1609 aa29.25■■■□□ 2.27
CDC42BPB-206ENST00000559790 FAM50AQ14320 339 aaKnown RBP29.25■■■□□ 2.27
CDC42BPB-206ENST00000559790 MED1Q15648 1581 aaPredicted RBP29.23■■■□□ 2.27
CDC42BPB-206ENST00000559790 IDI1Q13907 227 aa29.23■■■□□ 2.27
CDC42BPB-206ENST00000559790 NWD1Q149M9 1564 aa29.22■■■□□ 2.27
CDC42BPB-206ENST00000559790 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
CDC42BPB-206ENST00000559790 ROCK1Q13464 1354 aa29.18■■■□□ 2.26
CDC42BPB-206ENST00000559790 HSPA1LP34931 641 aa29.18■■■□□ 2.26
CDC42BPB-206ENST00000559790 ZFYVE9O95405 1425 aa29.18■■■□□ 2.26
CDC42BPB-206ENST00000559790 PIP4K2BP78356 416 aa29.15■■■□□ 2.26
CDC42BPB-206ENST00000559790 CHD2O14647 1828 aaKnown RBP29.15■■■□□ 2.26
CDC42BPB-206ENST00000559790 TOM1O60784 492 aa29.14■■■□□ 2.26
CDC42BPB-206ENST00000559790 SCAF1Q9H7N4 1312 aaKnown RBP29.09■■■□□ 2.25
CDC42BPB-206ENST00000559790 SPHKAPQ2M3C7 1700 aa29.08■■■□□ 2.25
CDC42BPB-206ENST00000559790 EID1Q9Y6B2 187 aa29.07■■■□□ 2.24
CDC42BPB-206ENST00000559790 NKTRP30414 1462 aaKnown RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms