RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PCDHGA10Q9Y5H3 936 aa9.24□□□□□ -0.93
CASC4-210ENST00000559550 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
CASC4-210ENST00000559550 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
CASC4-210ENST00000559550 DCAF8L2P0C7V8 631 aa9.22□□□□□ -0.93
CASC4-210ENST00000559550 ZFRQ96KR1 1074 aaKnown RBP9.22□□□□□ -0.93
CASC4-210ENST00000559550 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
CASC4-210ENST00000559550 GFRA3O60609 400 aa9.19□□□□□ -0.94
CASC4-210ENST00000559550 PDE4AP27815 886 aa9.19□□□□□ -0.94
CASC4-210ENST00000559550 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
CASC4-210ENST00000559550 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
CASC4-210ENST00000559550 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
CASC4-210ENST00000559550 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
CASC4-210ENST00000559550 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
CASC4-210ENST00000559550 TYW1BQ6NUM6 668 aa9.15□□□□□ -0.94
CASC4-210ENST00000559550 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
CASC4-210ENST00000559550 PHF14O94880 888 aa9.14□□□□□ -0.95
CASC4-210ENST00000559550 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
CASC4-210ENST00000559550 MFSD10Q14728 455 aa9.14□□□□□ -0.95
CASC4-210ENST00000559550 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
CASC4-210ENST00000559550 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
CASC4-210ENST00000559550 NRG2O14511 850 aaPredicted RBP9.12□□□□□ -0.95
CASC4-210ENST00000559550 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
CASC4-210ENST00000559550 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
CASC4-210ENST00000559550 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
CASC4-210ENST00000559550 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
CASC4-210ENST00000559550 C6orf132Q5T0Z8 1188 aa9.1□□□□□ -0.95
CASC4-210ENST00000559550 RYDENQ9NUL5 291 aaKnown RBP9.1□□□□□ -0.95
CASC4-210ENST00000559550 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.1□□□□□ -0.95
CASC4-210ENST00000559550 HPS5Q9UPZ3 1129 aa9.1□□□□□ -0.95
CASC4-210ENST00000559550 PRKD2Q9BZL6 878 aa9.09□□□□□ -0.95
CASC4-210ENST00000559550 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
CASC4-210ENST00000559550 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
CASC4-210ENST00000559550 V9GY48 417 aaPredicted RBP9.05□□□□□ -0.96
CASC4-210ENST00000559550 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
CASC4-210ENST00000559550 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
CASC4-210ENST00000559550 EPAS1Q99814 870 aa9.04□□□□□ -0.96
CASC4-210ENST00000559550 GTPBP6O43824 516 aaPredicted RBP9.03□□□□□ -0.96
CASC4-210ENST00000559550 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
CASC4-210ENST00000559550 TSKSQ9UJT2 592 aa9.01□□□□□ -0.97
CASC4-210ENST00000559550 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
CASC4-210ENST00000559550 PPP4CP60510 307 aa8.99□□□□□ -0.97
CASC4-210ENST00000559550 MTRQ99707 1265 aa8.99□□□□□ -0.97
CASC4-210ENST00000559550 CAMK2BQ13554 666 aa8.97□□□□□ -0.97
CASC4-210ENST00000559550 RBM33Q96EV2 1170 aaKnown RBP8.97□□□□□ -0.97
CASC4-210ENST00000559550 IL21Q9HBE4 155 aa8.97□□□□□ -0.97
CASC4-210ENST00000559550 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
CASC4-210ENST00000559550 ZNF516Q92618 1163 aa8.96□□□□□ -0.98
CASC4-210ENST00000559550 PDZRN3Q9UPQ7 1066 aa8.96□□□□□ -0.98
CASC4-210ENST00000559550 SAMD7Q7Z3H4 446 aa8.95□□□□□ -0.98
CASC4-210ENST00000559550 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
CASC4-210ENST00000559550 PACS2Q86VP3 889 aa8.94□□□□□ -0.98
CASC4-210ENST00000559550 C3orf80F5H4A9 247 aa8.93□□□□□ -0.98
CASC4-210ENST00000559550 DPYSL4O14531 572 aa8.93□□□□□ -0.98
CASC4-210ENST00000559550 TSR1Q2NL82 804 aaKnown RBP8.93□□□□□ -0.98
CASC4-210ENST00000559550 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
CASC4-210ENST00000559550 SMAPO00193 183 aa8.92□□□□□ -0.98
CASC4-210ENST00000559550 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
CASC4-210ENST00000559550 EN1Q05925 392 aaPredicted RBP8.91□□□□□ -0.98
CASC4-210ENST00000559550 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
CASC4-210ENST00000559550 DDX12PQ92771 950 aa8.91□□□□□ -0.98
CASC4-210ENST00000559550 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
CASC4-210ENST00000559550 PAXIP1Q6ZW49 1069 aaPredicted RBP8.9□□□□□ -0.98
CASC4-210ENST00000559550 APLP1P51693 650 aa8.88□□□□□ -0.99
CASC4-210ENST00000559550 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
CASC4-210ENST00000559550 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
CASC4-210ENST00000559550 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
CASC4-210ENST00000559550 POTECB2RU33 542 aa8.85□□□□□ -0.99
CASC4-210ENST00000559550 MAP3K7O43318 606 aa8.85□□□□□ -0.99
CASC4-210ENST00000559550 PRSS12P56730 875 aa8.85□□□□□ -0.99
CASC4-210ENST00000559550 PLCB2Q00722 1185 aa8.85□□□□□ -0.99
CASC4-210ENST00000559550 NBR1Q14596 966 aa8.85□□□□□ -0.99
CASC4-210ENST00000559550 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
CASC4-210ENST00000559550 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
CASC4-210ENST00000559550 TATDN2Q93075 761 aa8.84□□□□□ -0.99
CASC4-210ENST00000559550 PRIM1P49642 420 aaKnown RBP8.83□□□□□ -1
CASC4-210ENST00000559550 MYT1Q01538 1121 aa8.83□□□□□ -1
CASC4-210ENST00000559550 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
CASC4-210ENST00000559550 PNMA3Q9UL41 463 aa8.82□□□□□ -1
CASC4-210ENST00000559550 PDIA6Q15084 440 aa8.8□□□□□ -1
CASC4-210ENST00000559550 NBPF26B4DH59 902 aa8.79□□□□□ -1
CASC4-210ENST00000559550 DGAT1O75907 488 aa8.79□□□□□ -1
CASC4-210ENST00000559550 GGCXP38435 758 aa8.79□□□□□ -1
CASC4-210ENST00000559550 CERKQ8TCT0 537 aa8.79□□□□□ -1
CASC4-210ENST00000559550 COPS2P61201 443 aa8.78□□□□□ -1
CASC4-210ENST00000559550 ZPR1O75312 459 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 PRR20EP86478 221 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 PRR20CP86479 221 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 PRR20DP86480 221 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 PRR20BP86481 221 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 PRR20AP86496 221 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1.01
CASC4-210ENST00000559550 RNF223E7ERA6 249 aa8.76□□□□□ -1.01
CASC4-210ENST00000559550 SLC19A1P41440 591 aa8.76□□□□□ -1.01
CASC4-210ENST00000559550 PKDCCQ504Y2 493 aa8.76□□□□□ -1.01
CASC4-210ENST00000559550 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
CASC4-210ENST00000559550 RNF40O75150 1001 aa8.75□□□□□ -1.01
CASC4-210ENST00000559550 SPRYD7Q5W111 196 aa8.75□□□□□ -1.01
CASC4-210ENST00000559550 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
CASC4-210ENST00000559550 SWT1Q5T5J6 900 aaKnown RBP8.73□□□□□ -1.01
CASC4-210ENST00000559550 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms