RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 FBXO31Q5XUX0 539 aaPredicted RBP32.34■■■□□ 2.77
TSPAN3-206ENST00000559373 MYOM3Q5VTT5 1437 aa32.32■■■□□ 2.76
TSPAN3-206ENST00000559373 KDM5DQ9BY66 1539 aa32.31■■■□□ 2.76
TSPAN3-206ENST00000559373 MAST1Q9Y2H9 1570 aa32.3■■■□□ 2.76
TSPAN3-206ENST00000559373 WASHC2CQ9Y4E1 1318 aa32.29■■■□□ 2.76
TSPAN3-206ENST00000559373 DNMT1P26358 1616 aaKnown RBP32.29■■■□□ 2.76
TSPAN3-206ENST00000559373 LTBP4Q8N2S1 1624 aa32.28■■■□□ 2.76
TSPAN3-206ENST00000559373 APLP2Q06481 763 aa32.25■■■□□ 2.75
TSPAN3-206ENST00000559373 CEP152O94986 1710 aa32.25■■■□□ 2.75
TSPAN3-206ENST00000559373 MIA2Q96PC5 1412 aa32.24■■■□□ 2.75
TSPAN3-206ENST00000559373 PTPN23Q9H3S7 1636 aa32.23■■■□□ 2.75
TSPAN3-206ENST00000559373 CROCC2H7BZ55 1655 aa32.23■■■□□ 2.75
TSPAN3-206ENST00000559373 A2ML1A8K2U0 1454 aa32.23■■■□□ 2.75
TSPAN3-206ENST00000559373 RNF17Q9BXT8 1623 aaKnown RBP32.22■■■□□ 2.75
TSPAN3-206ENST00000559373 POLR1AO95602 1720 aaPredicted RBP32.22■■■□□ 2.75
TSPAN3-206ENST00000559373 PZPP20742 1482 aa32.22■■■□□ 2.75
TSPAN3-206ENST00000559373 TNRQ92752 1358 aa32.2■■■□□ 2.75
TSPAN3-206ENST00000559373 PLA2R1Q13018 1463 aa32.2■■■□□ 2.75
TSPAN3-206ENST00000559373 ZNF335Q9H4Z2 1342 aaPredicted RBP32.19■■■□□ 2.74
TSPAN3-206ENST00000559373 EIF2AK4Q9P2K8 1649 aaKnown RBP32.18■■■□□ 2.74
TSPAN3-206ENST00000559373 TCOF1Q13428 1488 aaKnown RBP32.17■■■□□ 2.74
TSPAN3-206ENST00000559373 FAM135AQ9P2D6 1515 aa32.16■■■□□ 2.74
TSPAN3-206ENST00000559373 MROH1Q8NDA8 1641 aa32.15■■■□□ 2.74
TSPAN3-206ENST00000559373 PKD2Q13563 968 aa32.15■■■□□ 2.74
TSPAN3-206ENST00000559373 ABCC3O15438 1527 aa32.14■■■□□ 2.74
TSPAN3-206ENST00000559373 ZC3H13Q5T200 1668 aaKnown RBP32.14■■■□□ 2.74
TSPAN3-206ENST00000559373 ABCC5O15440 1437 aa32.11■■■□□ 2.73
TSPAN3-206ENST00000559373 RRP7BPQ9NSQ0 103 aa32.1■■■□□ 2.73
TSPAN3-206ENST00000559373 DUOX2Q9NRD8 1548 aa32.1■■■□□ 2.73
TSPAN3-206ENST00000559373 NEURL4Q96JN8 1562 aa32.08■■■□□ 2.73
TSPAN3-206ENST00000559373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.07■■■□□ 2.72
TSPAN3-206ENST00000559373 FGD6Q6ZV73 1430 aa32.06■■■□□ 2.72
TSPAN3-206ENST00000559373 UGGT1Q9NYU2 1555 aa32.05■■■□□ 2.72
TSPAN3-206ENST00000559373 KIF15Q9NS87 1388 aa32.05■■■□□ 2.72
TSPAN3-206ENST00000559373 DAPK1P53355 1430 aa32.04■■■□□ 2.72
TSPAN3-206ENST00000559373 CHIC2Q9UKJ5 165 aa32.04■■■□□ 2.72
TSPAN3-206ENST00000559373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.01■■■□□ 2.71
TSPAN3-206ENST00000559373 NLRP1Q9C000 1473 aa32.01■■■□□ 2.71
TSPAN3-206ENST00000559373 SHANK2Q9UPX8 1470 aa32.01■■■□□ 2.71
TSPAN3-206ENST00000559373 SPATA31D1Q6ZQQ2 1576 aa32.01■■■□□ 2.71
TSPAN3-206ENST00000559373 ERVK-7P63135 1459 aa31.98■■■□□ 2.71
TSPAN3-206ENST00000559373 IQSEC2Q5JU85 1478 aa31.98■■■□□ 2.71
TSPAN3-206ENST00000559373 THEMISQ8N1K5 641 aaPredicted RBP31.97■■■□□ 2.71
TSPAN3-206ENST00000559373 ANKLE2Q86XL3 938 aa31.96■■■□□ 2.71
TSPAN3-206ENST00000559373 UBR1Q8IWV7 1749 aa31.95■■■□□ 2.71
TSPAN3-206ENST00000559373 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
TSPAN3-206ENST00000559373 DEPDC5O75140 1603 aa31.93■■■□□ 2.7
TSPAN3-206ENST00000559373 ERBINQ96RT1 1412 aa31.92■■■□□ 2.7
TSPAN3-206ENST00000559373 UBAP1LF5GYI3 381 aa31.92■■■□□ 2.7
TSPAN3-206ENST00000559373 IQGAP1P46940 1657 aa31.92■■■□□ 2.7
TSPAN3-206ENST00000559373 FAM50AQ14320 339 aaKnown RBP31.9■■■□□ 2.7
TSPAN3-206ENST00000559373 STRCP1A6NGW2 1772 aa31.88■■■□□ 2.69
TSPAN3-206ENST00000559373 NPHP4O75161 1426 aaPredicted RBP31.87■■■□□ 2.69
TSPAN3-206ENST00000559373 ANKRD30AQ9BXX3 1397 aa31.86■■■□□ 2.69
TSPAN3-206ENST00000559373 VWDEQ8N2E2 1590 aa31.85■■■□□ 2.69
TSPAN3-206ENST00000559373 PIK3C2BO00750 1634 aa31.83■■■□□ 2.69
TSPAN3-206ENST00000559373 MED14O60244 1454 aa31.82■■■□□ 2.68
TSPAN3-206ENST00000559373 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
TSPAN3-206ENST00000559373 KANK1Q14678 1352 aa31.8■■■□□ 2.68
TSPAN3-206ENST00000559373 ARHGAP31Q2M1Z3 1444 aa31.78■■■□□ 2.68
TSPAN3-206ENST00000559373 CPS1P31327 1500 aa31.78■■■□□ 2.68
TSPAN3-206ENST00000559373 SCAF1Q9H7N4 1312 aaKnown RBP31.77■■■□□ 2.68
TSPAN3-206ENST00000559373 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
TSPAN3-206ENST00000559373 PIP4K2BP78356 416 aa31.75■■■□□ 2.67
TSPAN3-206ENST00000559373 ADGRL2O95490 1459 aa31.74■■■□□ 2.67
TSPAN3-206ENST00000559373 LTKP29376 864 aa31.73■■■□□ 2.67
TSPAN3-206ENST00000559373 MYO5BQ9ULV0 1848 aa31.72■■■□□ 2.67
TSPAN3-206ENST00000559373 SYNMO15061 1565 aa31.71■■■□□ 2.67
TSPAN3-206ENST00000559373 TXNDC2Q86VQ3 553 aa31.7■■■□□ 2.67
TSPAN3-206ENST00000559373 SCAF11Q99590 1463 aaKnown RBP31.7■■■□□ 2.66
TSPAN3-206ENST00000559373 LMTK2Q8IWU2 1503 aa31.69■■■□□ 2.66
TSPAN3-206ENST00000559373 ILDR2Q71H61 639 aa31.68■■■□□ 2.66
TSPAN3-206ENST00000559373 STAG3Q9UJ98 1225 aa31.68■■■□□ 2.66
TSPAN3-206ENST00000559373 EFCAB6Q5THR3 1501 aa31.68■■■□□ 2.66
TSPAN3-206ENST00000559373 ARHGAP23Q9P227 1491 aa31.67■■■□□ 2.66
TSPAN3-206ENST00000559373 SLIT1O75093 1534 aa31.67■■■□□ 2.66
TSPAN3-206ENST00000559373 ANKRD50Q9ULJ7 1429 aa31.66■■■□□ 2.66
TSPAN3-206ENST00000559373 IDI1Q13907 227 aa31.65■■■□□ 2.66
TSPAN3-206ENST00000559373 XIRP1Q702N8 1843 aaKnown RBP31.64■■■□□ 2.66
TSPAN3-206ENST00000559373 TOM1O60784 492 aa31.62■■■□□ 2.65
TSPAN3-206ENST00000559373 ALKQ9UM73 1620 aa31.62■■■□□ 2.65
TSPAN3-206ENST00000559373 KDM5AP29375 1690 aaKnown RBP31.61■■■□□ 2.65
TSPAN3-206ENST00000559373 LRRC7Q96NW7 1537 aa31.61■■■□□ 2.65
TSPAN3-206ENST00000559373 ITGAEP38570 1179 aa31.61■■■□□ 2.65
TSPAN3-206ENST00000559373 SENP3Q9H4L4 574 aaPredicted RBP31.6■■■□□ 2.65
TSPAN3-206ENST00000559373 EID1Q9Y6B2 187 aa31.6■■■□□ 2.65
TSPAN3-206ENST00000559373 HSPA1LP34931 641 aa31.59■■■□□ 2.65
TSPAN3-206ENST00000559373 TET3O43151 1660 aa31.59■■■□□ 2.65
TSPAN3-206ENST00000559373 TMEM2Q9UHN6 1383 aa31.58■■■□□ 2.65
TSPAN3-206ENST00000559373 GCC2Q8IWJ2 1684 aa31.58■■■□□ 2.65
TSPAN3-206ENST00000559373 NOS1P29475 1434 aa31.57■■■□□ 2.64
TSPAN3-206ENST00000559373 UNC13BO14795 1591 aa31.55■■■□□ 2.64
TSPAN3-206ENST00000559373 ADGRB3O60242 1522 aa31.54■■■□□ 2.64
TSPAN3-206ENST00000559373 E9PCH4 1651 aa31.54■■■□□ 2.64
TSPAN3-206ENST00000559373 SLC26A8Q96RN1 970 aa31.48■■■□□ 2.63
TSPAN3-206ENST00000559373 RPRD2Q5VT52 1461 aaKnown RBP31.46■■■□□ 2.63
TSPAN3-206ENST00000559373 SLC52A1Q9NWF4 448 aa31.44■■■□□ 2.62
TSPAN3-206ENST00000559373 IQGAP3Q86VI3 1631 aa31.44■■■□□ 2.62
TSPAN3-206ENST00000559373 TMEM131LA2VDJ0 1609 aa31.43■■■□□ 2.62
TSPAN3-206ENST00000559373 BCANQ96GW7 911 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms